Click here to switch to the map view.

The map label for this gene is 86751760

Identifier: 86751760

GI number: 86751760

Start: 5273404

End: 5274612

Strand: Reverse

Name: 86751760

Synonym: RPB_4662

Alternate gene names: NA

Gene position: 5274612-5273404 (Counterclockwise)

Preceding gene: 86751761

Following gene: 86751759

Centisome position: 98.93

GC content: 66.42

Gene sequence:

>1209_bases
ATGTCCACGATCCGACGTTTGCCGCCGCTATCCCGGCGTGCGCTGCTGACCGGCGCCGCGGGCGCCGCCACCATTGCAGT
CGCGCCGCGCTTCGCCACGCCCGCCATCGCGCAGACCTCGCCGCTCAAGGTCGGGCTGATGCTGCCCTACACCGGCACGT
TCGCGAAGCTCGGCCAGTTCATCGACGACGGCTTCCGGCTGCGCGTCGAGCAGGCCGGCGGTAAGCTCGGCGGGCGTGAT
GTGACCTTCGTGCAGGTCGACGACGAGTCCAAGCCGGAGGCCGCCACCGACAACATGAATCGCCTGGTCGGCCGTGAGAA
GGTCGACGTCGTGGTCGGCACCGTGCATTCCGGCGTCGCGATGGCGATGGTCAAGGTCGCGCGCGATAGCGGCACGCTGC
TGATCATTCCCAACGCCGGCGCCAACGACGCCACCGGACCGGCCTGCGCGCCGAACATCTTCCGCACCTCGTTCTCGAAC
TGGCAGACCACCTTCCCGATGGGCAAGGTGATGGCGGACGCGGGCATCAAGAATGTCGTCACCATCACCTGGAAGTACAC
CGCCGGCGCCGAAATGGTCGGCGCCTTCGCGGAGAACTTCACCAGGAACGGCGGCAAGATCGTCGAGGATCTGACGCTGC
CGTTCCCGCAGGTCGAATTCCAGGCGCTGATCACGCGCATCGCGCAGCTCAAACCCGACGCGGTGTTCAGCTTCTTCGCC
GGCGGCGGCGCGGTGAAATTCGTCAAGGACTACGCCGCGGCGGGCCTCAACAAGACGATTCCGCTGTATGGCGCGGGCTT
TCTCACCGACGGCACCATCGAGGCGCAGGGCGAGGCGGCCAACGGGATCAAGACGACGCTGCACTACGCCGACAATCTCG
ACAACCCCGCCAACGTCGCCTTCCTCAAGGCGTTCAAGGCCAAGACCCAGAAGGACGGCGACATCTACGCGGTGCAGGGC
TTTGACGCCGCCGCGCTGCTCGATATCGGCCTCGGCGCGGTGAAGGGCGATGCCGGCGCGCGCGACACGATGATCAAGGC
GATGGCGGCGGCCAAGATCGACAGTCCGCGCGGGCCGCTGTCGTTCAACAAGGCGCACAACCCGATCCAGAATATCTATC
TGCGCGAGGTGAAGAACGGCCGCAACGAAATGGTGTCGATCGCGCAAGCCGCTGTCGACGACCCGGCGCGCGGCTGCAAG
ATGACGTGA

Upstream 100 bases:

>100_bases
GGGCCTGGCGCGCTCGTGCGAAGGTGGCGATGTCGCTTTCGGACGGGATGCTCGGTCACAAGAACAAATCACCGAACGAC
ACCATCAAGGGGAGAACGCC

Downstream 100 bases:

>100_bases
CACCAAGTGCAGCGTCATGCGCGGGCTCGACCCGCGCATCCATCTTCTTCGGAAGATGGATTGCCGGGTCGAGCCCGGCA
ATGACGGGGGCACGGGAGAG

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MSTIRRLPPLSRRALLTGAAGAATIAVAPRFATPAIAQTSPLKVGLMLPYTGTFAKLGQFIDDGFRLRVEQAGGKLGGRD
VTFVQVDDESKPEAATDNMNRLVGREKVDVVVGTVHSGVAMAMVKVARDSGTLLIIPNAGANDATGPACAPNIFRTSFSN
WQTTFPMGKVMADAGIKNVVTITWKYTAGAEMVGAFAENFTRNGGKIVEDLTLPFPQVEFQALITRIAQLKPDAVFSFFA
GGGAVKFVKDYAAAGLNKTIPLYGAGFLTDGTIEAQGEAANGIKTTLHYADNLDNPANVAFLKAFKAKTQKDGDIYAVQG
FDAAALLDIGLGAVKGDAGARDTMIKAMAAAKIDSPRGPLSFNKAHNPIQNIYLREVKNGRNEMVSIAQAAVDDPARGCK
MT

Sequences:

>Translated_402_residues
MSTIRRLPPLSRRALLTGAAGAATIAVAPRFATPAIAQTSPLKVGLMLPYTGTFAKLGQFIDDGFRLRVEQAGGKLGGRD
VTFVQVDDESKPEAATDNMNRLVGREKVDVVVGTVHSGVAMAMVKVARDSGTLLIIPNAGANDATGPACAPNIFRTSFSN
WQTTFPMGKVMADAGIKNVVTITWKYTAGAEMVGAFAENFTRNGGKIVEDLTLPFPQVEFQALITRIAQLKPDAVFSFFA
GGGAVKFVKDYAAAGLNKTIPLYGAGFLTDGTIEAQGEAANGIKTTLHYADNLDNPANVAFLKAFKAKTQKDGDIYAVQG
FDAAALLDIGLGAVKGDAGARDTMIKAMAAAKIDSPRGPLSFNKAHNPIQNIYLREVKNGRNEMVSIAQAAVDDPARGCK
MT
>Mature_401_residues
STIRRLPPLSRRALLTGAAGAATIAVAPRFATPAIAQTSPLKVGLMLPYTGTFAKLGQFIDDGFRLRVEQAGGKLGGRDV
TFVQVDDESKPEAATDNMNRLVGREKVDVVVGTVHSGVAMAMVKVARDSGTLLIIPNAGANDATGPACAPNIFRTSFSNW
QTTFPMGKVMADAGIKNVVTITWKYTAGAEMVGAFAENFTRNGGKIVEDLTLPFPQVEFQALITRIAQLKPDAVFSFFAG
GGAVKFVKDYAAAGLNKTIPLYGAGFLTDGTIEAQGEAANGIKTTLHYADNLDNPANVAFLKAFKAKTQKDGDIYAVQGF
DAAALLDIGLGAVKGDAGARDTMIKAMAAAKIDSPRGPLSFNKAHNPIQNIYLREVKNGRNEMVSIAQAAVDDPARGCKM
T

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 42417; Mature: 42286

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIRRLPPLSRRALLTGAAGAATIAVAPRFATPAIAQTSPLKVGLMLPYTGTFAKLGQF
CCCCHHCCCCCHHHEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHH
IDDGFRLRVEQAGGKLGGRDVTFVQVDDESKPEAATDNMNRLVGREKVDVVVGTVHSGVA
HCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEEHHHHHH
MAMVKVARDSGTLLIIPNAGANDATGPACAPNIFRTSFSNWQTTFPMGKVMADAGIKNVV
HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCEEECCHHHHHHHCCCCEEE
TITWKYTAGAEMVGAFAENFTRNGGKIVEDLTLPFPQVEFQALITRIAQLKPDAVFSFFA
EEEEEECCCHHHHHHHHHHHHCCCCEEEHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHC
GGGAVKFVKDYAAAGLNKTIPLYGAGFLTDGTIEAQGEAANGIKTTLHYADNLDNPANVA
CCCHHHHHHHHHHCCCCCCCCEEECCEEECCEEEECCCCCCCCEEEEEECCCCCCCCHHH
FLKAFKAKTQKDGDIYAVQGFDAAALLDIGLGAVKGDAGARDTMIKAMAAAKIDSPRGPL
HHHHHHHCCCCCCCEEEECCCCHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCCCCCC
SFNKAHNPIQNIYLREVKNGRNEMVSIAQAAVDDPARGCKMT
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
STIRRLPPLSRRALLTGAAGAATIAVAPRFATPAIAQTSPLKVGLMLPYTGTFAKLGQF
CCCHHCCCCCHHHEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHH
IDDGFRLRVEQAGGKLGGRDVTFVQVDDESKPEAATDNMNRLVGREKVDVVVGTVHSGVA
HCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEEHHHHHH
MAMVKVARDSGTLLIIPNAGANDATGPACAPNIFRTSFSNWQTTFPMGKVMADAGIKNVV
HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCEEECCHHHHHHHCCCCEEE
TITWKYTAGAEMVGAFAENFTRNGGKIVEDLTLPFPQVEFQALITRIAQLKPDAVFSFFA
EEEEEECCCHHHHHHHHHHHHCCCCEEEHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHC
GGGAVKFVKDYAAAGLNKTIPLYGAGFLTDGTIEAQGEAANGIKTTLHYADNLDNPANVA
CCCHHHHHHHHHHCCCCCCCCEEECCEEECCEEEECCCCCCCCEEEEEECCCCCCCCHHH
FLKAFKAKTQKDGDIYAVQGFDAAALLDIGLGAVKGDAGARDTMIKAMAAAKIDSPRGPL
HHHHHHHCCCCCCCEEEECCCCHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCCCCCC
SFNKAHNPIQNIYLREVKNGRNEMVSIAQAAVDDPARGCKMT
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA