Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is bglA [H]
Identifier: 87198811
GI number: 87198811
Start: 837765
End: 839096
Strand: Direct
Name: bglA [H]
Synonym: Saro_0789
Alternate gene names: 87198811
Gene position: 837765-839096 (Clockwise)
Preceding gene: 87198810
Following gene: 87198813
Centisome position: 23.52
GC content: 62.46
Gene sequence:
>1332_bases ATGATCGATCGTCGCAGCCTGATGGCTTCCGCCGTGGCTTTGAGCGCCTCAGTGATGACCAGCAAAAGCGCCTTGGCCCG GTCCGCCAAGCCGAGGCCGCTCGATCCGCAGTTTCCCGAAGGCTTCCTGTGGGGCGCAGCCACCGCCGCGCATCAGATCG AAGGCAACAATCTCAACGCCGACCTCTGGGTGATCGAAAACGTCCCCGGCACCATTTTTGCAGAACGGTCGGGCGACGCC GCAAACAGCTTCGAACTGTGGCCGGTCGACCTTGATCTCGTGAAGGGCATGGGGCTCAATTCCTATCGCTTCAGCCTCGA ATGGGCGCGGATCGAGCCGGATGAAGGGCATTTCTCCAATGCCATGCTCGATCACTACAAGGCGATGATCGAGGGTTGCC GGGCGCGGGGGCTCAAGCCGGTCGTCACCTTCAACCATTTCACCACCCCGCGCTGGTTCGCAGCCAAGGGCGGATGGCAT AATCCGGAGTCATCGGCGCTCTTCGCCCGCTTCTGCGAACGGGCGGCGCGCCATCTTGCGGCAGGAATCGAACTCGCCAC AACATTGAACGAGCCCAATCTGGCTGGCGTGATCGGCGAGATCCTGCCGCCGCCACTGGTGGCAGGCGACAAGGCAACGC AAGAAGCAGCAGCGAAGCAGCTCGGCGTGGCGCTTTATACGCCCGGCGTCGCGCTCTACATCAAGGAGCCGAAGACCTAT CGCGCCAACATGATGGAAGGCCATCGCCGTGGGGTCGCCGCAATCAAGGCGGTGCGGCCCGACCTGCCGGTTGGCGTAAG CCTGGCGATGATCGACGATCAGGCGGTTGGCAAGAACTCGATGCGCGACCGGATCCGCGAACGCTACTACAACGAGTGGC TGCGCCTTGCGGGCGAGACTTGCGATTTCATCGGTGTGCAGAACTACGAACGCAAGGTCTGGACCGACAAGGGCGAGTTG CCGTCCCCCGCCGATGCGCGGCGCAATACTGGCGGCGCTGAAGTCTGGCCCGGGTCGCTGGCGGGCGCGGTGCGCTATGC CCATGCAGTGACCAAGCTGCCGGTCTATGTCACCGAACACGGCGTCAATTCCGACGACGACGCGCTGCGCCAGTGGTTGA TCCCCGAAGCGCTTACCGAACTGAAGCGTGCGATCGACGATGGTGTGCCGGTGCGCGGCTATATCCACTGGTCGCTGATC GACAATTTCGAATGGGGCTTCGGCTACAAGTACCGCTTCGGCTTGCACTCGTTCGACCAAAGCACCTTCCAGCGAACCGC CAAACCCAGCGCAGCAATTCTGGGCAGAATTGCACGGCGAAATAGGCTCTGA
Upstream 100 bases:
>100_bases TCGGGGCCGGACCTGACGACTCCCCGGAAGAAGGGTGGATGGAACTGATGTACCGCTGGATGCGAACGCAGGGCCTGCTG CAAACGGAGAAGAAGTGACC
Downstream 100 bases:
>100_bases GAGGCGCCTGCCCGTGGGCTGATAAGGGCGTGACAAGTCGCCTACTGTTCAACGTTCTGTCTGCTTTATCGGATGTAGTC TGCCAACCCCGGATCGGATG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MIDRRSLMASAVALSASVMTSKSALARSAKPRPLDPQFPEGFLWGAATAAHQIEGNNLNADLWVIENVPGTIFAERSGDA ANSFELWPVDLDLVKGMGLNSYRFSLEWARIEPDEGHFSNAMLDHYKAMIEGCRARGLKPVVTFNHFTTPRWFAAKGGWH NPESSALFARFCERAARHLAAGIELATTLNEPNLAGVIGEILPPPLVAGDKATQEAAAKQLGVALYTPGVALYIKEPKTY RANMMEGHRRGVAAIKAVRPDLPVGVSLAMIDDQAVGKNSMRDRIRERYYNEWLRLAGETCDFIGVQNYERKVWTDKGEL PSPADARRNTGGAEVWPGSLAGAVRYAHAVTKLPVYVTEHGVNSDDDALRQWLIPEALTELKRAIDDGVPVRGYIHWSLI DNFEWGFGYKYRFGLHSFDQSTFQRTAKPSAAILGRIARRNRL
Sequences:
>Translated_443_residues MIDRRSLMASAVALSASVMTSKSALARSAKPRPLDPQFPEGFLWGAATAAHQIEGNNLNADLWVIENVPGTIFAERSGDA ANSFELWPVDLDLVKGMGLNSYRFSLEWARIEPDEGHFSNAMLDHYKAMIEGCRARGLKPVVTFNHFTTPRWFAAKGGWH NPESSALFARFCERAARHLAAGIELATTLNEPNLAGVIGEILPPPLVAGDKATQEAAAKQLGVALYTPGVALYIKEPKTY RANMMEGHRRGVAAIKAVRPDLPVGVSLAMIDDQAVGKNSMRDRIRERYYNEWLRLAGETCDFIGVQNYERKVWTDKGEL PSPADARRNTGGAEVWPGSLAGAVRYAHAVTKLPVYVTEHGVNSDDDALRQWLIPEALTELKRAIDDGVPVRGYIHWSLI DNFEWGFGYKYRFGLHSFDQSTFQRTAKPSAAILGRIARRNRL >Mature_443_residues MIDRRSLMASAVALSASVMTSKSALARSAKPRPLDPQFPEGFLWGAATAAHQIEGNNLNADLWVIENVPGTIFAERSGDA ANSFELWPVDLDLVKGMGLNSYRFSLEWARIEPDEGHFSNAMLDHYKAMIEGCRARGLKPVVTFNHFTTPRWFAAKGGWH NPESSALFARFCERAARHLAAGIELATTLNEPNLAGVIGEILPPPLVAGDKATQEAAAKQLGVALYTPGVALYIKEPKTY RANMMEGHRRGVAAIKAVRPDLPVGVSLAMIDDQAVGKNSMRDRIRERYYNEWLRLAGETCDFIGVQNYERKVWTDKGEL PSPADARRNTGGAEVWPGSLAGAVRYAHAVTKLPVYVTEHGVNSDDDALRQWLIPEALTELKRAIDDGVPVRGYIHWSLI DNFEWGFGYKYRFGLHSFDQSTFQRTAKPSAAILGRIARRNRL
Specific function: Unknown
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI13273313, Length=471, Percent_Identity=29.2993630573248, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI32481206, Length=498, Percent_Identity=27.1084337349398, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI24497614, Length=206, Percent_Identity=24.7572815533981, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI190360571, Length=85, Percent_Identity=44.7058823529412, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1789070, Length=433, Percent_Identity=23.3256351039261, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI2367270, Length=417, Percent_Identity=23.7410071942446, Blast_Score=79, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17539390, Length=474, Percent_Identity=26.1603375527426, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI21356577, Length=505, Percent_Identity=26.1386138613861, Blast_Score=137, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017736 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 49044; Mature: 49044
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDRRSLMASAVALSASVMTSKSALARSAKPRPLDPQFPEGFLWGAATAAHQIEGNNLNA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHEECCCCCCE DLWVIENVPGTIFAERSGDAANSFELWPVDLDLVKGMGLNSYRFSLEWARIEPDEGHFSN EEEEEECCCCEEEEECCCCCCCCEEEEECCHHHHCCCCCCCEEEEEEEEEECCCCCCHHH AMLDHYKAMIEGCRARGLKPVVTFNHFTTPRWFAAKGGWHNPESSALFARFCERAARHLA HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHH AGIELATTLNEPNLAGVIGEILPPPLVAGDKATQEAAAKQLGVALYTPGVALYIKEPKTY HCCCEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEECCCEEEEEECCCCH RANMMEGHRRGVAAIKAVRPDLPVGVSLAMIDDQAVGKNSMRDRIRERYYNEWLRLAGET HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHCCC CDFIGVQNYERKVWTDKGELPSPADARRNTGGAEVWPGSLAGAVRYAHAVTKLPVYVTEH CCCCCCCCCCHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC GVNSDDDALRQWLIPEALTELKRAIDDGVPVRGYIHWSLIDNFEWGFGYKYRFGLHSFDQ CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEECCCCHHHH STFQRTAKPSAAILGRIARRNRL HHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MIDRRSLMASAVALSASVMTSKSALARSAKPRPLDPQFPEGFLWGAATAAHQIEGNNLNA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHEECCCCCCE DLWVIENVPGTIFAERSGDAANSFELWPVDLDLVKGMGLNSYRFSLEWARIEPDEGHFSN EEEEEECCCCEEEEECCCCCCCCEEEEECCHHHHCCCCCCCEEEEEEEEEECCCCCCHHH AMLDHYKAMIEGCRARGLKPVVTFNHFTTPRWFAAKGGWHNPESSALFARFCERAARHLA HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHH AGIELATTLNEPNLAGVIGEILPPPLVAGDKATQEAAAKQLGVALYTPGVALYIKEPKTY HCCCEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEECCCEEEEEECCCCH RANMMEGHRRGVAAIKAVRPDLPVGVSLAMIDDQAVGKNSMRDRIRERYYNEWLRLAGET HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHCCC CDFIGVQNYERKVWTDKGELPSPADARRNTGGAEVWPGSLAGAVRYAHAVTKLPVYVTEH CCCCCCCCCCHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC GVNSDDDALRQWLIPEALTELKRAIDDGVPVRGYIHWSLIDNFEWGFGYKYRFGLHSFDQ CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEECCCCHHHH STFQRTAKPSAAILGRIARRNRL HHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8277941 [H]