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The map label for this gene is acdA [H]

Identifier: 87198880

GI number: 87198880

Start: 908398

End: 909540

Strand: Direct

Name: acdA [H]

Synonym: Saro_0858

Alternate gene names: 87198880

Gene position: 908398-909540 (Clockwise)

Preceding gene: 87198879

Following gene: 87198881

Centisome position: 25.51

GC content: 64.83

Gene sequence:

>1143_bases
ATGACCGAACAGTTCGCGCTGACCGAAGACCAGATCGCCATCCAGGACATGGCGCGGCGCTTCACCGCCGACGCCATCAC
GCCTTTCGCGGCACAGTGGGACGAGGACCACACCTTCCCGCGCGACACGATCAAGGCGGCGGCGGAACTGGGCTTCGCGG
CGATCTATGTCAGCGAGGAATCCGGCGGGATCGGCCTTGGCCGTCTCGAGGCCGCGCTCATCATGGAAGCCATGGCCTAT
GGCTGCCCGGCGACCAGTGCCTTCATCTCGATCCACAACATGGCCGCTTGGATGATCGACAAGTTCGGCGGCGACGAGAT
CAAGAGCCGTTACCTGCCCAGTCTCGTCACCATGGACCAGATCGCAAGCTATTGCCTGACCGAGCCGGGTTCGGGCTCCG
ACGCGGCGGCGCTCAAGACCACGGCTCGGCTGGAAGGTGACCACTACGTCGTCAACGGCACCAAGCAGTTCATTTCGGGC
GGCGGGGTCAACGATCTCTACGTCACCATGGTCCGCACCGGCGATAATGGTGCGAAAGGCATTTCCTGCCTGGTGATCGA
GAAGGACATGCCGGGCGTCAGCTTCGGCGCGCCGGAGCGCAAGCTGGGCTGGAATGCCTCGCCCACCGCGCAGGTCATCT
TTGACAACGTCAAGGTGCCTGTCGCCAACCGCGTCGGCGCCGAGGGCGACGGCTTCAAGTTCGCGATGGCCGGTCTCGAC
GGCGGCCGCCTCAACATCGGCGCCTGCTCGCTCGGCGGTGCGCAGCGCTGCCTTGACGAGGCCGTGGCCTACGTCAAGGA
CCGCAGCCAGTTCGGCAAGGCCATCGCCGAGTTCCAGAACACCCAGTTCCAGCTCGCCGACATGGCGACCGATCTCGAAG
CCTCGCGCGCGCTGCTCTACCTCGCGGCGGCCAAGGTCACCGCAAACGCACCGGACAAGACCCGCTTCTCGGCCATGGCC
AAGAAGCTCGCCACCGACAACGGCTCCTCGATCGTCGATCGCGCACTGCAGATGTTCGGCGGCTACGGCTACCTGCGCGA
TTACCCGATCGAGCGCTTCTGGCGCGACCTTCGCGTCCACCGCATCCTCGAAGGCACGAACGAAGTCATGCGCATGATCG
TGGGAAGGGACCTCTTGAAGTGA

Upstream 100 bases:

>100_bases
TTTCCTGCGGATAGCACTGGACAGCATGGGCGGCGAACCATATCCGCCGCCCAGCTTGAGTTTAAGGGCACGGTTAACCT
CGTGTGACGGGAAGAGAGAG

Downstream 100 bases:

>100_bases
TCGACGAAGTACTTGCCAAACGCGAAGGCGCCGCCGGCATCCTTTCGCTCAACCGGCCCAAGGCGATCCACGCGCTGACG
CTGGACATGGTCCATGCGAT

Product: butyryl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MTEQFALTEDQIAIQDMARRFTADAITPFAAQWDEDHTFPRDTIKAAAELGFAAIYVSEESGGIGLGRLEAALIMEAMAY
GCPATSAFISIHNMAAWMIDKFGGDEIKSRYLPSLVTMDQIASYCLTEPGSGSDAAALKTTARLEGDHYVVNGTKQFISG
GGVNDLYVTMVRTGDNGAKGISCLVIEKDMPGVSFGAPERKLGWNASPTAQVIFDNVKVPVANRVGAEGDGFKFAMAGLD
GGRLNIGACSLGGAQRCLDEAVAYVKDRSQFGKAIAEFQNTQFQLADMATDLEASRALLYLAAAKVTANAPDKTRFSAMA
KKLATDNGSSIVDRALQMFGGYGYLRDYPIERFWRDLRVHRILEGTNEVMRMIVGRDLLK

Sequences:

>Translated_380_residues
MTEQFALTEDQIAIQDMARRFTADAITPFAAQWDEDHTFPRDTIKAAAELGFAAIYVSEESGGIGLGRLEAALIMEAMAY
GCPATSAFISIHNMAAWMIDKFGGDEIKSRYLPSLVTMDQIASYCLTEPGSGSDAAALKTTARLEGDHYVVNGTKQFISG
GGVNDLYVTMVRTGDNGAKGISCLVIEKDMPGVSFGAPERKLGWNASPTAQVIFDNVKVPVANRVGAEGDGFKFAMAGLD
GGRLNIGACSLGGAQRCLDEAVAYVKDRSQFGKAIAEFQNTQFQLADMATDLEASRALLYLAAAKVTANAPDKTRFSAMA
KKLATDNGSSIVDRALQMFGGYGYLRDYPIERFWRDLRVHRILEGTNEVMRMIVGRDLLK
>Mature_379_residues
TEQFALTEDQIAIQDMARRFTADAITPFAAQWDEDHTFPRDTIKAAAELGFAAIYVSEESGGIGLGRLEAALIMEAMAYG
CPATSAFISIHNMAAWMIDKFGGDEIKSRYLPSLVTMDQIASYCLTEPGSGSDAAALKTTARLEGDHYVVNGTKQFISGG
GVNDLYVTMVRTGDNGAKGISCLVIEKDMPGVSFGAPERKLGWNASPTAQVIFDNVKVPVANRVGAEGDGFKFAMAGLDG
GRLNIGACSLGGAQRCLDEAVAYVKDRSQFGKAIAEFQNTQFQLADMATDLEASRALLYLAAAKVTANAPDKTRFSAMAK
KLATDNGSSIVDRALQMFGGYGYLRDYPIERFWRDLRVHRILEGTNEVMRMIVGRDLLK

Specific function: Involved in the degradation of long-chain fatty acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI7656849, Length=374, Percent_Identity=51.6042780748663, Blast_Score=415, Evalue=1e-116,
Organism=Homo sapiens, GI4501859, Length=374, Percent_Identity=36.8983957219251, Blast_Score=262, Evalue=3e-70,
Organism=Homo sapiens, GI4557231, Length=379, Percent_Identity=36.1477572559367, Blast_Score=261, Evalue=1e-69,
Organism=Homo sapiens, GI187960098, Length=379, Percent_Identity=36.1477572559367, Blast_Score=261, Evalue=1e-69,
Organism=Homo sapiens, GI4557233, Length=378, Percent_Identity=38.8888888888889, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI21361497, Length=351, Percent_Identity=35.8974358974359, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI226958412, Length=376, Percent_Identity=32.4468085106383, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI76496475, Length=391, Percent_Identity=31.7135549872123, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI4557235, Length=391, Percent_Identity=31.7135549872123, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI4501857, Length=369, Percent_Identity=30.8943089430894, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI226958414, Length=336, Percent_Identity=33.6309523809524, Blast_Score=194, Evalue=8e-50,
Organism=Homo sapiens, GI4503943, Length=378, Percent_Identity=29.6296296296296, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI7669494, Length=374, Percent_Identity=29.4117647058824, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI48976061, Length=367, Percent_Identity=29.700272479564, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI211971008, Length=367, Percent_Identity=29.700272479564, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI38505218, Length=282, Percent_Identity=28.0141843971631, Blast_Score=105, Evalue=1e-22,
Organism=Escherichia coli, GI87081958, Length=381, Percent_Identity=30.4461942257218, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1786223, Length=374, Percent_Identity=29.4117647058824, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI87082384, Length=320, Percent_Identity=25.625, Blast_Score=77, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17533517, Length=375, Percent_Identity=49.6, Blast_Score=397, Evalue=1e-111,
Organism=Caenorhabditis elegans, GI17534899, Length=380, Percent_Identity=39.4736842105263, Blast_Score=285, Evalue=3e-77,
Organism=Caenorhabditis elegans, GI17569725, Length=379, Percent_Identity=37.9947229551451, Blast_Score=276, Evalue=1e-74,
Organism=Caenorhabditis elegans, GI17570075, Length=379, Percent_Identity=35.8839050131926, Blast_Score=259, Evalue=1e-69,
Organism=Caenorhabditis elegans, GI17508101, Length=365, Percent_Identity=36.1643835616438, Blast_Score=254, Evalue=7e-68,
Organism=Caenorhabditis elegans, GI17506239, Length=365, Percent_Identity=36.4383561643836, Blast_Score=252, Evalue=2e-67,
Organism=Caenorhabditis elegans, GI71985184, Length=349, Percent_Identity=35.5300859598854, Blast_Score=221, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17538396, Length=384, Percent_Identity=32.8125, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI71990804, Length=302, Percent_Identity=37.7483443708609, Blast_Score=191, Evalue=7e-49,
Organism=Caenorhabditis elegans, GI17505929, Length=379, Percent_Identity=32.9815303430079, Blast_Score=191, Evalue=7e-49,
Organism=Caenorhabditis elegans, GI17551932, Length=373, Percent_Identity=31.9034852546917, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI32563615, Length=227, Percent_Identity=40.0881057268723, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI71985192, Length=281, Percent_Identity=35.2313167259786, Blast_Score=171, Evalue=5e-43,
Organism=Caenorhabditis elegans, GI71982178, Length=274, Percent_Identity=31.021897810219, Blast_Score=171, Evalue=8e-43,
Organism=Caenorhabditis elegans, GI17534353, Length=374, Percent_Identity=26.7379679144385, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17531909, Length=233, Percent_Identity=28.3261802575107, Blast_Score=111, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17562446, Length=354, Percent_Identity=27.683615819209, Blast_Score=111, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI86563383, Length=273, Percent_Identity=27.4725274725275, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI86563381, Length=273, Percent_Identity=27.4725274725275, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17531913, Length=168, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24660351, Length=378, Percent_Identity=37.8306878306878, Blast_Score=274, Evalue=9e-74,
Organism=Drosophila melanogaster, GI24666513, Length=376, Percent_Identity=35.3723404255319, Blast_Score=247, Evalue=9e-66,
Organism=Drosophila melanogaster, GI24646207, Length=380, Percent_Identity=37.6315789473684, Blast_Score=247, Evalue=1e-65,
Organism=Drosophila melanogaster, GI21356377, Length=377, Percent_Identity=36.3395225464191, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI281363737, Length=387, Percent_Identity=34.3669250645995, Blast_Score=211, Evalue=5e-55,
Organism=Drosophila melanogaster, GI21355753, Length=381, Percent_Identity=32.2834645669291, Blast_Score=195, Evalue=6e-50,
Organism=Drosophila melanogaster, GI19920834, Length=378, Percent_Identity=28.042328042328, Blast_Score=135, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41085; Mature: 40954

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQFALTEDQIAIQDMARRFTADAITPFAAQWDEDHTFPRDTIKAAAELGFAAIYVSEE
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHCCEEEEEEECC
SGGIGLGRLEAALIMEAMAYGCPATSAFISIHNMAAWMIDKFGGDEIKSRYLPSLVTMDQ
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHH
IASYCLTEPGSGSDAAALKTTARLEGDHYVVNGTKQFISGGGVNDLYVTMVRTGDNGAKG
HHHHHCCCCCCCCCHHHHHHHHEECCCEEEECCHHHHHCCCCCCCEEEEEEEECCCCCCC
ISCLVIEKDMPGVSFGAPERKLGWNASPTAQVIFDNVKVPVANRVGAEGDGFKFAMAGLD
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCEEEEECCC
GGRLNIGACSLGGAQRCLDEAVAYVKDRSQFGKAIAEFQNTQFQLADMATDLEASRALLY
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH
LAAAKVTANAPDKTRFSAMAKKLATDNGSSIVDRALQMFGGYGYLRDYPIERFWRDLRVH
HEEHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHH
RILEGTNEVMRMIVGRDLLK
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TEQFALTEDQIAIQDMARRFTADAITPFAAQWDEDHTFPRDTIKAAAELGFAAIYVSEE
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHCCEEEEEEECC
SGGIGLGRLEAALIMEAMAYGCPATSAFISIHNMAAWMIDKFGGDEIKSRYLPSLVTMDQ
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHH
IASYCLTEPGSGSDAAALKTTARLEGDHYVVNGTKQFISGGGVNDLYVTMVRTGDNGAKG
HHHHHCCCCCCCCCHHHHHHHHEECCCEEEECCHHHHHCCCCCCCEEEEEEEECCCCCCC
ISCLVIEKDMPGVSFGAPERKLGWNASPTAQVIFDNVKVPVANRVGAEGDGFKFAMAGLD
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCEEEEECCC
GGRLNIGACSLGGAQRCLDEAVAYVKDRSQFGKAIAEFQNTQFQLADMATDLEASRALLY
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH
LAAAKVTANAPDKTRFSAMAKKLATDNGSSIVDRALQMFGGYGYLRDYPIERFWRDLRVH
HEEHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHH
RILEGTNEVMRMIVGRDLLK
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]