Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198459
Identifier: 87198459
GI number: 87198459
Start: 471997
End: 472533
Strand: Direct
Name: 87198459
Synonym: Saro_0434
Alternate gene names: NA
Gene position: 471997-472533 (Clockwise)
Preceding gene: 87198457
Following gene: 87198460
Centisome position: 13.25
GC content: 71.69
Gene sequence:
>537_bases ATGGCAAAGCGCCAGACCATCCAGCGCGCGCGTGCGCCGCATCTGATCCTGCTCAGCGATGCACGCAACGATGCGGCGCT GGCCCGCGCGATCGCGCGGCTGCCGCGCGGGTCGGCGCTGGTCTTCCGGCACTATCACCTGCCTGCTCACGAACGGCGGC GGCGCTTTGCGGAACTGCGCCGGCTGGCAAGAGCGCGCGGCATCTCGATGATCGGCGCGCGCGTTCCCACCGCCTGGGGG GGCGAGGGCGTCTACGGAACTGCGCGCGAGGTGGCGGGAAGGCGGGGTATCCGGCTTGCCACCGCCCACTCGCTCGGTGA AGTCGCTGCCGCAGCGAGAGCAGGTGCCGACGCGGTCCTGCTATCCCCGGTTCATCCTACTCGCTCACATCCGGGAGCGC CGGTACTGGGCCCGGTGCGCTTCCTGCTGCTCGCGCGCCGGTCTCCGCTGCCGGTGATCGCGCTTGGCGGTATGACGGCG CGGCGTGCGGCGCGCTTGCCGGTGCATGGCTGGGCGGCTATCGACGGCCTCGCTTAA
Upstream 100 bases:
>100_bases GCGACCGGCGATGCGGGCTGCGGAAGCGATGCGGGCGCGAACCGCATCGAGCGGCGATGAAGGGACTGCCTGTTCCATGG CGCGGTGCTATAGCGCCGGG
Downstream 100 bases:
>100_bases GCCATTGCTCCAGCGCGATTCCCCGCGGGATTCTTGACGCTGACTCCCTAACCGGCGCATGATGGCCAAAGCAAGGGCAG GGATACGCGCAATCATGGCT
Product: thiamine monophosphate synthase
Products: diphosphate; thiamine monophosphate
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MAKRQTIQRARAPHLILLSDARNDAALARAIARLPRGSALVFRHYHLPAHERRRRFAELRRLARARGISMIGARVPTAWG GEGVYGTAREVAGRRGIRLATAHSLGEVAAAARAGADAVLLSPVHPTRSHPGAPVLGPVRFLLLARRSPLPVIALGGMTA RRAARLPVHGWAAIDGLA
Sequences:
>Translated_178_residues MAKRQTIQRARAPHLILLSDARNDAALARAIARLPRGSALVFRHYHLPAHERRRRFAELRRLARARGISMIGARVPTAWG GEGVYGTAREVAGRRGIRLATAHSLGEVAAAARAGADAVLLSPVHPTRSHPGAPVLGPVRFLLLARRSPLPVIALGGMTA RRAARLPVHGWAAIDGLA >Mature_177_residues AKRQTIQRARAPHLILLSDARNDAALARAIARLPRGSALVFRHYHLPAHERRRRFAELRRLARARGISMIGARVPTAWGG EGVYGTAREVAGRRGIRLATAHSLGEVAAAARAGADAVLLSPVHPTRSHPGAPVLGPVRFLLLARRSPLPVIALGGMTAR RAARLPVHGWAAIDGLA
Specific function: Unknown
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.5.1.3
Molecular weight: Translated: 19066; Mature: 18934
Theoretical pI: Translated: 12.65; Mature: 12.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRQTIQRARAPHLILLSDARNDAALARAIARLPRGSALVFRHYHLPAHERRRRFAELR CCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHH RLARARGISMIGARVPTAWGGEGVYGTAREVAGRRGIRLATAHSLGEVAAAARAGADAVL HHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCEEE LSPVHPTRSHPGAPVLGPVRFLLLARRSPLPVIALGGMTARRAARLPVHGWAAIDGLA EECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCHHCCCCC >Mature Secondary Structure AKRQTIQRARAPHLILLSDARNDAALARAIARLPRGSALVFRHYHLPAHERRRRFAELR CCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHH RLARARGISMIGARVPTAWGGEGVYGTAREVAGRRGIRLATAHSLGEVAAAARAGADAVL HHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCEEE LSPVHPTRSHPGAPVLGPVRFLLLARRSPLPVIALGGMTARRAARLPVHGWAAIDGLA EECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate; 4-Methyl-5-(2-phosphono-oxyethyl)-thiazole
Specific reaction: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + 4-methyl-5-(2-phosphono-oxyethyl)thiazole = diphosphate + thiamine monophosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA