Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198638
Identifier: 87198638
GI number: 87198638
Start: 662553
End: 663497
Strand: Direct
Name: 87198638
Synonym: Saro_0614
Alternate gene names: NA
Gene position: 662553-663497 (Clockwise)
Preceding gene: 87198637
Following gene: 87198639
Centisome position: 18.6
GC content: 66.88
Gene sequence:
>945_bases ATGGCTTGCCTTGTACCTTCTTGCCGAAGGCACCAGCCCGCGCGGCTGCTGGCGGCGATCGCCCTGGCGCTGGGCCTTTC CGCAACGCCGGCAGCGGCAGTCGGAAGCGCGCAGTCGCCCCCGCTGTTCGCCGAACGCTGGATCGACGGGACCAATGGCG CGGAGCCCGCGACCCAAGTCCAGGCGCTCGACGCTGATACCTTCGTCATCCGGCAATCGGTCCACAGCAATTTCGAGGCG CCGTTCCTCTATCTGCTGTTCGGCCGTGACCGGGCCCTGCTGGTGGACACCGGCGCGGAAGGCGGCTCGATCCGCCCGAC CGTAGACCGGCTGGTCGACGAGTGGCTGGCTGCCCACAAGCGCAAGCGGATTGCGCTGGTCGTCGCGCACAGCCACAGCC ACGGCGACCACGTTGCCGGGGACGCGGCGTTTCAGGCTCGCCCGGATACGACGGTCGTCGGCCTCAAACCGGCGGATGTC GCCGCCTTCTTCGGGATCGGGCACTGGCCTGACGAGGTCGTCCGTTTCGACCTTGGCGGGCGGGCGCTTTCCATCCTGCC CACGCCCGGCCACCAGGCCGCCGCGATCATGGTCTATGATCCTCGCCTGAAGATGCTGCTTTCGGGCGATACGCTCTATC CCGGTCGACTTTACGTGCCGGTCAATTTTCTCGTCGACAACCGGGCAAGCGTCGACAGGCTGGCCAAGTTTGCCGCACGT CATCCGATCCGTGCGGTGCTTGGCGCCCACATCGAGATGTCGCGCACGGCCGGCCGCGACTACCCGCACGAGGCGGCCAC TCATCCGGACGAGCATCTGCTGGAACTGCCGGCGAGCGCAATCGCGGAACTGGATGCAGGACTGAGGGCCAGTCTCGACG TGCCCGAGAAGCCGCAGGTCCATGACCATTTCATTATCTATCCCGTGGCTCCCCGGCCCGAATGA
Upstream 100 bases:
>100_bases CGGTTCAGGTACTGACCGAAGGCCGGGCGCGGCGCCGTTCCGCGCCCGCTCAGATGCCGCAAGGGGCTCCGGTCGGGAGT CCCGCACGGAGAACACCATC
Downstream 100 bases:
>100_bases ACTGGGCGGCATAGATGAGGTCTATGACTATCATACCGCAATGGCATCTGGCGGTGATGGGGCGGTTCCGGGACGCTTCG TCAGCCGGGAAAGGTCGCCT
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase; Beta-Lactamase-Like; Beta-Lactamase Domain Protein; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Domain Protein
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MACLVPSCRRHQPARLLAAIALALGLSATPAAAVGSAQSPPLFAERWIDGTNGAEPATQVQALDADTFVIRQSVHSNFEA PFLYLLFGRDRALLVDTGAEGGSIRPTVDRLVDEWLAAHKRKRIALVVAHSHSHGDHVAGDAAFQARPDTTVVGLKPADV AAFFGIGHWPDEVVRFDLGGRALSILPTPGHQAAAIMVYDPRLKMLLSGDTLYPGRLYVPVNFLVDNRASVDRLAKFAAR HPIRAVLGAHIEMSRTAGRDYPHEAATHPDEHLLELPASAIAELDAGLRASLDVPEKPQVHDHFIIYPVAPRPE
Sequences:
>Translated_314_residues MACLVPSCRRHQPARLLAAIALALGLSATPAAAVGSAQSPPLFAERWIDGTNGAEPATQVQALDADTFVIRQSVHSNFEA PFLYLLFGRDRALLVDTGAEGGSIRPTVDRLVDEWLAAHKRKRIALVVAHSHSHGDHVAGDAAFQARPDTTVVGLKPADV AAFFGIGHWPDEVVRFDLGGRALSILPTPGHQAAAIMVYDPRLKMLLSGDTLYPGRLYVPVNFLVDNRASVDRLAKFAAR HPIRAVLGAHIEMSRTAGRDYPHEAATHPDEHLLELPASAIAELDAGLRASLDVPEKPQVHDHFIIYPVAPRPE >Mature_313_residues ACLVPSCRRHQPARLLAAIALALGLSATPAAAVGSAQSPPLFAERWIDGTNGAEPATQVQALDADTFVIRQSVHSNFEAP FLYLLFGRDRALLVDTGAEGGSIRPTVDRLVDEWLAAHKRKRIALVVAHSHSHGDHVAGDAAFQARPDTTVVGLKPADVA AFFGIGHWPDEVVRFDLGGRALSILPTPGHQAAAIMVYDPRLKMLLSGDTLYPGRLYVPVNFLVDNRASVDRLAKFAARH PIRAVLGAHIEMSRTAGRDYPHEAATHPDEHLLELPASAIAELDAGLRASLDVPEKPQVHDHFIIYPVAPRPE
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33882; Mature: 33751
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACLVPSCRRHQPARLLAAIALALGLSATPAAAVGSAQSPPLFAERWIDGTNGAEPATQV CCCCCCCHHCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHCCCCCCCCCCHHHE QALDADTFVIRQSVHSNFEAPFLYLLFGRDRALLVDTGAEGGSIRPTVDRLVDEWLAAHK EECCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHC RKRIALVVAHSHSHGDHVAGDAAFQARPDTTVVGLKPADVAAFFGIGHWPDEVVRFDLGG CCEEEEEEEECCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHCCCCCHHHHEEEECCC RALSILPTPGHQAAAIMVYDPRLKMLLSGDTLYPGRLYVPVNFLVDNRASVDRLAKFAAR CEEEEEECCCCCEEEEEEECCCEEEEEECCEECCCEEEEEEEEEECCCCCHHHHHHHHHC HPIRAVLGAHIEMSRTAGRDYPHEAATHPDEHLLELPASAIAELDAGLRASLDVPEKPQV CCHHHHHHCCEEEHHHCCCCCCCHHCCCCHHHHHHCCHHHHHHHCCCCEECCCCCCCCCC HDHFIIYPVAPRPE CCCEEEEECCCCCC >Mature Secondary Structure ACLVPSCRRHQPARLLAAIALALGLSATPAAAVGSAQSPPLFAERWIDGTNGAEPATQV CCCCCCHHCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHCCCCCCCCCCHHHE QALDADTFVIRQSVHSNFEAPFLYLLFGRDRALLVDTGAEGGSIRPTVDRLVDEWLAAHK EECCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHC RKRIALVVAHSHSHGDHVAGDAAFQARPDTTVVGLKPADVAAFFGIGHWPDEVVRFDLGG CCEEEEEEEECCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHCCCCCHHHHEEEECCC RALSILPTPGHQAAAIMVYDPRLKMLLSGDTLYPGRLYVPVNFLVDNRASVDRLAKFAAR CEEEEEECCCCCEEEEEEECCCEEEEEECCEECCCEEEEEEEEEECCCCCHHHHHHHHHC HPIRAVLGAHIEMSRTAGRDYPHEAATHPDEHLLELPASAIAELDAGLRASLDVPEKPQV CCHHHHHHCCEEEHHHCCCCCCCHHCCCCHHHHHHCCHHHHHHHCCCCEECCCCCCCCCC HDHFIIYPVAPRPE CCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA