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The map label for this gene is ycbL [H]

Identifier: 87200383

GI number: 87200383

Start: 2516920

End: 2517657

Strand: Reverse

Name: ycbL [H]

Synonym: Saro_2370

Alternate gene names: 87200383

Gene position: 2517657-2516920 (Counterclockwise)

Preceding gene: 87200384

Following gene: 87200381

Centisome position: 70.69

GC content: 61.11

Gene sequence:

>738_bases
ATGCGCCGCACTTACCAATGCAATTGCCGGGGCATTGCAATTGCCGGTCCATGCCTCCAAATCGCGAGCATGACACAGCA
AGCAGCCGAACCGCCATTCCGCGTGGCGATCATTCCCGTCACGCCGCTCGAACAGAACTGCACGCTCGTGTGGTGCACGA
AGACGATGAAGGGCGCGTTCATCGATGCCGGTGGCGATCTCGAAAAGCTGCGCAAGGCCGTCGAGAAGACCGGCGTGACG
ATCGAGAAACTGCTCGTAACTCACGGCCATATCGACCACTGCGGCATGACGGGCATTCTGGCCAAGGAACTCGGCGTACC
CATCGAAGGCCCGCACGAGGCTGACCGCTTCTGGATTTCCCGCCTCGACGAGGATGGGCGCCGCTGGGGCATCACCGGCG
AGGTGTTCGAGCCTACGCGCTGGTTGTCCGATGGGGACAAGGTGACGGTCGGCGAGGTCGAACTCGACGTGATCCACTGC
CCCGGTCACACCCCGGGCCATGTCGTTTTTCATTATGCGCCCTCGCGCGTGGCGATCGTGGGCGACGTTCTCTTCCAGGG
ATCAATTGGCCGCACCGACTTCCCCATGGGAAATCACCAGGACCTGATCGATTCGATCACCGGAAAACTGTGGCCGCTCG
GCAACGATGTCACTTTCGTTCCGGGGCATGGCCCCAACAGCACGTTTGGTCGTGAGCGCCAGACCAATGCCTATGTCAGC
GATTATGCGCTGAGCTGA

Upstream 100 bases:

>100_bases
GAAGTGATGCGTCGCATCGACGGATGAAGCCCAGCTTCCGACGACCCGGCCGCCAACCGCAGATGGTGGAGATGCGGATT
GAAAGCATGTACCCAGGCTG

Downstream 100 bases:

>100_bases
GCCTTTTCTTTCTCGGGCGCAGAGGGTGTGGGAAGGCAGGGCGAACCATGCCTTCCCGCACCGATCACATGTCCAGCGCG
ATCGACACCGCCCATACGCC

Product: beta-lactamase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MRRTYQCNCRGIAIAGPCLQIASMTQQAAEPPFRVAIIPVTPLEQNCTLVWCTKTMKGAFIDAGGDLEKLRKAVEKTGVT
IEKLLVTHGHIDHCGMTGILAKELGVPIEGPHEADRFWISRLDEDGRRWGITGEVFEPTRWLSDGDKVTVGEVELDVIHC
PGHTPGHVVFHYAPSRVAIVGDVLFQGSIGRTDFPMGNHQDLIDSITGKLWPLGNDVTFVPGHGPNSTFGRERQTNAYVS
DYALS

Sequences:

>Translated_245_residues
MRRTYQCNCRGIAIAGPCLQIASMTQQAAEPPFRVAIIPVTPLEQNCTLVWCTKTMKGAFIDAGGDLEKLRKAVEKTGVT
IEKLLVTHGHIDHCGMTGILAKELGVPIEGPHEADRFWISRLDEDGRRWGITGEVFEPTRWLSDGDKVTVGEVELDVIHC
PGHTPGHVVFHYAPSRVAIVGDVLFQGSIGRTDFPMGNHQDLIDSITGKLWPLGNDVTFVPGHGPNSTFGRERQTNAYVS
DYALS
>Mature_245_residues
MRRTYQCNCRGIAIAGPCLQIASMTQQAAEPPFRVAIIPVTPLEQNCTLVWCTKTMKGAFIDAGGDLEKLRKAVEKTGVT
IEKLLVTHGHIDHCGMTGILAKELGVPIEGPHEADRFWISRLDEDGRRWGITGEVFEPTRWLSDGDKVTVGEVELDVIHC
PGHTPGHVVFHYAPSRVAIVGDVLFQGSIGRTDFPMGNHQDLIDSITGKLWPLGNDVTFVPGHGPNSTFGRERQTNAYVS
DYALS

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Escherichia coli, GI1787158, Length=206, Percent_Identity=49.5145631067961, Blast_Score=226, Evalue=9e-61,
Organism=Caenorhabditis elegans, GI17538952, Length=90, Percent_Identity=36.6666666666667, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 26858; Mature: 26858

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTYQCNCRGIAIAGPCLQIASMTQQAAEPPFRVAIIPVTPLEQNCTLVWCTKTMKGAF
CCCCEECCCCEEEEECHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCCEE
IDAGGDLEKLRKAVEKTGVTIEKLLVTHGHIDHCGMTGILAKELGVPIEGPHEADRFWIS
EECCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHH
RLDEDGRRWGITGEVFEPTRWLSDGDKVTVGEVELDVIHCPGHTPGHVVFHYAPSRVAIV
HCCCCCCEECCCCCCCCCHHHCCCCCEEEEEEEEEEEEECCCCCCCEEEEEECCCEEEEE
GDVLFQGSIGRTDFPMGNHQDLIDSITGKLWPLGNDVTFVPGHGPNSTFGRERQTNAYVS
EHEEECCCCCCCCCCCCCHHHHHHHHCCCEEECCCCEEEECCCCCCCCCCCCCCCCCEEE
DYALS
CEECC
>Mature Secondary Structure
MRRTYQCNCRGIAIAGPCLQIASMTQQAAEPPFRVAIIPVTPLEQNCTLVWCTKTMKGAF
CCCCEECCCCEEEEECHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCCEE
IDAGGDLEKLRKAVEKTGVTIEKLLVTHGHIDHCGMTGILAKELGVPIEGPHEADRFWIS
EECCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHH
RLDEDGRRWGITGEVFEPTRWLSDGDKVTVGEVELDVIHCPGHTPGHVVFHYAPSRVAIV
HCCCCCCEECCCCCCCCCHHHCCCCCEEEEEEEEEEEEECCCCCCCEEEEEECCCEEEEE
GDVLFQGSIGRTDFPMGNHQDLIDSITGKLWPLGNDVTFVPGHGPNSTFGRERQTNAYVS
EHEEECCCCCCCCCCCCCHHHHHHHHCCCEEECCCCEEEECCCCCCCCCCCCCCCCCEEE
DYALS
CEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]