Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
---|---|
Accession | NC_007794 |
Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87198953
Identifier: 87198953
GI number: 87198953
Start: 979898
End: 980467
Strand: Direct
Name: 87198953
Synonym: Saro_0931
Alternate gene names: NA
Gene position: 979898-980467 (Clockwise)
Preceding gene: 87198952
Following gene: 87198955
Centisome position: 27.51
GC content: 71.05
Gene sequence:
>570_bases ATGTTCATGCGCAGCGAACGGCTGTTCCTGCGGCCCGGTTGGCCGGAGGACTGGGCCGAACTTCACGCCCTGATCGACGA CGAAGCGGTCGTCCGCAACCTCGCGCGGGCGCCATGGCCTTATGCGCCCGAGGACGCCAAGGCGTTCGTCGGCGCGCAAC ACGGTGGACGGCACCCGCAGCTCTTCGTGACGTTGCCCGGCGCGCACGGCTCACGCCTGATCGGCTGCGTCGGCCTGTTC GACGACCGTGGCGAGGCACAGCTCGGCTACTGGATCGCGCGGGCGCACTGGGGCCGCGGCTATGCCACCGAAGCCGTGCG CAGCCTGCTTTCGCTGGCCCGCACGCTCGGTCATCGCCGCGTCATGGCTTGCCATTTCGTCGACAATCCGGCGTCGGGCC GCGTCATGGAAAAGACGGGGTTCCGGCCCACGGGCGAAATCCGCCTGGGCAGGAGCGCCGCGCGCCTGCAACCCGCCGCG ACCGTCGTCCACGCCATCGACCTCGTCCCGCCGGTGGATTGCGACGGGCCCGAGGACGGCGGTTTCGAGCCGATGCGCCG GGCGGCCTGA
Upstream 100 bases:
>100_bases CGCCCAGCGCGATCACGGATCGCCCTGGCGCAAGGCGCAATACGGCTGTCATTTGCTCGCTCTAGCTGGCGCGCAGAGGA GCCGAGGAAGGAGACGAACG
Downstream 100 bases:
>100_bases CGGCGACGCGGTGACGATGATGCGGTGACTGGAGGCCTGACCGGATGGTCAGCCCGGCATCACCGCATCGGTAAACTCGC TGTCAGCCTTGCCGATCAGC
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase Gnat Family; GNAT Family Acetyltransferase; GCN5-Like N-Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Protein; N-Acetyltransferase; 7 8-Dihydro-8-Oxoguanine-Triphosphatase; Acetyltransferase GNAT Family Protein; NTP Pyrophosphohydrolase; Gcn5-Related N-Acetyltransferase; Bifunctional Acetyltransferase; Acetyltransferase Gnat Family Protein
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MFMRSERLFLRPGWPEDWAELHALIDDEAVVRNLARAPWPYAPEDAKAFVGAQHGGRHPQLFVTLPGAHGSRLIGCVGLF DDRGEAQLGYWIARAHWGRGYATEAVRSLLSLARTLGHRRVMACHFVDNPASGRVMEKTGFRPTGEIRLGRSAARLQPAA TVVHAIDLVPPVDCDGPEDGGFEPMRRAA
Sequences:
>Translated_189_residues MFMRSERLFLRPGWPEDWAELHALIDDEAVVRNLARAPWPYAPEDAKAFVGAQHGGRHPQLFVTLPGAHGSRLIGCVGLF DDRGEAQLGYWIARAHWGRGYATEAVRSLLSLARTLGHRRVMACHFVDNPASGRVMEKTGFRPTGEIRLGRSAARLQPAA TVVHAIDLVPPVDCDGPEDGGFEPMRRAA >Mature_189_residues MFMRSERLFLRPGWPEDWAELHALIDDEAVVRNLARAPWPYAPEDAKAFVGAQHGGRHPQLFVTLPGAHGSRLIGCVGLF DDRGEAQLGYWIARAHWGRGYATEAVRSLLSLARTLGHRRVMACHFVDNPASGRVMEKTGFRPTGEIRLGRSAARLQPAA TVVHAIDLVPPVDCDGPEDGGFEPMRRAA
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20827; Mature: 20827
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMRSERLFLRPGWPEDWAELHALIDDEAVVRNLARAPWPYAPEDAKAFVGAQHGGRHPQ CCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCE LFVTLPGAHGSRLIGCVGLFDDRGEAQLGYWIARAHWGRGYATEAVRSLLSLARTLGHRR EEEEECCCCCCEEEEEEEECCCCCCCHHHHEEEEHHCCCCHHHHHHHHHHHHHHHHCCCE VMACHFVDNPASGRVMEKTGFRPTGEIRLGRSAARLQPAATVVHAIDLVPPVDCDGPEDG EEEEEEECCCCCCEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GFEPMRRAA CCCCHHHCC >Mature Secondary Structure MFMRSERLFLRPGWPEDWAELHALIDDEAVVRNLARAPWPYAPEDAKAFVGAQHGGRHPQ CCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCE LFVTLPGAHGSRLIGCVGLFDDRGEAQLGYWIARAHWGRGYATEAVRSLLSLARTLGHRR EEEEECCCCCCEEEEEEEECCCCCCCHHHHEEEEHHCCCCHHHHHHHHHHHHHHHHCCCE VMACHFVDNPASGRVMEKTGFRPTGEIRLGRSAARLQPAATVVHAIDLVPPVDCDGPEDG EEEEEEECCCCCCEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GFEPMRRAA CCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA