| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is fabG [H]
Identifier: 87199577
GI number: 87199577
Start: 1617712
End: 1618485
Strand: Reverse
Name: fabG [H]
Synonym: Saro_1560
Alternate gene names: 87199577
Gene position: 1618485-1617712 (Counterclockwise)
Preceding gene: 87199589
Following gene: 87199576
Centisome position: 45.44
GC content: 65.25
Gene sequence:
>774_bases ATGGACACGGGATTGGCCAAGCAAACGGCCGGAGAACTGGAAGGCAAGGTCGCAATCGTGACCGGCGCATCGCGCGGTTT AGGCAAGGCGATTGCTGCGCTCTATGCTGCGGAAGGCGCGCACGTGGCGCTCGTCGATCTAAAGCAGCACTGGGCGGAAG CCGCAGCAACGGAAATCGGCAATGGCGCCATCGGACTTGGTGCAGACGTGTCGGACCGTGCCGCATTGACGGCGGCGATT GATGAGGCCGCCGCACGGTTCGGCAAGATCGACGTGCTGGTCAACAATGCGATGTGGAACAGCTATGACCTGATCGCCGA CATCACCCCCGAAATCTTCGCTCGGATGACTGGCGTTGGCCTGGGCGGGATCGTCTGGGGCATCCAGGCGGTGTTGCCGC ACATGCCCGAAAGCGGCGGGGCCATCGTCAACATCGGTTCGATGGCCGGGCGTTTGGGGAGCGCGGGCGCGCTGCTCTAT GCTGCGGTCAAGGCGGGCGTGGACGGCCTTACCCGTTCTGCTTCGGTCGAGCTTGGCCCGCGCAGCATCCGCGTAAACGC GATCGCGCCTTCGACCGTGGCGACGGAAGGCGTGAAGGCGATCCTCACGCCCGAGCAATTCGAAAGCCGCGTTGGACAGA CGCCGCTCGGCAGGCTGGGCGAGATTGACGACATTGCCCAGGCAGCGCTCTGGCTGGCAGGCGCGCGATCGGGCTTCGTC ACGGGCCAATCGCTTGCCGTGGACGGAGGCCTTGGCCACACGCTGCGACGCTAG
Upstream 100 bases:
>100_bases TGCGGTTATCATGCACGGAATAATCTGGCCGACCGCTTGGCGCCCCCGCTGCGAATGCATCGTTGCCGGTTAAGCCCGTG CCAAAGCGAAAGGATACGCC
Downstream 100 bases:
>100_bases AACCCGAATCGCCAGTATGATTCTGGCGCCACCGGACCGCTCCGGATTGCCGATGAGGCATCATGCGGGCGATGAAGGGG CACCACAAGGAATTCGAGAC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MDTGLAKQTAGELEGKVAIVTGASRGLGKAIAALYAAEGAHVALVDLKQHWAEAAATEIGNGAIGLGADVSDRAALTAAI DEAAARFGKIDVLVNNAMWNSYDLIADITPEIFARMTGVGLGGIVWGIQAVLPHMPESGGAIVNIGSMAGRLGSAGALLY AAVKAGVDGLTRSASVELGPRSIRVNAIAPSTVATEGVKAILTPEQFESRVGQTPLGRLGEIDDIAQAALWLAGARSGFV TGQSLAVDGGLGHTLRR
Sequences:
>Translated_257_residues MDTGLAKQTAGELEGKVAIVTGASRGLGKAIAALYAAEGAHVALVDLKQHWAEAAATEIGNGAIGLGADVSDRAALTAAI DEAAARFGKIDVLVNNAMWNSYDLIADITPEIFARMTGVGLGGIVWGIQAVLPHMPESGGAIVNIGSMAGRLGSAGALLY AAVKAGVDGLTRSASVELGPRSIRVNAIAPSTVATEGVKAILTPEQFESRVGQTPLGRLGEIDDIAQAALWLAGARSGFV TGQSLAVDGGLGHTLRR >Mature_257_residues MDTGLAKQTAGELEGKVAIVTGASRGLGKAIAALYAAEGAHVALVDLKQHWAEAAATEIGNGAIGLGADVSDRAALTAAI DEAAARFGKIDVLVNNAMWNSYDLIADITPEIFARMTGVGLGGIVWGIQAVLPHMPESGGAIVNIGSMAGRLGSAGALLY AAVKAGVDGLTRSASVELGPRSIRVNAIAPSTVATEGVKAILTPEQFESRVGQTPLGRLGEIDDIAQAALWLAGARSGFV TGQSLAVDGGLGHTLRR
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=237, Percent_Identity=33.7552742616034, Blast_Score=123, Evalue=1e-28, Organism=Homo sapiens, GI10190704, Length=246, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI15277342, Length=262, Percent_Identity=32.4427480916031, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI32483357, Length=247, Percent_Identity=33.1983805668016, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI7705925, Length=242, Percent_Identity=31.8181818181818, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI59889578, Length=222, Percent_Identity=29.7297297297297, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI4758504, Length=254, Percent_Identity=32.6771653543307, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=29.3650793650794, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI5031737, Length=257, Percent_Identity=29.1828793774319, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI31542939, Length=217, Percent_Identity=31.7972350230415, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI66933014, Length=247, Percent_Identity=29.9595141700405, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI4503301, Length=246, Percent_Identity=27.2357723577236, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI83715985, Length=253, Percent_Identity=30.8300395256917, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI126723191, Length=184, Percent_Identity=33.695652173913, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=28.8, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI224922801, Length=177, Percent_Identity=31.0734463276836, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI4503817, Length=194, Percent_Identity=30.4123711340206, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI33667109, Length=209, Percent_Identity=28.7081339712919, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI20149619, Length=194, Percent_Identity=30.4123711340206, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI142976729, Length=217, Percent_Identity=27.6497695852535, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI7706318, Length=208, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=36.0995850622407, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1787905, Length=246, Percent_Identity=36.9918699186992, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=34.9206349206349, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1790717, Length=244, Percent_Identity=33.1967213114754, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1789208, Length=246, Percent_Identity=32.520325203252, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=33.469387755102, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI87082160, Length=246, Percent_Identity=31.7073170731707, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1789378, Length=249, Percent_Identity=30.5220883534137, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=30.859375, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788459, Length=247, Percent_Identity=29.9595141700405, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=28.6885245901639, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787820, Length=231, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1786812, Length=252, Percent_Identity=27.3809523809524, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788891, Length=235, Percent_Identity=25.531914893617, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17555706, Length=244, Percent_Identity=37.2950819672131, Blast_Score=127, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=33.7164750957854, Blast_Score=122, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=32.6612903225806, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17560150, Length=256, Percent_Identity=31.25, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17563726, Length=254, Percent_Identity=31.1023622047244, Blast_Score=114, Evalue=4e-26, Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=33.1967213114754, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI72000259, Length=258, Percent_Identity=30.6201550387597, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17562906, Length=258, Percent_Identity=30.6201550387597, Blast_Score=110, Evalue=7e-25, Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=30.6772908366534, Blast_Score=109, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17531453, Length=260, Percent_Identity=30.7692307692308, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17538480, Length=261, Percent_Identity=30.6513409961686, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17562904, Length=258, Percent_Identity=31.3953488372093, Blast_Score=107, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17562990, Length=256, Percent_Identity=29.6875, Blast_Score=107, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17559104, Length=257, Percent_Identity=31.9066147859922, Blast_Score=107, Evalue=7e-24, Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=30.6513409961686, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=29.8387096774194, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17562908, Length=264, Percent_Identity=30.6818181818182, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17544670, Length=262, Percent_Identity=27.8625954198473, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI193204405, Length=258, Percent_Identity=29.4573643410853, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17560332, Length=258, Percent_Identity=31.3953488372093, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17561402, Length=249, Percent_Identity=30.1204819277108, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17538486, Length=260, Percent_Identity=30, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17551412, Length=260, Percent_Identity=30, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17565030, Length=268, Percent_Identity=30.9701492537313, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=29.2682926829268, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17536025, Length=257, Percent_Identity=28.4046692607004, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17561272, Length=257, Percent_Identity=29.9610894941634, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17536651, Length=264, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI193203117, Length=195, Percent_Identity=27.6923076923077, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193203115, Length=190, Percent_Identity=27.8947368421053, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17567345, Length=173, Percent_Identity=30.0578034682081, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17564282, Length=190, Percent_Identity=28.9473684210526, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17538182, Length=254, Percent_Identity=29.1338582677165, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17508895, Length=196, Percent_Identity=29.0816326530612, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71982365, Length=197, Percent_Identity=30.4568527918782, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=249, Percent_Identity=30.9236947791165, Blast_Score=107, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6322861, Length=186, Percent_Identity=34.9462365591398, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323882, Length=200, Percent_Identity=30.5, Blast_Score=70, Evalue=4e-13, Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=37.3493975903614, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI24639444, Length=249, Percent_Identity=35.7429718875502, Blast_Score=118, Evalue=4e-27, Organism=Drosophila melanogaster, GI21357041, Length=247, Percent_Identity=32.7935222672065, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24644339, Length=246, Percent_Identity=33.3333333333333, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI28571526, Length=247, Percent_Identity=31.5789473684211, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=30.6772908366534, Blast_Score=104, Evalue=6e-23, Organism=Drosophila melanogaster, GI24643142, Length=240, Percent_Identity=31.6666666666667, Blast_Score=104, Evalue=7e-23, Organism=Drosophila melanogaster, GI24644337, Length=248, Percent_Identity=31.0483870967742, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=29.1338582677165, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI281364892, Length=246, Percent_Identity=28.8617886178862, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI24665243, Length=212, Percent_Identity=29.7169811320755, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24649181, Length=191, Percent_Identity=30.8900523560209, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI18859837, Length=197, Percent_Identity=30.4568527918782, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24581726, Length=214, Percent_Identity=27.5700934579439, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24665247, Length=213, Percent_Identity=30.0469483568075, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640492, Length=193, Percent_Identity=29.5336787564767, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI221331218, Length=207, Percent_Identity=29.951690821256, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI221331216, Length=208, Percent_Identity=30.2884615384615, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357673, Length=211, Percent_Identity=30.8056872037915, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26014; Mature: 26014
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTGLAKQTAGELEGKVAIVTGASRGLGKAIAALYAAEGAHVALVDLKQHWAEAAATEIG CCCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCC NGAIGLGADVSDRAALTAAIDEAAARFGKIDVLVNNAMWNSYDLIADITPEIFARMTGVG CCCEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHCCCCHHHHHHHHCCC LGGIVWGIQAVLPHMPESGGAIVNIGSMAGRLGSAGALLYAAVKAGVDGLTRSASVELGP HHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEECC RSIRVNAIAPSTVATEGVKAILTPEQFESRVGQTPLGRLGEIDDIAQAALWLAGARSGFV CEEEEEEECCCHHHHCCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC TGQSLAVDGGLGHTLRR CCCEEEECCCCCHHCCC >Mature Secondary Structure MDTGLAKQTAGELEGKVAIVTGASRGLGKAIAALYAAEGAHVALVDLKQHWAEAAATEIG CCCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCC NGAIGLGADVSDRAALTAAIDEAAARFGKIDVLVNNAMWNSYDLIADITPEIFARMTGVG CCCEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHCCCCHHHHHHHHCCC LGGIVWGIQAVLPHMPESGGAIVNIGSMAGRLGSAGALLYAAVKAGVDGLTRSASVELGP HHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEECC RSIRVNAIAPSTVATEGVKAILTPEQFESRVGQTPLGRLGEIDDIAQAALWLAGARSGFV CEEEEEEECCCHHHHCCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC TGQSLAVDGGLGHTLRR CCCEEEECCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]