| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751705
Identifier: 86751705
GI number: 86751705
Start: 5203271
End: 5203657
Strand: Reverse
Name: 86751705
Synonym: RPB_4607
Alternate gene names: NA
Gene position: 5203657-5203271 (Counterclockwise)
Preceding gene: 86751710
Following gene: 86751704
Centisome position: 97.6
GC content: 60.98
Gene sequence:
>387_bases ATGGCCTTGACCGGGCTCGACAAGTGGTACGCCTTCATGAAATCCCACGACGCCGCGGCGTTGTGGGAGCTGCTGCATCC CGACGCGGTGTTCGAGAGCCCGGTCGTTCACACGCCGCAGGCCGGGCGCGACATCGTGTTCAAGTACCTCACGAGCGCCG AGAAGGTGCTGGGCGGCCCGGGTTTCAGCTATGTCGGCGAATGGCGCAGCGACAACGGCGCGGTGCTCGAGTTCGAGAAC GTGATCGACGGCATCAAGCTCAACGGCGTCGACATCATCACTTTCGCCGAGGATGGCCGTATTACCCGTTTCAAGGTCAT GGTAAGACCACTGAAAGCGATCAACCTGCTGCATCGGCTGATGGGAGAGCAACTGGCGCGACAATAA
Upstream 100 bases:
>100_bases GCGCGTGTCGATTGATGTTGCGGCGCCGCCTGTTCGGCAACATCCTCCCTCACCCCACGTTCCCTTTGTATTTATGTCTC GTTGATCTGGAGCGTCGCCG
Downstream 100 bases:
>100_bases GGCGCTGCGACCGGCCGAATTTCCCTCGCCGCCGTTCGAGATCACTCGGATGGCGGACACCTCACAACAATCCCGATCGA GAGAACCGCATGACGATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MALTGLDKWYAFMKSHDAAALWELLHPDAVFESPVVHTPQAGRDIVFKYLTSAEKVLGGPGFSYVGEWRSDNGAVLEFEN VIDGIKLNGVDIITFAEDGRITRFKVMVRPLKAINLLHRLMGEQLARQ
Sequences:
>Translated_128_residues MALTGLDKWYAFMKSHDAAALWELLHPDAVFESPVVHTPQAGRDIVFKYLTSAEKVLGGPGFSYVGEWRSDNGAVLEFEN VIDGIKLNGVDIITFAEDGRITRFKVMVRPLKAINLLHRLMGEQLARQ >Mature_127_residues ALTGLDKWYAFMKSHDAAALWELLHPDAVFESPVVHTPQAGRDIVFKYLTSAEKVLGGPGFSYVGEWRSDNGAVLEFENV IDGIKLNGVDIITFAEDGRITRFKVMVRPLKAINLLHRLMGEQLARQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14329; Mature: 14198
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTGLDKWYAFMKSHDAAALWELLHPDAVFESPVVHTPQAGRDIVFKYLTSAEKVLGGP CCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC GFSYVGEWRSDNGAVLEFENVIDGIKLNGVDIITFAEDGRITRFKVMVRPLKAINLLHRL CCCCCCCCCCCCCCEEEHHHHHCCEEECCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHH MGEQLARQ HHHHHHCC >Mature Secondary Structure ALTGLDKWYAFMKSHDAAALWELLHPDAVFESPVVHTPQAGRDIVFKYLTSAEKVLGGP CCCCHHHHHHHHHCCCHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC GFSYVGEWRSDNGAVLEFENVIDGIKLNGVDIITFAEDGRITRFKVMVRPLKAINLLHRL CCCCCCCCCCCCCCEEEHHHHHCCEEECCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHH MGEQLARQ HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA