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The map label for this gene is betI [H]

Identifier: 87199688

GI number: 87199688

Start: 1752191

End: 1752796

Strand: Reverse

Name: betI [H]

Synonym: Saro_1671

Alternate gene names: 87199688

Gene position: 1752796-1752191 (Counterclockwise)

Preceding gene: 87199691

Following gene: 87199683

Centisome position: 49.21

GC content: 70.46

Gene sequence:

>606_bases
GTGACGACCACCGCCCCCTCGCCCGCCTTCCGCCGCGCAGAGCCCGACGCGCGTCGGCTAAGCCTGATCGAGGCCTGCGC
CCGCGTGCTGGCGGCCAGCGGCGCAGCGGGCGCGAGCGTGCGGGCAATCGCCCAGGAAGCGGGTGTCTCGCCGGGACTGG
TCGGTCACTATTTCGGCGCAGTCGACGCGCTTGTTGCGGCAACTTACGAATACGTCGACGGGAAGGTCGCCGAGGCATTG
GACGAAGCCGTCGCCAATGCCGGGCCCGGCCCGCGCGCACGGTTGGAAGCCTTCGTCACCGCCAGCTTCGCGCCGCCCAT
CGCCGATCCGGCGCTGCTCGCCACCTGGATCGCGTTCTGGAGTCTCGTCACCGCGCGGGCCGACATCGCCCGCCAGCACG
ACGAACAGTATGCGGGCTACCGCGCGCGGCTGGAAACGTTGCTGGGAGATTGCGGTGTGGCGCCGCAGGCTCGGCGTCGT
CAGGCCATCGCAGTTACCGCGCTGGTCGACGGACTGTGGCTGGAGCTGTGCCTCTCGCCGGGCTGCTTCTCGGCCGAGGA
TGCGCGGGACATCGCCCGCAGCTTCCTCGCCTCGATCATTTCGTGA

Upstream 100 bases:

>100_bases
GTCCGATGAAATGTGCCGGAACGCGCCGGAAAGATCGCCCATTTGCCCGAATCCAAGATTGCTTATTGAACGATCGTACA
ACAACGGGCAGAATGTTCAA

Downstream 100 bases:

>100_bases
GGTCGGTGATCAGGGTCAGGTAGTAGGTGATCCCCGGCCGGATATTGGACAACCGCGTCCGCTCGTTGAGGCCGTGCGAG
AAGTCCTCGCTGTCCTTCGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTTTAPSPAFRRAEPDARRLSLIEACARVLAASGAAGASVRAIAQEAGVSPGLVGHYFGAVDALVAATYEYVDGKVAEAL
DEAVANAGPGPRARLEAFVTASFAPPIADPALLATWIAFWSLVTARADIARQHDEQYAGYRARLETLLGDCGVAPQARRR
QAIAVTALVDGLWLELCLSPGCFSAEDARDIARSFLASIIS

Sequences:

>Translated_201_residues
MTTTAPSPAFRRAEPDARRLSLIEACARVLAASGAAGASVRAIAQEAGVSPGLVGHYFGAVDALVAATYEYVDGKVAEAL
DEAVANAGPGPRARLEAFVTASFAPPIADPALLATWIAFWSLVTARADIARQHDEQYAGYRARLETLLGDCGVAPQARRR
QAIAVTALVDGLWLELCLSPGCFSAEDARDIARSFLASIIS
>Mature_200_residues
TTTAPSPAFRRAEPDARRLSLIEACARVLAASGAAGASVRAIAQEAGVSPGLVGHYFGAVDALVAATYEYVDGKVAEALD
EAVANAGPGPRARLEAFVTASFAPPIADPALLATWIAFWSLVTARADIARQHDEQYAGYRARLETLLGDCGVAPQARRRQ
AIAVTALVDGLWLELCLSPGCFSAEDARDIARSFLASIIS

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786505, Length=184, Percent_Identity=28.2608695652174, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21042; Mature: 20911

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTAPSPAFRRAEPDARRLSLIEACARVLAASGAAGASVRAIAQEAGVSPGLVGHYFGA
CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHH
VDALVAATYEYVDGKVAEALDEAVANAGPGPRARLEAFVTASFAPPIADPALLATWIAFW
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
SLVTARADIARQHDEQYAGYRARLETLLGDCGVAPQARRRQAIAVTALVDGLWLELCLSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GCFSAEDARDIARSFLASIIS
CCCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TTTAPSPAFRRAEPDARRLSLIEACARVLAASGAAGASVRAIAQEAGVSPGLVGHYFGA
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHH
VDALVAATYEYVDGKVAEALDEAVANAGPGPRARLEAFVTASFAPPIADPALLATWIAFW
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
SLVTARADIARQHDEQYAGYRARLETLLGDCGVAPQARRRQAIAVTALVDGLWLELCLSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GCFSAEDARDIARSFLASIIS
CCCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA