Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199121
Identifier: 87199121
GI number: 87199121
Start: 1141436
End: 1141846
Strand: Direct
Name: 87199121
Synonym: Saro_1099
Alternate gene names: NA
Gene position: 1141436-1141846 (Clockwise)
Preceding gene: 87199118
Following gene: 87199122
Centisome position: 32.05
GC content: 65.69
Gene sequence:
>411_bases TTGCCCCGCAGCATAGAGGGCGCGATGGACCGGATGACACAGATTCTATCGCGCCTAGCCCGACTGGCGTTCTGGCCGGC GCTTGTCTTTGCGCTGGTCATGGCGGTTCTGCCAAAGCCGCCAGAACTGCCAACGGATGCGCTGGGCGACAAGTTCCAGC ACATGCTGGCGTTCTTCACGTTGACCACGCTGGCCGGGCTGGGCTGGCCGCGCGCATCGATCGTGCGGACCGCGTTGTGG CTTTCGCTGGTGGGCGCGGGAATCGAAGTCGTGCAGGCGATTCCGGACCTCCACCGCGATTCCGATTGGCGCGACTGGGT GGCGGACAGCGCGGCGATCATGGCCGCCTGCCTGCCAGTGTTCTACTTCCGCCGCGTGGCCGGCGATCCGGGCGAATCCG GAAAAGCTTGA
Upstream 100 bases:
>100_bases GGGGACCTGGGCGGAAAGTTCAGCGGAAGTCTGGTCAGTCATGCAGGCATTCATATCCGGTTTGCGGCGGTGCGCCACCC CGTACGGGTTGTCAGCGAAA
Downstream 100 bases:
>100_bases GGTTTCCTTCAAGCGCCGTTTCCGTTAGGGCGCGCGGATGGAAAATGCAGCGCTCACGCCCGTAGTGCAGGGGGCCGCCG ACGACGCGGACGCCCTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MPRSIEGAMDRMTQILSRLARLAFWPALVFALVMAVLPKPPELPTDALGDKFQHMLAFFTLTTLAGLGWPRASIVRTALW LSLVGAGIEVVQAIPDLHRDSDWRDWVADSAAIMAACLPVFYFRRVAGDPGESGKA
Sequences:
>Translated_136_residues MPRSIEGAMDRMTQILSRLARLAFWPALVFALVMAVLPKPPELPTDALGDKFQHMLAFFTLTTLAGLGWPRASIVRTALW LSLVGAGIEVVQAIPDLHRDSDWRDWVADSAAIMAACLPVFYFRRVAGDPGESGKA >Mature_135_residues PRSIEGAMDRMTQILSRLARLAFWPALVFALVMAVLPKPPELPTDALGDKFQHMLAFFTLTTLAGLGWPRASIVRTALWL SLVGAGIEVVQAIPDLHRDSDWRDWVADSAAIMAACLPVFYFRRVAGDPGESGKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14907; Mature: 14775
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSIEGAMDRMTQILSRLARLAFWPALVFALVMAVLPKPPELPTDALGDKFQHMLAFFT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LTTLAGLGWPRASIVRTALWLSLVGAGIEVVQAIPDLHRDSDWRDWVADSAAIMAACLPV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH FYFRRVAGDPGESGKA HHHHHHCCCCCCCCCC >Mature Secondary Structure PRSIEGAMDRMTQILSRLARLAFWPALVFALVMAVLPKPPELPTDALGDKFQHMLAFFT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LTTLAGLGWPRASIVRTALWLSLVGAGIEVVQAIPDLHRDSDWRDWVADSAAIMAACLPV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH FYFRRVAGDPGESGKA HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA