Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199726
Identifier: 87199726
GI number: 87199726
Start: 1796243
End: 1797076
Strand: Reverse
Name: 87199726
Synonym: Saro_1709
Alternate gene names: NA
Gene position: 1797076-1796243 (Counterclockwise)
Preceding gene: 87199729
Following gene: 87199720
Centisome position: 50.46
GC content: 66.31
Gene sequence:
>834_bases ATGGCCAACAGCCCCTGGCAGCACCACCGCAGCACCAGCATCGCCGACGACATCGACTTCGAGATCAAGGGGCAGGAACT CCAGTTCCTCGAAATCGAGCTGGACCCCGGCGAAAGCGCCGTTGCCGAAGCGGGTGCGCTGGTCTGGAAGGACGGGGCTG TCGGCATGACGACGGTCTTCGGCGATGGCAGCGGCGGCAGCGAAGGCGGCTTCATGGGCAAGCTGCTTGGCGCGGGCAAG CGGCTGGTAACCGGCGAGAGCCTGTTCACCACCGTCTTTACCCATAACGGCCACGGCAAGGCCCGCGTCGCCTTCGCCTC GCCCACGCCCGGCGCGATCCTGCCGATCAAGCTTTCGGACGTTGGCGGCACGCTGATCTGCCAGAAGGACAGCTTCCTCG CCGCCGCGCGCGGGGTTTCCATCGGCATCGCCTTCCAGCGCCGGGTGATGACCGGCCTGTTCGGCGGCGAAGGCTTCATC ATGCAGAAGCTCGAAGGCGATGGCTGGGTCTTCGTCCAGATGGGCGGCACCCTTGTCGAAAAGGAACTGCGATCCGGCGA GGAACTGCACGTCGATACCGGGTGCCTTGCCGCCTATACCCCGTCGATCGATTTCGACCTTGTGACCGCCGGCGGCGTCC GTTCGGTCCTGTTCGGCGGCGAAGGACTGTTCTTCGCGCGGCTGCGCGGTCCGGGAAAGGTCTGGATCCAGTCCCTGCCC TTCTCGCGCCTTGCCGGCCGGATGCTTGCGGCAGCCGGATCGAGCGGCGGCCAGAACCGCGGCGAAGGCTCGATCCTTGG CGGATTGGGCGACTTCATCGGCGGCAACAACTGA
Upstream 100 bases:
>100_bases ACGTCATATCAGTGTCGACAAGCGCAGCATATCCTCTCTCGCATTCCGGCGCCTGGCCACTATCTTCGCGCCGTAAACCG AAAAAGAGGAGCATTCCCGC
Downstream 100 bases:
>100_bases AGCACGAATGGGCCGGCGGATCGCTCCGCCGGCCCAAGTTGCCGCAGCAGTGCGGGGTGGTTCAGAAGTTCGTGCGGACG GTGAAGCCCCAGGTCCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MANSPWQHHRSTSIADDIDFEIKGQELQFLEIELDPGESAVAEAGALVWKDGAVGMTTVFGDGSGGSEGGFMGKLLGAGK RLVTGESLFTTVFTHNGHGKARVAFASPTPGAILPIKLSDVGGTLICQKDSFLAAARGVSIGIAFQRRVMTGLFGGEGFI MQKLEGDGWVFVQMGGTLVEKELRSGEELHVDTGCLAAYTPSIDFDLVTAGGVRSVLFGGEGLFFARLRGPGKVWIQSLP FSRLAGRMLAAAGSSGGQNRGEGSILGGLGDFIGGNN
Sequences:
>Translated_277_residues MANSPWQHHRSTSIADDIDFEIKGQELQFLEIELDPGESAVAEAGALVWKDGAVGMTTVFGDGSGGSEGGFMGKLLGAGK RLVTGESLFTTVFTHNGHGKARVAFASPTPGAILPIKLSDVGGTLICQKDSFLAAARGVSIGIAFQRRVMTGLFGGEGFI MQKLEGDGWVFVQMGGTLVEKELRSGEELHVDTGCLAAYTPSIDFDLVTAGGVRSVLFGGEGLFFARLRGPGKVWIQSLP FSRLAGRMLAAAGSSGGQNRGEGSILGGLGDFIGGNN >Mature_276_residues ANSPWQHHRSTSIADDIDFEIKGQELQFLEIELDPGESAVAEAGALVWKDGAVGMTTVFGDGSGGSEGGFMGKLLGAGKR LVTGESLFTTVFTHNGHGKARVAFASPTPGAILPIKLSDVGGTLICQKDSFLAAARGVSIGIAFQRRVMTGLFGGEGFIM QKLEGDGWVFVQMGGTLVEKELRSGEELHVDTGCLAAYTPSIDFDLVTAGGVRSVLFGGEGLFFARLRGPGKVWIQSLPF SRLAGRMLAAAGSSGGQNRGEGSILGGLGDFIGGNN
Specific function: Unknown
COG id: COG2013
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002838 - InterPro: IPR016031 [H]
Pfam domain/function: PF01987 DUF124 [H]
EC number: NA
Molecular weight: Translated: 28813; Mature: 28682
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSPWQHHRSTSIADDIDFEIKGQELQFLEIELDPGESAVAEAGALVWKDGAVGMTTVF CCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEEECCCCHHHHHCCEEEEECCCCEEEEEE GDGSGGSEGGFMGKLLGAGKRLVTGESLFTTVFTHNGHGKARVAFASPTPGAILPIKLSD ECCCCCCCCCCHHHHHCCCCEEEECCCEEEEEEEECCCCCEEEEEECCCCCEEEEEEEEC VGGTLICQKDSFLAAARGVSIGIAFQRRVMTGLFGGEGFIMQKLEGDGWVFVQMGGTLVE CCCEEEEECCCCEEHHCCCEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCHHHH KELRSGEELHVDTGCLAAYTPSIDFDLVTAGGVRSVLFGGEGLFFARLRGPGKVWIQSLP HHHHCCCEEEEECCEEEEECCCCCEEEEECCCCEEEEECCCCEEEEEECCCCEEEEECCC FSRLAGRMLAAAGSSGGQNRGEGSILGGLGDFIGGNN HHHHHHHHHEECCCCCCCCCCCCCEECCCHHHCCCCC >Mature Secondary Structure ANSPWQHHRSTSIADDIDFEIKGQELQFLEIELDPGESAVAEAGALVWKDGAVGMTTVF CCCCCCCCCCCCCCCCCCEEEECCEEEEEEEEECCCCHHHHHCCEEEEECCCCEEEEEE GDGSGGSEGGFMGKLLGAGKRLVTGESLFTTVFTHNGHGKARVAFASPTPGAILPIKLSD ECCCCCCCCCCHHHHHCCCCEEEECCCEEEEEEEECCCCCEEEEEECCCCCEEEEEEEEC VGGTLICQKDSFLAAARGVSIGIAFQRRVMTGLFGGEGFIMQKLEGDGWVFVQMGGTLVE CCCEEEEECCCCEEHHCCCEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCHHHH KELRSGEELHVDTGCLAAYTPSIDFDLVTAGGVRSVLFGGEGLFFARLRGPGKVWIQSLP HHHHCCCEEEEECCEEEEECCCCCEEEEECCCCEEEEECCCCEEEEEECCCCEEEEECCC FSRLAGRMLAAAGSSGGQNRGEGSILGGLGDFIGGNN HHHHHHHHHEECCCCCCCCCCCCCEECCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA