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The map label for this gene is yebR [C]

Identifier: 87198156

GI number: 87198156

Start: 133354

End: 133836

Strand: Direct

Name: yebR [C]

Synonym: Saro_0130

Alternate gene names: 87198156

Gene position: 133354-133836 (Clockwise)

Preceding gene: 87198154

Following gene: 87198157

Centisome position: 3.74

GC content: 64.18

Gene sequence:

>483_bases
ATGTTTACTTTTGCACCCACGGAAGGCCATTCGCGGGCCGAACTCCACGCCGACCTTCTCGAAGCCGCGCGCGCACTGAC
CGATGGTGAACCCGACGGTGTCGCCAACATGGCCAACGTGGCCGCGCTGATCTGGCAGTTCCTGCCGGATCTCAATTGGG
CGGGCTTCTATCGCATGGTCGAGGGCGAACTTGTTCTCGGGCCTTTCGTCGGCAAGCCCGCCTGTATCCGCATTCCCCTG
GGCAAGGGTGTATGCGGAACCGCAGCCGCAAGCGGCGAGACCCAGCTTGTGGCCGATGTCCATGCCTTTCCGGGCCACAT
CGCCTGCGACGCGGCAAGCCGGTCCGAACTGGTCGTTCCTGTCCTGCGGGATGGTGGGGTGATCGCGGTGATCGATCTCG
ACAGCCCCTCGCCCTCGCGCTTCGATGAAGAGGATGCGCGCGGTATCGAAGCACTGGCACGGGCCATGGCTCACCGCATC
TGA

Upstream 100 bases:

>100_bases
ATCTATGCCCGGTGCCTTGCAAGGGCAATGGGACATTCGGGTAGCGAATGCGCAAGTTGCGCGGGGCGACTTTCGGCGGC
GGATGGGTTAGACGTCGGCC

Downstream 100 bases:

>100_bases
GTCCTGACACGCGATTTGGGCCTGATCCGATTCGGGACAGCAGCGACGACACCGCCTTACGAACCTTGGTTTCCTGCGGC
CCTTGATGGTAAGTTCGTGG

Product: putative GAF sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MFTFAPTEGHSRAELHADLLEAARALTDGEPDGVANMANVAALIWQFLPDLNWAGFYRMVEGELVLGPFVGKPACIRIPL
GKGVCGTAAASGETQLVADVHAFPGHIACDAASRSELVVPVLRDGGVIAVIDLDSPSPSRFDEEDARGIEALARAMAHRI

Sequences:

>Translated_160_residues
MFTFAPTEGHSRAELHADLLEAARALTDGEPDGVANMANVAALIWQFLPDLNWAGFYRMVEGELVLGPFVGKPACIRIPL
GKGVCGTAAASGETQLVADVHAFPGHIACDAASRSELVVPVLRDGGVIAVIDLDSPSPSRFDEEDARGIEALARAMAHRI
>Mature_160_residues
MFTFAPTEGHSRAELHADLLEAARALTDGEPDGVANMANVAALIWQFLPDLNWAGFYRMVEGELVLGPFVGKPACIRIPL
GKGVCGTAAASGETQLVADVHAFPGHIACDAASRSELVVPVLRDGGVIAVIDLDSPSPSRFDEEDARGIEALARAMAHRI

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=142, Percent_Identity=50, Blast_Score=155, Evalue=9e-40,
Organism=Saccharomyces cerevisiae, GI6322781, Length=154, Percent_Identity=44.8051948051948, Blast_Score=140, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 16888; Mature: 16888

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTFAPTEGHSRAELHADLLEAARALTDGEPDGVANMANVAALIWQFLPDLNWAGFYRMV
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEE
EGELVLGPFVGKPACIRIPLGKGVCGTAAASGETQLVADVHAFPGHIACDAASRSELVVP
CCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEE
VLRDGGVIAVIDLDSPSPSRFDEEDARGIEALARAMAHRI
EECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFTFAPTEGHSRAELHADLLEAARALTDGEPDGVANMANVAALIWQFLPDLNWAGFYRMV
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEE
EGELVLGPFVGKPACIRIPLGKGVCGTAAASGETQLVADVHAFPGHIACDAASRSELVVP
CCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEE
VLRDGGVIAVIDLDSPSPSRFDEEDARGIEALARAMAHRI
EECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9515924 [H]