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The map label for this gene is cirA [C]

Identifier: 87198637

GI number: 87198637

Start: 660041

End: 662467

Strand: Direct

Name: cirA [C]

Synonym: Saro_0613

Alternate gene names: 87198637

Gene position: 660041-662467 (Clockwise)

Preceding gene: 87198627

Following gene: 87198638

Centisome position: 18.53

GC content: 62.55

Gene sequence:

>2427_bases
ATGAAGATGATCCGAAACACGCTGCTGGGCGCGACCATTCTCATGGGCGTCGGCACCAGTTCCGCATGGGCGCAGGAACC
TGCCGCCGAAGGTGAACCCGCAGGAGGCTCGGGCGAGATCGTCGTTACCGCCACGCGGCGTGCAACCTCGCTTCAGGATG
TGCCGATCAACATCAGCGCCGTGGGCGCCGAGCAGCTTTCGCGGCAGCGCATCGACGACGTGCGCGACATCGCCGATTTT
ACCCCAGGCATGACCATTTCGGATACCGGACCGGGTTCCACCGGCACGATCGTCCTGCGAGGCCTCAATGCGTCGGACAC
GGACACCACCGGGGCGTCGTATGACGACTCGCTGGGTGTCTATCTTGGCGAAGTCCCGATCTACTACGACTTCAAGATGC
TCGACATCGCGCGCGTCGAAACGCTGCTCGGGCCGCAGGGGACGCTTTACGGTCTGGGGACGCTGGCCGGCGCCATCCGG
AACATTCCCAACCGGCCCGACCTTACTGCCTACCAAGCCGAGGCGCATGGCCGCGCCTATGGCAAGTCCCACAGCAGCCA
GGTTGGCTACCAGGCCGACGGGATGATCAACATCCCGCTCGTGACGGACCATATCGCCTTCCGTTCGGCCACCGGTTACT
TCTACGATCCAGGGTTCATCGACTACCCGCTGCTGCTGCAGACTCCGGGCGTCTCGCTCCCGCAGCCCAGCGGCCCTGAC
GGGGTTACCGAGGCGGATTACGCGGCGAACCTGAAGAGGCGCAAGGACCTCAACTTCGAGAGGACCTTTACCACCCGTAA
CCAGTTGCTGTTCCAGCTCAACGAAGACCTCAAGGTCAACTTCACCTATGCCTACCAGCAGACGAAGACGGACGGCGGGC
AGTACAACAGCAACGGCGTGCTGGGCACGGGCAAGTACGAAAGCGCGGGCCGTTACGTCGAGCCGGTGAACCGCCACGCC
CACCTTGGCAGCATGGAAGTCAACGCCAACCTCGGGGGCATCGCCGATCTCGTTGCGACGACCGCCTACACGACCGTGAA
AAACCGGGCGCAGTCCGACAACACCGATCTGCTGCTCGATCTCGATTATGGCTACGAAACCTTCCCTGCCTTCTCGAGCT
GGAACGAGAGCGAAGACGAGCGCAAGCAGTTCAACCAGGAAGTCCGGCTGGTTTCGCGTCATGGCGGACCTTTCAGCTGG
GTGCTGGGCGGTTTCTACAATCAGCAGAAGCGGCACCGCGACTATATCGAACACGTGCCCAACCACCCCTGGGTGGAATT
CGGCACGCAGCCCAATCCGGACGAGGTCGAATACGCATCGTACGTGACGTCCAAGGTGACCGAAAAGGCAATCTTCGGCG
AGGGCACGTTCCGGGTGACGCCTGCCTGGCAGGTCACCGCCGGCGCGCGCTACTTCGGCTACAACTCCAAGATCGCCGGG
GCGCTGGTGGTTCCGCTCATCGGCGACCCCGTCAGCCCCTATGACCTGACGCCCGCGGGCGGCACGGCCAAGAAGACCGG
CTGGGTGTGGAAGTTCAACAGCTCGTTCAACTTCACGCCCGACATCATGCTCTATGGCACCTACAGCAAGGGCTATCGCA
TTGGCGGCCCCAACAGCGTTGCGCCTTGCCCCAACCCGCTGCCGAATGATCCGGATGGCGACAACATCAATAATACGCAG
CTTCCCTGCGGGTTGCCGAACGAAGTGCAGTACGGGCCGGACACAACCAGGAATGCGGAAATCGGCCTGCGCGCCCAGCT
TTTCGAACGCAAGCTGACGTTCAATTTCAACGTGTTCCAGATCAAGTGGGATGGCATCCAGGTCGATTCCGCGACGTTGA
ACGGAATCGTCGGCATCACAGTCAACGGCGGCAAGGCCAAGTCCGAAGGGTTCGAAACCTCGTTCCAGCTGCGCCCCGTG
GACCGGCTGTCGATCCAGGGTACCTATTCCTATGTCAACGCCCGCCTGACCGAGGATGTGCCCGACAACATTCCGGTCAA
CGACCCGGCGGGAACCTATCCCAGTGCCCCGACCAAGCTCGATGCGCTGGCGGGTGATCGCCTGCCCGGATCCGCGAAGA
ACAGCGGCAGCCTGGGCGTGACGTACACCATGCCGTTCAAGGACGGACAGCTCGTCGCCGACTGGACCGCAACCTATCGC
GGCAACGTGGTCACGCGGCTTGGCTGGGACAGAGCCTATGGCGACAAGCTGCCGGGCTACGTCCTGCATCGCGCGTCGCT
GACCTACGATACCGACCGCTACAGCATCGGCCTGTTCGCCAACAACATCTTCGACAAGTACGCGGTGGCTTCCGTTGCCA
ACGACCGTTCGCGGGTGGGTCTGAACGACGGGGTGGTGCTGCGCTACTACAAGCGGACCGTGATCAATCCCCGCACCGTC
GGGATCGAGGCGCGGTTCAGGTACTGA

Upstream 100 bases:

>100_bases
CTACGGCCCGAAGAGGCCATAAGGCGCCGGCCCTGCCCGAGCGCCCCGGGGAGTGATGTCACCGAACCACAGGCACAACA
GCTAGGGGGCCGAAGTGACC

Downstream 100 bases:

>100_bases
CCGAAGGCCGGGCGCGGCGCCGTTCCGCGCCCGCTCAGATGCCGCAAGGGGCTCCGGTCGGGAGTCCCGCACGGAGAACA
CCATCATGGCTTGCCTTGTA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Domain Protein; NB Dependent Receptor; Nb-Dependent Receptor; NB-Dependent Siderophore Receptor; NB-Dependent Receptor Plug Domain Protein; NB-Dependent Receptor Protein; Outer Membrane nB-Dependent Receptor; Siderophore Receptor Protein; Outer Membrane Protein; NB-Dependent Outer Membrane Receptor; Outer Membrane Receptor Family Protein

Number of amino acids: Translated: 808; Mature: 808

Protein sequence:

>808_residues
MKMIRNTLLGATILMGVGTSSAWAQEPAAEGEPAGGSGEIVVTATRRATSLQDVPINISAVGAEQLSRQRIDDVRDIADF
TPGMTISDTGPGSTGTIVLRGLNASDTDTTGASYDDSLGVYLGEVPIYYDFKMLDIARVETLLGPQGTLYGLGTLAGAIR
NIPNRPDLTAYQAEAHGRAYGKSHSSQVGYQADGMINIPLVTDHIAFRSATGYFYDPGFIDYPLLLQTPGVSLPQPSGPD
GVTEADYAANLKRRKDLNFERTFTTRNQLLFQLNEDLKVNFTYAYQQTKTDGGQYNSNGVLGTGKYESAGRYVEPVNRHA
HLGSMEVNANLGGIADLVATTAYTTVKNRAQSDNTDLLLDLDYGYETFPAFSSWNESEDERKQFNQEVRLVSRHGGPFSW
VLGGFYNQQKRHRDYIEHVPNHPWVEFGTQPNPDEVEYASYVTSKVTEKAIFGEGTFRVTPAWQVTAGARYFGYNSKIAG
ALVVPLIGDPVSPYDLTPAGGTAKKTGWVWKFNSSFNFTPDIMLYGTYSKGYRIGGPNSVAPCPNPLPNDPDGDNINNTQ
LPCGLPNEVQYGPDTTRNAEIGLRAQLFERKLTFNFNVFQIKWDGIQVDSATLNGIVGITVNGGKAKSEGFETSFQLRPV
DRLSIQGTYSYVNARLTEDVPDNIPVNDPAGTYPSAPTKLDALAGDRLPGSAKNSGSLGVTYTMPFKDGQLVADWTATYR
GNVVTRLGWDRAYGDKLPGYVLHRASLTYDTDRYSIGLFANNIFDKYAVASVANDRSRVGLNDGVVLRYYKRTVINPRTV
GIEARFRY

Sequences:

>Translated_808_residues
MKMIRNTLLGATILMGVGTSSAWAQEPAAEGEPAGGSGEIVVTATRRATSLQDVPINISAVGAEQLSRQRIDDVRDIADF
TPGMTISDTGPGSTGTIVLRGLNASDTDTTGASYDDSLGVYLGEVPIYYDFKMLDIARVETLLGPQGTLYGLGTLAGAIR
NIPNRPDLTAYQAEAHGRAYGKSHSSQVGYQADGMINIPLVTDHIAFRSATGYFYDPGFIDYPLLLQTPGVSLPQPSGPD
GVTEADYAANLKRRKDLNFERTFTTRNQLLFQLNEDLKVNFTYAYQQTKTDGGQYNSNGVLGTGKYESAGRYVEPVNRHA
HLGSMEVNANLGGIADLVATTAYTTVKNRAQSDNTDLLLDLDYGYETFPAFSSWNESEDERKQFNQEVRLVSRHGGPFSW
VLGGFYNQQKRHRDYIEHVPNHPWVEFGTQPNPDEVEYASYVTSKVTEKAIFGEGTFRVTPAWQVTAGARYFGYNSKIAG
ALVVPLIGDPVSPYDLTPAGGTAKKTGWVWKFNSSFNFTPDIMLYGTYSKGYRIGGPNSVAPCPNPLPNDPDGDNINNTQ
LPCGLPNEVQYGPDTTRNAEIGLRAQLFERKLTFNFNVFQIKWDGIQVDSATLNGIVGITVNGGKAKSEGFETSFQLRPV
DRLSIQGTYSYVNARLTEDVPDNIPVNDPAGTYPSAPTKLDALAGDRLPGSAKNSGSLGVTYTMPFKDGQLVADWTATYR
GNVVTRLGWDRAYGDKLPGYVLHRASLTYDTDRYSIGLFANNIFDKYAVASVANDRSRVGLNDGVVLRYYKRTVINPRTV
GIEARFRY
>Mature_808_residues
MKMIRNTLLGATILMGVGTSSAWAQEPAAEGEPAGGSGEIVVTATRRATSLQDVPINISAVGAEQLSRQRIDDVRDIADF
TPGMTISDTGPGSTGTIVLRGLNASDTDTTGASYDDSLGVYLGEVPIYYDFKMLDIARVETLLGPQGTLYGLGTLAGAIR
NIPNRPDLTAYQAEAHGRAYGKSHSSQVGYQADGMINIPLVTDHIAFRSATGYFYDPGFIDYPLLLQTPGVSLPQPSGPD
GVTEADYAANLKRRKDLNFERTFTTRNQLLFQLNEDLKVNFTYAYQQTKTDGGQYNSNGVLGTGKYESAGRYVEPVNRHA
HLGSMEVNANLGGIADLVATTAYTTVKNRAQSDNTDLLLDLDYGYETFPAFSSWNESEDERKQFNQEVRLVSRHGGPFSW
VLGGFYNQQKRHRDYIEHVPNHPWVEFGTQPNPDEVEYASYVTSKVTEKAIFGEGTFRVTPAWQVTAGARYFGYNSKIAG
ALVVPLIGDPVSPYDLTPAGGTAKKTGWVWKFNSSFNFTPDIMLYGTYSKGYRIGGPNSVAPCPNPLPNDPDGDNINNTQ
LPCGLPNEVQYGPDTTRNAEIGLRAQLFERKLTFNFNVFQIKWDGIQVDSATLNGIVGITVNGGKAKSEGFETSFQLRPV
DRLSIQGTYSYVNARLTEDVPDNIPVNDPAGTYPSAPTKLDALAGDRLPGSAKNSGSLGVTYTMPFKDGQLVADWTATYR
GNVVTRLGWDRAYGDKLPGYVLHRASLTYDTDRYSIGLFANNIFDKYAVASVANDRSRVGLNDGVVLRYYKRTVINPRTV
GIEARFRY

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88387; Mature: 88387

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMIRNTLLGATILMGVGTSSAWAQEPAAEGEPAGGSGEIVVTATRRATSLQDVPINISA
CCHHHHHHHHEEEEEECCCCCHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEE
VGAEQLSRQRIDDVRDIADFTPGMTISDTGPGSTGTIVLRGLNASDTDTTGASYDDSLGV
CCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCE
YLGEVPIYYDFKMLDIARVETLLGPQGTLYGLGTLAGAIRNIPNRPDLTAYQAEAHGRAY
EEECCCEEEEEEEHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCEEEECCCCCCCC
GKSHSSQVGYQADGMINIPLVTDHIAFRSATGYFYDPGFIDYPLLLQTPGVSLPQPSGPD
CCCCCCCCCEECCCEEECCEEECCCEEECCCCCEECCCCCCCCEEEECCCCCCCCCCCCC
GVTEADYAANLKRRKDLNFERTFTTRNQLLFQLNEDLKVNFTYAYQQTKTDGGQYNSNGV
CCCCCHHHHHHHHHHCCCEEEEECHHCEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCE
LGTGKYESAGRYVEPVNRHAHLGSMEVNANLGGIADLVATTAYTTVKNRAQSDNTDLLLD
EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE
LDYGYETFPAFSSWNESEDERKQFNQEVRLVSRHGGPFSWVLGGFYNQQKRHRDYIEHVP
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHCCHHHHHHHHHHHHHHCC
NHPWVEFGTQPNPDEVEYASYVTSKVTEKAIFGEGTFRVTPAWQVTAGARYFGYNSKIAG
CCCCEECCCCCCCCCHHHHHHHHHHHHHHHEECCCEEEECCCEEEECCCEEECCCCCCCC
ALVVPLIGDPVSPYDLTPAGGTAKKTGWVWKFNSSFNFTPDIMLYGTYSKGYRIGGPNSV
EEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCEECCCCCCC
APCPNPLPNDPDGDNINNTQLPCGLPNEVQYGPDTTRNAEIGLRAQLFERKLTFNFNVFQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEEEEEE
IKWDGIQVDSATLNGIVGITVNGGKAKSEGFETSFQLRPVDRLSIQGTYSYVNARLTEDV
EEECCEEECCEEECEEEEEEEECCCCCCCCCCCEEEECCCCEEEEEEEEEEEEEEECCCC
PDNIPVNDPAGTYPSAPTKLDALAGDRLPGSAKNSGSLGVTYTMPFKDGQLVADWTATYR
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECC
GNVVTRLGWDRAYGDKLPGYVLHRASLTYDTDRYSIGLFANNIFDKYAVASVANDRSRVG
CCEEEEECCCHHHCCCCCCEEEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHCCCCCCCC
LNDGVVLRYYKRTVINPRTVGIEARFRY
CCCCEEEEEEHHHHCCCEEEEEEEEECC
>Mature Secondary Structure
MKMIRNTLLGATILMGVGTSSAWAQEPAAEGEPAGGSGEIVVTATRRATSLQDVPINISA
CCHHHHHHHHEEEEEECCCCCHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEE
VGAEQLSRQRIDDVRDIADFTPGMTISDTGPGSTGTIVLRGLNASDTDTTGASYDDSLGV
CCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCE
YLGEVPIYYDFKMLDIARVETLLGPQGTLYGLGTLAGAIRNIPNRPDLTAYQAEAHGRAY
EEECCCEEEEEEEHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCEEEECCCCCCCC
GKSHSSQVGYQADGMINIPLVTDHIAFRSATGYFYDPGFIDYPLLLQTPGVSLPQPSGPD
CCCCCCCCCEECCCEEECCEEECCCEEECCCCCEECCCCCCCCEEEECCCCCCCCCCCCC
GVTEADYAANLKRRKDLNFERTFTTRNQLLFQLNEDLKVNFTYAYQQTKTDGGQYNSNGV
CCCCCHHHHHHHHHHCCCEEEEECHHCEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCE
LGTGKYESAGRYVEPVNRHAHLGSMEVNANLGGIADLVATTAYTTVKNRAQSDNTDLLLD
EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE
LDYGYETFPAFSSWNESEDERKQFNQEVRLVSRHGGPFSWVLGGFYNQQKRHRDYIEHVP
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHCCHHHHHHHHHHHHHHCC
NHPWVEFGTQPNPDEVEYASYVTSKVTEKAIFGEGTFRVTPAWQVTAGARYFGYNSKIAG
CCCCEECCCCCCCCCHHHHHHHHHHHHHHHEECCCEEEECCCEEEECCCEEECCCCCCCC
ALVVPLIGDPVSPYDLTPAGGTAKKTGWVWKFNSSFNFTPDIMLYGTYSKGYRIGGPNSV
EEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCEECCCCCCC
APCPNPLPNDPDGDNINNTQLPCGLPNEVQYGPDTTRNAEIGLRAQLFERKLTFNFNVFQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEEEEEE
IKWDGIQVDSATLNGIVGITVNGGKAKSEGFETSFQLRPVDRLSIQGTYSYVNARLTEDV
EEECCEEECCEEECEEEEEEEECCCCCCCCCCCEEEECCCCEEEEEEEEEEEEEEECCCC
PDNIPVNDPAGTYPSAPTKLDALAGDRLPGSAKNSGSLGVTYTMPFKDGQLVADWTATYR
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECC
GNVVTRLGWDRAYGDKLPGYVLHRASLTYDTDRYSIGLFANNIFDKYAVASVANDRSRVG
CCEEEEECCCHHHCCCCCCEEEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHCCCCCCCC
LNDGVVLRYYKRTVINPRTVGIEARFRY
CCCCEEEEEEHHHHCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA