Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198683
Identifier: 87198683
GI number: 87198683
Start: 693814
End: 694263
Strand: Direct
Name: 87198683
Synonym: Saro_0659
Alternate gene names: NA
Gene position: 693814-694263 (Clockwise)
Preceding gene: 87198682
Following gene: 87198684
Centisome position: 19.48
GC content: 64.67
Gene sequence:
>450_bases TTGGCCTGGCTGTCGGTCGCTCCCAAGGACAAGAGCAAGCGGCCGTTGAAAGGTTCGACCGCTCGCCGGGACACTCCGGT GAAGCGGGCGGATGCGATGCGCGCAGCCGGTCTAGAAGTCCGCTTGCCGCCCAATCCGGCGCCCTACCTCATCGACTGGC TCATGGAGATCGGACCGACTGCGCCCGGGGCCATGAGCCACGTCGCGGTCGGATGGCGCGACATTGCCGCCTGGCAGGAG GCAATGGGCGTCGACTTGCTGCCATGGGAGGCAGCACTCGTACGCCAGCTTTCGGCCGATTTCGCCAACCAGCTGCACGA CGCCGAAGACCAAGCCTGTCCCGCTCCCTGGAGTGAGCAGAAGGCGGTCGAGGACAATCGTGAAGCGGTGTCCCGCAAGC TCGAAATGACATTCAAGGCGCTCATCGCAGCGCAGAACCCCAAGAGGTAA
Upstream 100 bases:
>100_bases ACAGTCTCGGCTTCATCCGCGATCACGTGCATGCCGAGGTGCATAGCTGGGAGGCTTTTACGAAAGGCTCGGCCGCGAGC TGAGCCTCTACGTCCGGCAA
Downstream 100 bases:
>100_bases CAATGGCAGGCGTGAAGGCGGGCACTCTCGAAATCGAGATCCTGACGAACATGGCGCGCCTGCAGGAGGAAATGCGCCAG ATCGAAAAGTCGGTCGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAWLSVAPKDKSKRPLKGSTARRDTPVKRADAMRAAGLEVRLPPNPAPYLIDWLMEIGPTAPGAMSHVAVGWRDIAAWQE AMGVDLLPWEAALVRQLSADFANQLHDAEDQACPAPWSEQKAVEDNREAVSRKLEMTFKALIAAQNPKR
Sequences:
>Translated_149_residues MAWLSVAPKDKSKRPLKGSTARRDTPVKRADAMRAAGLEVRLPPNPAPYLIDWLMEIGPTAPGAMSHVAVGWRDIAAWQE AMGVDLLPWEAALVRQLSADFANQLHDAEDQACPAPWSEQKAVEDNREAVSRKLEMTFKALIAAQNPKR >Mature_148_residues AWLSVAPKDKSKRPLKGSTARRDTPVKRADAMRAAGLEVRLPPNPAPYLIDWLMEIGPTAPGAMSHVAVGWRDIAAWQEA MGVDLLPWEAALVRQLSADFANQLHDAEDQACPAPWSEQKAVEDNREAVSRKLEMTFKALIAAQNPKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16450; Mature: 16319
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWLSVAPKDKSKRPLKGSTARRDTPVKRADAMRAAGLEVRLPPNPAPYLIDWLMEIGPT CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCC APGAMSHVAVGWRDIAAWQEAMGVDLLPWEAALVRQLSADFANQLHDAEDQACPAPWSEQ CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH KAVEDNREAVSRKLEMTFKALIAAQNPKR HHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AWLSVAPKDKSKRPLKGSTARRDTPVKRADAMRAAGLEVRLPPNPAPYLIDWLMEIGPT CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCC APGAMSHVAVGWRDIAAWQEAMGVDLLPWEAALVRQLSADFANQLHDAEDQACPAPWSEQ CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH KAVEDNREAVSRKLEMTFKALIAAQNPKR HHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA