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The map label for this gene is 87198805

Identifier: 87198805

GI number: 87198805

Start: 831038

End: 831862

Strand: Direct

Name: 87198805

Synonym: Saro_0782

Alternate gene names: NA

Gene position: 831038-831862 (Clockwise)

Preceding gene: 87198804

Following gene: 87198807

Centisome position: 23.33

GC content: 58.91

Gene sequence:

>825_bases
ATGGCTCAGCAATTCGGTCGACAAGGCGACGAATACATTCTCACGCCTGAGGAGATCGCCCAGTTCCATCGCGACGGCTA
CATCACCCTTTGCAGCGTGATGACCGAGGACGAACTTGCCCCGCTCGAGACCGAGTTCGAGCGCTTCATCCGCGGCGAAG
TCGGCGGAATGGGTAAGGATTTCTGTGACATGTCCGGGCCGTATGACCGTGCATTCGAGAACTTCAGCCTCGTCAATGCT
GTCCTGCCGCGGCACTACGATCCGCGCCTGCGCGATAACCTTTACGAACGGCGGGCTGCCTCGATCTCGCGACAACTGAT
CGGAGAGACTGCAACTCTGGATTATGACCAGTTCCTCGCAAAGCGCCCTGCGAAGCCCGATGCTGTTTTCACCATGCATC
AGGACCTGGGATACTGGCCCACTGGAACCCCTGAGCCACTTACCGCTACATGCAGCCTCGCGCTAGACGATGCCGATCCG
GAAAATGGTTGCCTCAAGGTCGTGCCGGGTTCGCAAAAGCAGGGCCTGCGTCCGCACCGTCCCCTGATGGGCGAGGACCG
CAGCGACTCTCACATCCTCAGCGTCGAAATTACTGATGCCGATCCCGTCGTCGAATTGCCCCTGAAACGCGGCGACATCA
CCGTGCATGATGAACTGATCGTTCACGGCTCAGGTGGGAATACCTCGCCGGACCGCTGGCGACGCACTTATATCGTTGCC
TTCCGCTCGAAAGCCTGCGTGGATTTCGAACGGTCGATCGGCTTCACGCATTCACACAACGACACAATCGCTTGGGAGAC
ACATCTCGCCGCGCTAACGGCGTAA

Upstream 100 bases:

>100_bases
ACGCTACGGCACCATCTGCATCGCCTGACGGCTTCTGTACCCGGCAATCTTCGGATCGGGGCTTTGACGGCTCATCAAAA
ACATGAAGGTTTCAGCAAAA

Downstream 100 bases:

>100_bases
ACGAGGTGTTCCGACTGGGCTCCAAGCCGCGCATGCGGTTCACCCGCTGTCGCAGTATGTCGGCCGCAAACATTGGTCCG
AAACTGTTGCACCACAGCCG

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Family Protein; SnoK-Like Protein; L-Proline 4-Hydroxylase; Phytanoyl-CoA Dioxygenase PhyH Family

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MAQQFGRQGDEYILTPEEIAQFHRDGYITLCSVMTEDELAPLETEFERFIRGEVGGMGKDFCDMSGPYDRAFENFSLVNA
VLPRHYDPRLRDNLYERRAASISRQLIGETATLDYDQFLAKRPAKPDAVFTMHQDLGYWPTGTPEPLTATCSLALDDADP
ENGCLKVVPGSQKQGLRPHRPLMGEDRSDSHILSVEITDADPVVELPLKRGDITVHDELIVHGSGGNTSPDRWRRTYIVA
FRSKACVDFERSIGFTHSHNDTIAWETHLAALTA

Sequences:

>Translated_274_residues
MAQQFGRQGDEYILTPEEIAQFHRDGYITLCSVMTEDELAPLETEFERFIRGEVGGMGKDFCDMSGPYDRAFENFSLVNA
VLPRHYDPRLRDNLYERRAASISRQLIGETATLDYDQFLAKRPAKPDAVFTMHQDLGYWPTGTPEPLTATCSLALDDADP
ENGCLKVVPGSQKQGLRPHRPLMGEDRSDSHILSVEITDADPVVELPLKRGDITVHDELIVHGSGGNTSPDRWRRTYIVA
FRSKACVDFERSIGFTHSHNDTIAWETHLAALTA
>Mature_273_residues
AQQFGRQGDEYILTPEEIAQFHRDGYITLCSVMTEDELAPLETEFERFIRGEVGGMGKDFCDMSGPYDRAFENFSLVNAV
LPRHYDPRLRDNLYERRAASISRQLIGETATLDYDQFLAKRPAKPDAVFTMHQDLGYWPTGTPEPLTATCSLALDDADPE
NGCLKVVPGSQKQGLRPHRPLMGEDRSDSHILSVEITDADPVVELPLKRGDITVHDELIVHGSGGNTSPDRWRRTYIVAF
RSKACVDFERSIGFTHSHNDTIAWETHLAALTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17544580, Length=234, Percent_Identity=25.2136752136752, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30769; Mature: 30638

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQQFGRQGDEYILTPEEIAQFHRDGYITLCSVMTEDELAPLETEFERFIRGEVGGMGKD
CCCHHCCCCCCEEECHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCH
FCDMSGPYDRAFENFSLVNAVLPRHYDPRLRDNLYERRAASISRQLIGETATLDYDQFLA
HHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
KRPAKPDAVFTMHQDLGYWPTGTPEPLTATCSLALDDADPENGCLKVVPGSQKQGLRPHR
HCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCC
PLMGEDRSDSHILSVEITDADPVVELPLKRGDITVHDELIVHGSGGNTSPDRWRRTYIVA
CCCCCCCCCCEEEEEEECCCCCEEECCCCCCCEEEEEEEEEECCCCCCCHHHHHEEEEEE
FRSKACVDFERSIGFTHSHNDTIAWETHLAALTA
ECCCCCCCHHHHCCCEECCCCEEEEEHHHHEECC
>Mature Secondary Structure 
AQQFGRQGDEYILTPEEIAQFHRDGYITLCSVMTEDELAPLETEFERFIRGEVGGMGKD
CCHHCCCCCCEEECHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCH
FCDMSGPYDRAFENFSLVNAVLPRHYDPRLRDNLYERRAASISRQLIGETATLDYDQFLA
HHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
KRPAKPDAVFTMHQDLGYWPTGTPEPLTATCSLALDDADPENGCLKVVPGSQKQGLRPHR
HCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCC
PLMGEDRSDSHILSVEITDADPVVELPLKRGDITVHDELIVHGSGGNTSPDRWRRTYIVA
CCCCCCCCCCEEEEEEECCCCCEEECCCCCCCEEEEEEEEEECCCCCCCHHHHHEEEEEE
FRSKACVDFERSIGFTHSHNDTIAWETHLAALTA
ECCCCCCCHHHHCCCEECCCCEEEEEHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA