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The map label for this gene is oxaA [H]

Identifier: 87198602

GI number: 87198602

Start: 624133

End: 625935

Strand: Direct

Name: oxaA [H]

Synonym: Saro_0578

Alternate gene names: 87198602

Gene position: 624133-625935 (Clockwise)

Preceding gene: 87198601

Following gene: 87198603

Centisome position: 17.52

GC content: 63.95

Gene sequence:

>1803_bases
GTGCAGAATCAGCGCAACCTCATCATGGCAGTGGTCCTTACCGGCATCCTGCTGCTCGGCTGGGACGTCGCGATGCGCTG
GTTCTACCCGCAGCCGGCGCAAAAGCCCAAGGTCGAAGCCGCCGCATCGGCAGAACCCGCCAATGGCGAAAAGCCCAAGC
GCACGCGCGAAGGCGGCCTCCAGAACGCGGGCGACATCGCGCTCGAGAAGAAGGACCTGGCCCAGGAACTGGCGGCCGGT
CACCGCATCGCCATCGATGCGCCGGGCCTCAAGGGCTCGATCAATCTCAAGGGTGCGCTGGTCGATGACGTGACGCTCGC
GCGCCACCGTGAAGGCGTGGACAGGAACAGCGCTCCCGTGCGCCTGTTCTCGCCCGCTGGCACCCCCGCGCAGCACTTTG
CCCAGATCGGCTGGGTCGGTGAAGGCGTCGCAGCGCCCGATGCCAACACCATGTGGCAGGCCGATGGCGCGAAGCTTACC
CCCCAGACTCCGGTCACGCTGCGCTGGACCAACGCTTCGGGACAGACCTACTCGATCCGCTATGCGATCGACGGCGACTA
CATGATCACGGCGACGCAGGGCGTCGCCAACACCGGTCCCGCGCCGGTCGTCGTCAGGCCTTTCGCGCTGGTCAACCGCA
CCGACAAGACCGCCAGCCTCGATACCTGGAACGTCCATTCCGGCCCGATCGGCGCGTTCGACGGCTCGGTGAACTTCGAC
AACAACTACTCGACCGTGGCCGAGGCCGAAGGCGGCGCGATTCCCTTCAAGGGCACCGCCAACTGGATCGGCTTTACCGA
CATCTACTGGCTCTCGGCGCTGATCCCCGATGCCAATGCCAAGGCAGAAGCCGCGTTCCGCTCGCTCGGCCAGGGCGTCT
ATCGCGCCGATCTCATCTATCCGTCGGTCTCGATCGCGCCGGGCAAGGCGCTGAGCCAGACCGTGCGTCTCTTCGCCGGC
GGCAAGGAAAACGCGGTTCTCGAGAAGTACGAGGCTGCGGGCGTCACCAATTTCAGCCTGTCCATCGACTGGGGCTGGTT
CCGCTGGTTCGAGAAGCCGATCTTCTGGCTGCTCGATTCGATCTTCAAGAAGGTCGGCAACTTCGGCGTCGCGATCATCC
TGCTCACGCTCATCGTGCGCGGCGTGATGTTCCCGATTGCCCAGCGCCAGTTCGCCTCGATGGCGGCGATGCGCGCGCTC
CAGCCCAAGATGAAGGCGATCCAGGAGCGCTACAAGGACGACAAGCAGAAGCAGCAGCAGGAAATCATGGAGCTGTACAA
GCGCGAGAAGGTAAATCCTCTCGCCGGTTGCCTCCCCATCTTCCTGCAGATCCCGGTGTTCTTCGCGCTCTACAAGGTGC
TGGTCCTGACCATCGAAATGCGTCACCAGCCTTTCGCGCTGTGGATCAAGGACCTTTCCGCGCCCGATCCGCTGCACGTG
CTGAACCTGTTCGGCCTGCTTCCGTTCGATCCGCCCAGCTTCCTCGGCATTGGCGTGCTGGCGATCCTGCTTGGCATCAC
CATGTGGCTCCAGTTCAAGCTGCAACCCGCGGCAATGGACCCGGCGCAGCAGCAGGTCTTCGCGTTCATGCCGTGGATCA
TGATGTTCGTCATGGCCCCCTTCGCGGCCGGCCTGCTGATCTACTGGATCACCTCGAACCTGCTGACCATCGCGCAGCAG
AAGTATCTCTACAGCCGCCACCCGCAGCTCAAGGCGCAGGCCGACAAGGACCAGGTCGACATCGACCGCGCCGTCACTCG
TGAAAAGAAGGCGACTTCCACCCGGAAGCCGAAGGCGCGTTGA

Upstream 100 bases:

>100_bases
CCGTGGGGTGGGCACGGCTACGATCCCGTTCCCTGAGCCTTCCCCCGAACCGAATTGAAGCCGCCTCGCGCGGGCATTGA
CTGACAGGACGCGAAACACG

Downstream 100 bases:

>100_bases
CCCCCGAAGAACAAGCCGCTCACCAGGAACTGATCGAACAGGCGCGGCTGCTCTTCGCGGGCCGCGTCGAATTCCTGAAG
TCCGCCCCCGCGCTCAAGTT

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MQNQRNLIMAVVLTGILLLGWDVAMRWFYPQPAQKPKVEAAASAEPANGEKPKRTREGGLQNAGDIALEKKDLAQELAAG
HRIAIDAPGLKGSINLKGALVDDVTLARHREGVDRNSAPVRLFSPAGTPAQHFAQIGWVGEGVAAPDANTMWQADGAKLT
PQTPVTLRWTNASGQTYSIRYAIDGDYMITATQGVANTGPAPVVVRPFALVNRTDKTASLDTWNVHSGPIGAFDGSVNFD
NNYSTVAEAEGGAIPFKGTANWIGFTDIYWLSALIPDANAKAEAAFRSLGQGVYRADLIYPSVSIAPGKALSQTVRLFAG
GKENAVLEKYEAAGVTNFSLSIDWGWFRWFEKPIFWLLDSIFKKVGNFGVAIILLTLIVRGVMFPIAQRQFASMAAMRAL
QPKMKAIQERYKDDKQKQQQEIMELYKREKVNPLAGCLPIFLQIPVFFALYKVLVLTIEMRHQPFALWIKDLSAPDPLHV
LNLFGLLPFDPPSFLGIGVLAILLGITMWLQFKLQPAAMDPAQQQVFAFMPWIMMFVMAPFAAGLLIYWITSNLLTIAQQ
KYLYSRHPQLKAQADKDQVDIDRAVTREKKATSTRKPKAR

Sequences:

>Translated_600_residues
MQNQRNLIMAVVLTGILLLGWDVAMRWFYPQPAQKPKVEAAASAEPANGEKPKRTREGGLQNAGDIALEKKDLAQELAAG
HRIAIDAPGLKGSINLKGALVDDVTLARHREGVDRNSAPVRLFSPAGTPAQHFAQIGWVGEGVAAPDANTMWQADGAKLT
PQTPVTLRWTNASGQTYSIRYAIDGDYMITATQGVANTGPAPVVVRPFALVNRTDKTASLDTWNVHSGPIGAFDGSVNFD
NNYSTVAEAEGGAIPFKGTANWIGFTDIYWLSALIPDANAKAEAAFRSLGQGVYRADLIYPSVSIAPGKALSQTVRLFAG
GKENAVLEKYEAAGVTNFSLSIDWGWFRWFEKPIFWLLDSIFKKVGNFGVAIILLTLIVRGVMFPIAQRQFASMAAMRAL
QPKMKAIQERYKDDKQKQQQEIMELYKREKVNPLAGCLPIFLQIPVFFALYKVLVLTIEMRHQPFALWIKDLSAPDPLHV
LNLFGLLPFDPPSFLGIGVLAILLGITMWLQFKLQPAAMDPAQQQVFAFMPWIMMFVMAPFAAGLLIYWITSNLLTIAQQ
KYLYSRHPQLKAQADKDQVDIDRAVTREKKATSTRKPKAR
>Mature_600_residues
MQNQRNLIMAVVLTGILLLGWDVAMRWFYPQPAQKPKVEAAASAEPANGEKPKRTREGGLQNAGDIALEKKDLAQELAAG
HRIAIDAPGLKGSINLKGALVDDVTLARHREGVDRNSAPVRLFSPAGTPAQHFAQIGWVGEGVAAPDANTMWQADGAKLT
PQTPVTLRWTNASGQTYSIRYAIDGDYMITATQGVANTGPAPVVVRPFALVNRTDKTASLDTWNVHSGPIGAFDGSVNFD
NNYSTVAEAEGGAIPFKGTANWIGFTDIYWLSALIPDANAKAEAAFRSLGQGVYRADLIYPSVSIAPGKALSQTVRLFAG
GKENAVLEKYEAAGVTNFSLSIDWGWFRWFEKPIFWLLDSIFKKVGNFGVAIILLTLIVRGVMFPIAQRQFASMAAMRAL
QPKMKAIQERYKDDKQKQQQEIMELYKREKVNPLAGCLPIFLQIPVFFALYKVLVLTIEMRHQPFALWIKDLSAPDPLHV
LNLFGLLPFDPPSFLGIGVLAILLGITMWLQFKLQPAAMDPAQQQVFAFMPWIMMFVMAPFAAGLLIYWITSNLLTIAQQ
KYLYSRHPQLKAQADKDQVDIDRAVTREKKATSTRKPKAR

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=412, Percent_Identity=35.4368932038835, Blast_Score=246, Evalue=4e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 66243; Mature: 66243

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNQRNLIMAVVLTGILLLGWDVAMRWFYPQPAQKPKVEAAASAEPANGEKPKRTREGGL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHCCC
QNAGDIALEKKDLAQELAAGHRIAIDAPGLKGSINLKGALVDDVTLARHREGVDRNSAPV
CCCCCCEECHHHHHHHHHCCCEEEEECCCCCCCEEECEEEEHHHHHHHHHCCCCCCCCCE
RLFSPAGTPAQHFAQIGWVGEGVAAPDANTMWQADGAKLTPQTPVTLRWTNASGQTYSIR
EEECCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCEECCCCCEEEEEECCCCCEEEEE
YAIDGDYMITATQGVANTGPAPVVVRPFALVNRTDKTASLDTWNVHSGPIGAFDGSVNFD
EEECCCEEEEEECCCCCCCCCCEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NNYSTVAEAEGGAIPFKGTANWIGFTDIYWLSALIPDANAKAEAAFRSLGQGVYRADLIY
CCCCEEEECCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHEEC
PSVSIAPGKALSQTVRLFAGGKENAVLEKYEAAGVTNFSLSIDWGWFRWFEKPIFWLLDS
CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHH
IFKKVGNFGVAIILLTLIVRGVMFPIAQRQFASMAAMRALQPKMKAIQERYKDDKQKQQQ
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIMELYKREKVNPLAGCLPIFLQIPVFFALYKVLVLTIEMRHQPFALWIKDLSAPDPLHV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHEECCCCCCHHHH
LNLFGLLPFDPPSFLGIGVLAILLGITMWLQFKLQPAAMDPAQQQVFAFMPWIMMFVMAP
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHH
FAAGLLIYWITSNLLTIAQQKYLYSRHPQLKAQADKDQVDIDRAVTREKKATSTRKPKAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQNQRNLIMAVVLTGILLLGWDVAMRWFYPQPAQKPKVEAAASAEPANGEKPKRTREGGL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHCCC
QNAGDIALEKKDLAQELAAGHRIAIDAPGLKGSINLKGALVDDVTLARHREGVDRNSAPV
CCCCCCEECHHHHHHHHHCCCEEEEECCCCCCCEEECEEEEHHHHHHHHHCCCCCCCCCE
RLFSPAGTPAQHFAQIGWVGEGVAAPDANTMWQADGAKLTPQTPVTLRWTNASGQTYSIR
EEECCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCEECCCCCEEEEEECCCCCEEEEE
YAIDGDYMITATQGVANTGPAPVVVRPFALVNRTDKTASLDTWNVHSGPIGAFDGSVNFD
EEECCCEEEEEECCCCCCCCCCEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NNYSTVAEAEGGAIPFKGTANWIGFTDIYWLSALIPDANAKAEAAFRSLGQGVYRADLIY
CCCCEEEECCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHEEC
PSVSIAPGKALSQTVRLFAGGKENAVLEKYEAAGVTNFSLSIDWGWFRWFEKPIFWLLDS
CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHH
IFKKVGNFGVAIILLTLIVRGVMFPIAQRQFASMAAMRALQPKMKAIQERYKDDKQKQQQ
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIMELYKREKVNPLAGCLPIFLQIPVFFALYKVLVLTIEMRHQPFALWIKDLSAPDPLHV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHEECCCCCCHHHH
LNLFGLLPFDPPSFLGIGVLAILLGITMWLQFKLQPAAMDPAQQQVFAFMPWIMMFVMAP
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHH
FAAGLLIYWITSNLLTIAQQKYLYSRHPQLKAQADKDQVDIDRAVTREKKATSTRKPKAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA