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The map label for this gene is ctrC [H]

Identifier: 87198771

GI number: 87198771

Start: 792065

End: 792868

Strand: Direct

Name: ctrC [H]

Synonym: Saro_0747

Alternate gene names: 87198771

Gene position: 792065-792868 (Clockwise)

Preceding gene: 87198770

Following gene: 87198772

Centisome position: 22.24

GC content: 63.31

Gene sequence:

>804_bases
ATGATGCCGGCAGTGGCCCCCCCTTCCTCGTTTGCACATAGCCTGCACGTGCAGGGGCGCATCCTGCGTGCGCTTTTCAT
GCGCGAGGTGCTGACGCGGTACGGGCGGCACAATATCGGGTTCCTCTGGCTCTTCGTGGAACCGATGATCTTCACGCTGG
GCGTCACCGCGCTGTGGACGGCGACCAAGTCCGTGCATGGCAGCGACCTGCCGATCGTCGCCTTTGCCCTGACCGGCTAT
TCCAGCGTATTGCTCTGGCGCAACATGCCCGGGCGATGCATCGGTGCGCTGCAAGGAAGCCTGTCGCTCCTCTACCATCG
CAACATCAGGGTCCTCGACGTCTACGTCGCGCGCCTCATGCTCGAGTTCGGCGGCGCGACCATCTCGTTCGTGACGCTTG
GAATGCTGTTCATTTCGCTCGGCTGGCTCGAGCCTCCGCAGGATGTGCTCGAAGTCGTCTGCGGCTGGCTGATGATCGCA
TGGTTCGGTTCTGCCCTGGCAATCTGGCTTGGCGCGCTCTCGCACGAGAACGAGATCGTCGACAAGCTGTGGCACCCCGC
CTCATACCTGATCTTCCCGCTGTCAGGGTCGGCATTCATGGTCGACGCCTTGCCCAGGGTGGCGCAGGAAATCGTGCTCT
ACATCCCGATGGTCCACGGGGTGGAGATTGTGCGCGAGGGCTACTTCGGGGCTCGCGCCCGGGCGCATTACGACCTGGGC
TATGTACTACCTCTCAGCCTCCTGCTGACCGGCCTTGCTCTGCTCGAGATCCGCAAGCTTGCGGCGCGGGTGGTGCCCGA
ATGA

Upstream 100 bases:

>100_bases
CTCACCGCCTGAAGGCGATCCTCGCGACCTTCGTGCTGGCGCTCGTTGCCTGGGGCGTGTTGCGGACGCTTATCGCGGGT
ATCCGCGAGCACCACGACTG

Downstream 100 bases:

>100_bases
TCAGCGTGCGCGATCTCCGCAAGGTGTACACGACGCGGTTCGGCAAGAAGCTCGTGCTCGACGGCGTCAGCTTCGACCTG
AACAAGGGAGAGCGCCTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MMPAVAPPSSFAHSLHVQGRILRALFMREVLTRYGRHNIGFLWLFVEPMIFTLGVTALWTATKSVHGSDLPIVAFALTGY
SSVLLWRNMPGRCIGALQGSLSLLYHRNIRVLDVYVARLMLEFGGATISFVTLGMLFISLGWLEPPQDVLEVVCGWLMIA
WFGSALAIWLGALSHENEIVDKLWHPASYLIFPLSGSAFMVDALPRVAQEIVLYIPMVHGVEIVREGYFGARARAHYDLG
YVLPLSLLLTGLALLEIRKLAARVVPE

Sequences:

>Translated_267_residues
MMPAVAPPSSFAHSLHVQGRILRALFMREVLTRYGRHNIGFLWLFVEPMIFTLGVTALWTATKSVHGSDLPIVAFALTGY
SSVLLWRNMPGRCIGALQGSLSLLYHRNIRVLDVYVARLMLEFGGATISFVTLGMLFISLGWLEPPQDVLEVVCGWLMIA
WFGSALAIWLGALSHENEIVDKLWHPASYLIFPLSGSAFMVDALPRVAQEIVLYIPMVHGVEIVREGYFGARARAHYDLG
YVLPLSLLLTGLALLEIRKLAARVVPE
>Mature_267_residues
MMPAVAPPSSFAHSLHVQGRILRALFMREVLTRYGRHNIGFLWLFVEPMIFTLGVTALWTATKSVHGSDLPIVAFALTGY
SSVLLWRNMPGRCIGALQGSLSLLYHRNIRVLDVYVARLMLEFGGATISFVTLGMLFISLGWLEPPQDVLEVVCGWLMIA
WFGSALAIWLGALSHENEIVDKLWHPASYLIFPLSGSAFMVDALPRVAQEIVLYIPMVHGVEIVREGYFGARARAHYDLG
YVLPLSLLLTGLALLEIRKLAARVVPE

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the CtrB and CtrD proteins [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 29672; Mature: 29672

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPAVAPPSSFAHSLHVQGRILRALFMREVLTRYGRHNIGFLWLFVEPMIFTLGVTALWT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHH
ATKSVHGSDLPIVAFALTGYSSVLLWRNMPGRCIGALQGSLSLLYHRNIRVLDVYVARLM
HHHCCCCCCCCEEHHHHHCHHHEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LEFGGATISFVTLGMLFISLGWLEPPQDVLEVVCGWLMIAWFGSALAIWLGALSHENEIV
HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
DKLWHPASYLIFPLSGSAFMVDALPRVAQEIVLYIPMVHGVEIVREGYFGARARAHYDLG
HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
YVLPLSLLLTGLALLEIRKLAARVVPE
HHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMPAVAPPSSFAHSLHVQGRILRALFMREVLTRYGRHNIGFLWLFVEPMIFTLGVTALWT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHH
ATKSVHGSDLPIVAFALTGYSSVLLWRNMPGRCIGALQGSLSLLYHRNIRVLDVYVARLM
HHHCCCCCCCCEEHHHHHCHHHEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LEFGGATISFVTLGMLFISLGWLEPPQDVLEVVCGWLMIAWFGSALAIWLGALSHENEIV
HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
DKLWHPASYLIFPLSGSAFMVDALPRVAQEIVLYIPMVHGVEIVREGYFGARARAHYDLG
HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
YVLPLSLLLTGLALLEIRKLAARVVPE
HHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1659649; 10710307 [H]