Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
---|---|
Accession | NC_007794 |
Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is camC [H]
Identifier: 87198538
GI number: 87198538
Start: 555434
End: 556699
Strand: Direct
Name: camC [H]
Synonym: Saro_0514
Alternate gene names: 87198538
Gene position: 555434-556699 (Clockwise)
Preceding gene: 87198537
Following gene: 87198539
Centisome position: 15.6
GC content: 62.4
Gene sequence:
>1266_bases ATGAACGCCCAAACTTCTACGGCGACCCAGAAGCATCGCGTTGCTCCGCCGCCACACGTGCCGGGCCATCTGATCCGGGA GATCGACGCATACGACCTGGACGGCCTGGAGCAGGGTTTCCACGAAGCATGGAAGCGGGTGCAGCAACCCGATACGCCGC CGCTCGTCTGGACGCCGTTCACTGGCGGGCACTGGATCGCAACCCGCGGTACCTTGATCGACGAGATCTATCGCAGCCCC GAACGCTTCTCCAGCCGCGTGATCTGGGTCCCGCGCGAAGCGGGCGAGGCGTACGACATGGTGCCGACCAAGCTCGATCC GCCCGAGCATACACCCTATCGCAAGGCGATCGACAAGGGCCTGAACCTTGCGGAAATCCGCAAGCTCGAGGACCAGATCC GGACCATCGCGGTCGAGATCATCGAAGGCTTCGCCGATCGCGGCCATTGTGAGTTCGGCAGCGAGTTCTCGACGGTGTTT CCAGTCAGGGTGTTTCTCGCGCTGGCCGGGCTGCCGGTTGAAGATGCCACGAAGCTTGGCCTTCTGGCGAACGAGATGAC GCGGCCCTCGGGCAACACGCCGGAAGAGCAGGGGCGGTCGCTGGAAGCGGCAAACAAGGGATTTTTCGAGTACGTCGCGC CGATCATCGCTGCGCGCAGGGGAGGCAGTGGTACTGACCTCATCACGCGCATTCTCAACGTCGAAATCGACGGCAAGCCG ATGCCCGACGACCGTGCGCTAGGCCTGGTTTCGCTCCTGCTGCTCGGAGGGCTCGACACTGTCGTCAACTTCCTCGGCTT CATGATGATCTACCTTTCCCGGCACCCCGAAACGGTTGCCGAAATGCGGCGCGAACCATTGAAGCTGCAACGCGGCGTTG AAGAGCTGTTCCGTCGCTTCGCGGTCGTTTCGGATGCACGATATGTCGTTTCGGACATGGAGTTCCATGGCACCATGCTT AAGGAGGGCGACCTCATCCTCCTGCCAACGGCTCTGCACGGGCTTGACGACAGGCATCATGACGATCCCATGACCGTCGA CCTGTCGCGGCGCGATGTCACTCACTCGACTTTCGCCCAGGGGCCGCACCGCTGCGCGGGCATGCACCTCGCGCGCCTCG AGGTGACGGTCATGCTGCAGGAATGGCTGGCCCGCATTCCGGAATTCAGGCTGAAGGACAGGGCAGTGCCAATCTACCAT TCAGGCATCGTCGCGGCGGTCGAGAACATTCCACTGGAATGGGAGCCTCAGAGGGTTTCGGCATGA
Upstream 100 bases:
>100_bases TGCATGCCACCAAGACCGGAACCGCGACCAAGGCGGTCATCGACCCGTCGATCAGCTGATCGAACGAGCCCGGCCGGACA GAATCTTAAGGACAGGAACA
Downstream 100 bases:
>100_bases TGGATGACGAGAAGGCGCATTTCCGCAAGGTCCTCGGGCATTATCCGACAGGTGTCTGTGCCATCACCGCCAAAACGCCC GACGGCACCGCCACCGCGAT
Product: cytochrome P450
Products: NA
Alternate protein names: Cytochrome P450-cam; Cytochrome P450cam [H]
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MNAQTSTATQKHRVAPPPHVPGHLIREIDAYDLDGLEQGFHEAWKRVQQPDTPPLVWTPFTGGHWIATRGTLIDEIYRSP ERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPYRKAIDKGLNLAEIRKLEDQIRTIAVEIIEGFADRGHCEFGSEFSTVF PVRVFLALAGLPVEDATKLGLLANEMTRPSGNTPEEQGRSLEAANKGFFEYVAPIIAARRGGSGTDLITRILNVEIDGKP MPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPLKLQRGVEELFRRFAVVSDARYVVSDMEFHGTML KEGDLILLPTALHGLDDRHHDDPMTVDLSRRDVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRAVPIYH SGIVAAVENIPLEWEPQRVSA
Sequences:
>Translated_421_residues MNAQTSTATQKHRVAPPPHVPGHLIREIDAYDLDGLEQGFHEAWKRVQQPDTPPLVWTPFTGGHWIATRGTLIDEIYRSP ERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPYRKAIDKGLNLAEIRKLEDQIRTIAVEIIEGFADRGHCEFGSEFSTVF PVRVFLALAGLPVEDATKLGLLANEMTRPSGNTPEEQGRSLEAANKGFFEYVAPIIAARRGGSGTDLITRILNVEIDGKP MPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPLKLQRGVEELFRRFAVVSDARYVVSDMEFHGTML KEGDLILLPTALHGLDDRHHDDPMTVDLSRRDVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRAVPIYH SGIVAAVENIPLEWEPQRVSA >Mature_421_residues MNAQTSTATQKHRVAPPPHVPGHLIREIDAYDLDGLEQGFHEAWKRVQQPDTPPLVWTPFTGGHWIATRGTLIDEIYRSP ERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPYRKAIDKGLNLAEIRKLEDQIRTIAVEIIEGFADRGHCEFGSEFSTVF PVRVFLALAGLPVEDATKLGLLANEMTRPSGNTPEEQGRSLEAANKGFFEYVAPIIAARRGGSGTDLITRILNVEIDGKP MPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPLKLQRGVEELFRRFAVVSDARYVVSDMEFHGTML KEGDLILLPTALHGLDDRHHDDPMTVDLSRRDVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRAVPIYH SGIVAAVENIPLEWEPQRVSA
Specific function: Involved in a camphor oxidation system [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: =1.14.15.1 [H]
Molecular weight: Translated: 47276; Mature: 47276
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAQTSTATQKHRVAPPPHVPGHLIREIDAYDLDGLEQGFHEAWKRVQQPDTPPLVWTPF CCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECC TGGHWIATRGTLIDEIYRSPERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPYRKAIDKG CCCEEEEECCHHHHHHHCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCC LNLAEIRKLEDQIRTIAVEIIEGFADRGHCEFGSEFSTVFPVRVFLALAGLPVEDATKLG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH LLANEMTRPSGNTPEEQGRSLEAANKGFFEYVAPIIAARRGGSGTDLITRILNVEIDGKP HHHHHHCCCCCCCCHHHCCCHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHCEECCCC MPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPLKLQRGVEELFRRF CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AVVSDARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRRDVTHSTFAQ HHHHCCHHHHHHHHHHCCEECCCCEEEEEHHHHCCCCCCCCCCCEEECCCCCCCHHHHHC GPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRAVPIYHSGIVAAVENIPLEWEPQRVS CCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCEECCHHHHHHHCCCCCCCCHHCC A C >Mature Secondary Structure MNAQTSTATQKHRVAPPPHVPGHLIREIDAYDLDGLEQGFHEAWKRVQQPDTPPLVWTPF CCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECC TGGHWIATRGTLIDEIYRSPERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPYRKAIDKG CCCEEEEECCHHHHHHHCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCC LNLAEIRKLEDQIRTIAVEIIEGFADRGHCEFGSEFSTVFPVRVFLALAGLPVEDATKLG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH LLANEMTRPSGNTPEEQGRSLEAANKGFFEYVAPIIAARRGGSGTDLITRILNVEIDGKP HHHHHHCCCCCCCCHHHCCCHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHCEECCCC MPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPLKLQRGVEELFRRF CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AVVSDARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRRDVTHSTFAQ HHHHCCHHHHHHHHHHCCEECCCCEEEEEHHHHCCCCCCCCCCCEEECCCCCCCHHHHHC GPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRAVPIYHSGIVAAVENIPLEWEPQRVS CCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCEECCHHHHHHHCCCCCCCCHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3003058; 2613690; 7130171; 3813557; 2578028; 1610873; 12237225; 4066706; 9357977; 9649301; 10557259; 10698731; 11098139; 11258878; 11606730; 12464241; 9315686 [H]