Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198530
Identifier: 87198530
GI number: 87198530
Start: 548331
End: 548717
Strand: Direct
Name: 87198530
Synonym: Saro_0505
Alternate gene names: NA
Gene position: 548331-548717 (Clockwise)
Preceding gene: 87198529
Following gene: 87198537
Centisome position: 15.4
GC content: 62.53
Gene sequence:
>387_bases ATGACTGACGATTTCGAAGCGCTGACCGTCGATCAATATGTTCGTGAGGCCGCGCGGACCGACCAGCGCAAGGGACCGGG AACGATCGGCTTCACTATGTTGGGTCTGGTCGGCGAGACCGGCAGCCTGCTCGCCGAAGCCAAGAAGAAGCAGCGCGATG CCGCATCCTACCTGGGCTATGCCGAAGCTGTCGCTGAGGAGATTGGTGATGTGCTCTGGTATCTGGCCGCAGTGGCGCGC CGGCATCGGCTGGCGCTGAGCGATATCGCCGCCGCGGCGCTGATCACCGACGGCGTCTATCGCGCCGGGGACAATGCTGC CCTCAGCCTGCACGCGTTACAGCCGGCGCATATAAACTGCTCGTCTTTGCCGATCTTGACGGGTTAA
Upstream 100 bases:
>100_bases ATACCCGTGAGCCGATCCGCATGGTCGTTCTGAGGGCGTTGGCGGCCTACGGCGTGACGGTGCCCGAGGGCGCGATCACC GATCGGCGGAAGCGCAGCTA
Downstream 100 bases:
>100_bases AGAACCTGAATGACGAGATGGGCCATGAGATCGGAGACAACGGCCTTCGGGATTTCGCGGACCGTGCCAGAAGCGCAATT CGGAAGAATGACCTCTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTDDFEALTVDQYVREAARTDQRKGPGTIGFTMLGLVGETGSLLAEAKKKQRDAASYLGYAEAVAEEIGDVLWYLAAVAR RHRLALSDIAAAALITDGVYRAGDNAALSLHALQPAHINCSSLPILTG
Sequences:
>Translated_128_residues MTDDFEALTVDQYVREAARTDQRKGPGTIGFTMLGLVGETGSLLAEAKKKQRDAASYLGYAEAVAEEIGDVLWYLAAVAR RHRLALSDIAAAALITDGVYRAGDNAALSLHALQPAHINCSSLPILTG >Mature_127_residues TDDFEALTVDQYVREAARTDQRKGPGTIGFTMLGLVGETGSLLAEAKKKQRDAASYLGYAEAVAEEIGDVLWYLAAVARR HRLALSDIAAAALITDGVYRAGDNAALSLHALQPAHINCSSLPILTG
Specific function: Unknown
COG id: COG1694
COG function: function code R; Predicted pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13603; Mature: 13471
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDFEALTVDQYVREAARTDQRKGPGTIGFTMLGLVGETGSLLAEAKKKQRDAASYLGY CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AEAVAEEIGDVLWYLAAVARRHRLALSDIAAAALITDGVYRAGDNAALSLHALQPAHINC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC SSLPILTG CCCCCCCC >Mature Secondary Structure TDDFEALTVDQYVREAARTDQRKGPGTIGFTMLGLVGETGSLLAEAKKKQRDAASYLGY CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AEAVAEEIGDVLWYLAAVARRHRLALSDIAAAALITDGVYRAGDNAALSLHALQPAHINC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC SSLPILTG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA