Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199812
Identifier: 87199812
GI number: 87199812
Start: 1893193
End: 1893585
Strand: Reverse
Name: 87199812
Synonym: Saro_1795
Alternate gene names: NA
Gene position: 1893585-1893193 (Counterclockwise)
Preceding gene: 87199813
Following gene: 87199806
Centisome position: 53.17
GC content: 66.41
Gene sequence:
>393_bases ATGGCTTCGGGCACGACAGGTCGGCGGATCAGGGCATGGGCGCGGGACATCAAGCGTGATGTCGTCGCGTTGTGGCTGGC CGCGCGGGACCCGCGCGTACCGGTCGCGGCGAAGATCGTTTCCGGGATCGTCGCGGCCTATGCCCTTTCGCCCATCGACC TGATACCGGACTTCATTCCGGTGATCGGCTACCTCGACGACGTGATCCTCGTGCCACTGGGCATCCTGCTGGCGATCCGG CTGATTCCTGCAGGGGTCATGGCGCAGTTGCGCGAGCAGGCGCTGAAGGTTGGACGGCCGCGATCGGCTGCAGGACTGGT CGCCATCCTGCTTGTCTGGATCGCGGGCGTGACGGCACTGGGATGGTGGCTGTGGGGACGCATGCCCGGGTAA
Upstream 100 bases:
>100_bases GCCGTGGTCAGTCTGCGCAAGAGCGTCGACGAGGCGGCGCGCTTCGTCGGGTTCGACTAGGCGCAGTTGCCTTTCCCCTC CCCGGCCCCATCTGGAACTC
Downstream 100 bases:
>100_bases CGCCGCACCCTGCAACGAAAAGGCCCCGCCTTTCGGCAGGGCCTTTCCTTGTCTCATTCAGGCTTGCGCGGTTCAGCGCA GCGAGACGACGTTGTCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MASGTTGRRIRAWARDIKRDVVALWLAARDPRVPVAAKIVSGIVAAYALSPIDLIPDFIPVIGYLDDVILVPLGILLAIR LIPAGVMAQLREQALKVGRPRSAAGLVAILLVWIAGVTALGWWLWGRMPG
Sequences:
>Translated_130_residues MASGTTGRRIRAWARDIKRDVVALWLAARDPRVPVAAKIVSGIVAAYALSPIDLIPDFIPVIGYLDDVILVPLGILLAIR LIPAGVMAQLREQALKVGRPRSAAGLVAILLVWIAGVTALGWWLWGRMPG >Mature_129_residues ASGTTGRRIRAWARDIKRDVVALWLAARDPRVPVAAKIVSGIVAAYALSPIDLIPDFIPVIGYLDDVILVPLGILLAIRL IPAGVMAQLREQALKVGRPRSAAGLVAILLVWIAGVTALGWWLWGRMPG
Specific function: Unknown
COG id: COG3339
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13980; Mature: 13849
Theoretical pI: Translated: 11.64; Mature: 11.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGTTGRRIRAWARDIKRDVVALWLAARDPRVPVAAKIVSGIVAAYALSPIDLIPDFIP CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH VIGYLDDVILVPLGILLAIRLIPAGVMAQLREQALKVGRPRSAAGLVAILLVWIAGVTAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH GWWLWGRMPG HHHHHHCCCC >Mature Secondary Structure ASGTTGRRIRAWARDIKRDVVALWLAARDPRVPVAAKIVSGIVAAYALSPIDLIPDFIP CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH VIGYLDDVILVPLGILLAIRLIPAGVMAQLREQALKVGRPRSAAGLVAILLVWIAGVTAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH GWWLWGRMPG HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA