Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199805
Identifier: 87199805
GI number: 87199805
Start: 1886619
End: 1887047
Strand: Reverse
Name: 87199805
Synonym: Saro_1788
Alternate gene names: NA
Gene position: 1887047-1886619 (Counterclockwise)
Preceding gene: 87199806
Following gene: 87199797
Centisome position: 52.98
GC content: 64.34
Gene sequence:
>429_bases ATGAAAGTGGCAGCAATCCTGCAACCGGCCGTCGCGTTGATGGCTTGGACCATGGTCATGTGGCTGTGGATGTACGCGAC CCGCATCCCCGCGATGAGCGCGGCAAAGCTCGATCCGGATTCGCTGGCGCGCGACCCGTCCCGGACGCTCGACGACATCC TGCCCGCCAACGTCCAGTGGAAGGCGCACAACTACAACCATCTCCACGAAGCGCCGACGCTGTTCTACGCAGCGGTGCTG GTCATCGCGCTTGTCGGACAGGGCAACGGGACGAGCGCGAGCGTGGCCTGGGCCTATGTCGGCCTGCGCGTGGTGCATTC GCTGGTGCAGGCGACGGTCAACAAGGTCGTCGTGCGCTTCTCGCTGTTCGGGCTTTCCTCGATCGCGCTCATGGCGCTGA TCTACCACGCGGCAAGGCTGGTGTTCTGA
Upstream 100 bases:
>100_bases CTGTCCACCACATGCCTGATCGTGCTGGCCATCCGCGCACTGGGAGCGACGATGGGCCACATGTAACGCCATTGACGATG ACAAGAGGGGGAGAATGACG
Downstream 100 bases:
>100_bases CCGGTCAGTCGCGGATGAACAGGCTGGCCAGTTCGACGTGGGTCGACCACCGGAACTGGCCAACTGGGCGCACTTCCGCC AGCCTGTAGCCACCTGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MKVAAILQPAVALMAWTMVMWLWMYATRIPAMSAAKLDPDSLARDPSRTLDDILPANVQWKAHNYNHLHEAPTLFYAAVL VIALVGQGNGTSASVAWAYVGLRVVHSLVQATVNKVVVRFSLFGLSSIALMALIYHAARLVF
Sequences:
>Translated_142_residues MKVAAILQPAVALMAWTMVMWLWMYATRIPAMSAAKLDPDSLARDPSRTLDDILPANVQWKAHNYNHLHEAPTLFYAAVL VIALVGQGNGTSASVAWAYVGLRVVHSLVQATVNKVVVRFSLFGLSSIALMALIYHAARLVF >Mature_142_residues MKVAAILQPAVALMAWTMVMWLWMYATRIPAMSAAKLDPDSLARDPSRTLDDILPANVQWKAHNYNHLHEAPTLFYAAVL VIALVGQGNGTSASVAWAYVGLRVVHSLVQATVNKVVVRFSLFGLSSIALMALIYHAARLVF
Specific function: Unknown
COG id: COG5331
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15561; Mature: 15561
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVAAILQPAVALMAWTMVMWLWMYATRIPAMSAAKLDPDSLARDPSRTLDDILPANVQW CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCEE KAHNYNHLHEAPTLFYAAVLVIALVGQGNGTSASVAWAYVGLRVVHSLVQATVNKVVVRF ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLFGLSSIALMALIYHAARLVF HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVAAILQPAVALMAWTMVMWLWMYATRIPAMSAAKLDPDSLARDPSRTLDDILPANVQW CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCEE KAHNYNHLHEAPTLFYAAVLVIALVGQGNGTSASVAWAYVGLRVVHSLVQATVNKVVVRF ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLFGLSSIALMALIYHAARLVF HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA