Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198696
Identifier: 87198696
GI number: 87198696
Start: 708399
End: 708689
Strand: Direct
Name: 87198696
Synonym: Saro_0672
Alternate gene names: NA
Gene position: 708399-708689 (Clockwise)
Preceding gene: 87198695
Following gene: 87198697
Centisome position: 19.89
GC content: 65.29
Gene sequence:
>291_bases ATGCCTGCAAGCCGCGCCGTCGTGCCCACCGCCCATGCCAGCCGTTACCTCCAGCAGCTTTGCAAGCACTGGGGGCACAA GTTCGAAGTTTCGTTCGATCCCGCGCAGGGCCGGGTGAAGCTGCCGTTCGGTCCGGTCGACCTTCTGGCCGATGACGTTG CGCTGACGGTGACCTGCACCATCGAGGGTGACGGCGATCTTGCACGTATGCAGCAGGTCGTCGCGGATCACCTCAACCGC TTCGCGCACCGCGAGGGCGAACTGGCCTTTGCCTGGCAGCCTCTCGCCTGA
Upstream 100 bases:
>100_bases CGTCAACCTCGGATCGGTCTGGTGTGGCATGGACACTGTTGACTGACAGCGGAAAAGATATATCTTAGAAATAACATATT GACTCAGGAAAGCGATTCCC
Downstream 100 bases:
>100_bases GGTTGCATTCACAGCGCTTATCATCCGCGATAAAAACCATTCCTTTGTCGTGGCCGTAGGGCAGGGCTAGGCCATCGCTC AACTCCGGGAGATGAACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MPASRAVVPTAHASRYLQQLCKHWGHKFEVSFDPAQGRVKLPFGPVDLLADDVALTVTCTIEGDGDLARMQQVVADHLNR FAHREGELAFAWQPLA
Sequences:
>Translated_96_residues MPASRAVVPTAHASRYLQQLCKHWGHKFEVSFDPAQGRVKLPFGPVDLLADDVALTVTCTIEGDGDLARMQQVVADHLNR FAHREGELAFAWQPLA >Mature_95_residues PASRAVVPTAHASRYLQQLCKHWGHKFEVSFDPAQGRVKLPFGPVDLLADDVALTVTCTIEGDGDLARMQQVVADHLNRF AHREGELAFAWQPLA
Specific function: Unknown
COG id: COG3553
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10622; Mature: 10491
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASRAVVPTAHASRYLQQLCKHWGHKFEVSFDPAQGRVKLPFGPVDLLADDVALTVTCT CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCHHHHCCCEEEEEEEE IEGDGDLARMQQVVADHLNRFAHREGELAFAWQPLA EECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCC >Mature Secondary Structure PASRAVVPTAHASRYLQQLCKHWGHKFEVSFDPAQGRVKLPFGPVDLLADDVALTVTCT CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCHHHHCCCEEEEEEEE IEGDGDLARMQQVVADHLNRFAHREGELAFAWQPLA EECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA