Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198818
Identifier: 87198818
GI number: 87198818
Start: 845889
End: 846629
Strand: Direct
Name: 87198818
Synonym: Saro_0796
Alternate gene names: NA
Gene position: 845889-846629 (Clockwise)
Preceding gene: 87198817
Following gene: 87198819
Centisome position: 23.75
GC content: 62.35
Gene sequence:
>741_bases GTGTCCGATAGCAATCAGATTGCCGCGCTCGAAAGCCGCCTGAACGACCTCGAAAGGCGCCTGACGGTGCGCGAGGACGA GCTGGACGTACGCAAGCTCCAGCATCTCTACGGCTACCTGATCGACAAGTGCATGTATAACGAGACCGTGGACCTGTTCA CCGAAGATGGCGAAGTGCGCTTCTTCGGCGGCGTCTGGAAGGGCAAGGAGGGCATCCGCCGTCTCTACGTCGAACGTTTC CAGAAGCGCTTCACCTACGGCAACAACGGCCCGATCGACGGCTTCCTGCTCGATCACCCCCAGCTTCAGGACATCATCCA CGTGCAGGATGACGGGGTCACCGCTCTCGGCCGCGCGCGGTCGATGATGCAGGCCGGTCGCCACAAGGATTACGAGGGCG ATGCCCCGCACCTCAAGGCGCGCCAGTGGTGGGAAGGCGGCATCTACGAGAACACCTACAAGAAGGTGGACGGCGTGTGG CGGATGCACATCCTCAACTACATGCCGATCTGGCACGCCGATTTCGAAAGCGGCTGGGCCAACACCCCGCACGAATACGT GCCGTTCCCCAAGGTCACCTATCCCGAAGACCCGACCGGACCGGACGAACTGATCGCCGACCACTGGCTCTGGCCGACCC ACAAGCTGAACCCCTTCCACATGAAGCACCCGGTGACGGGCGAGGAAATGGTCGCGCAGCGCTGGCAGGGCGACATCGAC CGCGAGAACGCGCGGAAATAA
Upstream 100 bases:
>100_bases GGCGGTAGTTCTTTGCGCGAAGCCGGAAATGGGGCGTTGACAGCCACGTCCGGCTCGCGCAATTTGTTAGTAAGACAAAC TAAATTGATGGGAGTTGGAC
Downstream 100 bases:
>100_bases GAGATTGCGGGTGGGGGCCAATTCCTCCCGGCCTTCACCCGCAACCCACGCAGCAGGGCCGTCCCGCAGGAATCCCCACC ACCCTCCTGTTCGCTCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSDSNQIAALESRLNDLERRLTVREDELDVRKLQHLYGYLIDKCMYNETVDLFTEDGEVRFFGGVWKGKEGIRRLYVERF QKRFTYGNNGPIDGFLLDHPQLQDIIHVQDDGVTALGRARSMMQAGRHKDYEGDAPHLKARQWWEGGIYENTYKKVDGVW RMHILNYMPIWHADFESGWANTPHEYVPFPKVTYPEDPTGPDELIADHWLWPTHKLNPFHMKHPVTGEEMVAQRWQGDID RENARK
Sequences:
>Translated_246_residues MSDSNQIAALESRLNDLERRLTVREDELDVRKLQHLYGYLIDKCMYNETVDLFTEDGEVRFFGGVWKGKEGIRRLYVERF QKRFTYGNNGPIDGFLLDHPQLQDIIHVQDDGVTALGRARSMMQAGRHKDYEGDAPHLKARQWWEGGIYENTYKKVDGVW RMHILNYMPIWHADFESGWANTPHEYVPFPKVTYPEDPTGPDELIADHWLWPTHKLNPFHMKHPVTGEEMVAQRWQGDID RENARK >Mature_245_residues SDSNQIAALESRLNDLERRLTVREDELDVRKLQHLYGYLIDKCMYNETVDLFTEDGEVRFFGGVWKGKEGIRRLYVERFQ KRFTYGNNGPIDGFLLDHPQLQDIIHVQDDGVTALGRARSMMQAGRHKDYEGDAPHLKARQWWEGGIYENTYKKVDGVWR MHILNYMPIWHADFESGWANTPHEYVPFPKVTYPEDPTGPDELIADHWLWPTHKLNPFHMKHPVTGEEMVAQRWQGDIDR ENARK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28969; Mature: 28838
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSNQIAALESRLNDLERRLTVREDELDVRKLQHLYGYLIDKCMYNETVDLFTEDGEVR CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEE FFGGVWKGKEGIRRLYVERFQKRFTYGNNGPIDGFLLDHPQLQDIIHVQDDGVTALGRAR EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHEEECCCCCHHHHHHH SMMQAGRHKDYEGDAPHLKARQWWEGGIYENTYKKVDGVWRMHILNYMPIWHADFESGWA HHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEECCHHCCCC NTPHEYVPFPKVTYPEDPTGPDELIADHWLWPTHKLNPFHMKHPVTGEEMVAQRWQGDID CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCC RENARK CCCCCC >Mature Secondary Structure SDSNQIAALESRLNDLERRLTVREDELDVRKLQHLYGYLIDKCMYNETVDLFTEDGEVR CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEE FFGGVWKGKEGIRRLYVERFQKRFTYGNNGPIDGFLLDHPQLQDIIHVQDDGVTALGRAR EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHEEECCCCCHHHHHHH SMMQAGRHKDYEGDAPHLKARQWWEGGIYENTYKKVDGVWRMHILNYMPIWHADFESGWA HHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEECCHHCCCC NTPHEYVPFPKVTYPEDPTGPDELIADHWLWPTHKLNPFHMKHPVTGEEMVAQRWQGDID CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCC RENARK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA