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The map label for this gene is yjbQ [C]

Identifier: 86751665

GI number: 86751665

Start: 5167026

End: 5167499

Strand: Reverse

Name: yjbQ [C]

Synonym: RPB_4567

Alternate gene names: 86751665

Gene position: 5167499-5167026 (Counterclockwise)

Preceding gene: 86751666

Following gene: 86751663

Centisome position: 96.92

GC content: 68.35

Gene sequence:

>474_bases
ATGACTGCACCCCGCACGATGACGCGCGCGCCGGTGAGAGCAGCCTCGGTGACCCACGTCGCCTCGTCGCTGCTCACCGT
GCAGACCGGCGGCGCCGGCTTCCTCGATATCACTGGCGAAGCGGCGAAGTTCATCGCCGAGGCGAAGGCGCAGGACGGCG
CGTTGACGCTGTTCGTGCGCCACACCTCGGCGTCGCTGACGATCCAGGAGAACGCCGATCCGACGGTACTGATCGATCTC
GCCACGGTGCTGAACCGGCTGGCGCCGGAGAATGCGGGCTGGGCGCACGACACCGAGGGACCGGACGACATGCCGGCGCA
TGTCAAGGCGATGCTGACCGCGACCTCGCTGCAGATCCCGGTGCTGCAAGGCCGGCTCGCGCTGGGTACCTGGCAGGGCA
TCTATCTGATCGAGCACCGCCGCCGTCCGCACCGCCGCGAGATCGTGCTGCAGTTTCTCGGAACGACGCGCTGA

Upstream 100 bases:

>100_bases
GAGCGCGCCTGGCGGCGGCTGATCGAGATGGCCAACCGGATCCAGCGCGAAACCATCGGCGACGGCAAGACCTGAGCAGG
TTCTGGTCAGCGAGGTCCGC

Downstream 100 bases:

>100_bases
TCCCATGCGCATTCGAGCCGCAGCGTCATCCTGAGGTGCTCGCCGCGCCGCGGCGGGCCTCGAAGGATGAGCAACGACAC
TGTGGCCCATCCTTCGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MTAPRTMTRAPVRAASVTHVASSLLTVQTGGAGFLDITGEAAKFIAEAKAQDGALTLFVRHTSASLTIQENADPTVLIDL
ATVLNRLAPENAGWAHDTEGPDDMPAHVKAMLTATSLQIPVLQGRLALGTWQGIYLIEHRRRPHRREIVLQFLGTTR

Sequences:

>Translated_157_residues
MTAPRTMTRAPVRAASVTHVASSLLTVQTGGAGFLDITGEAAKFIAEAKAQDGALTLFVRHTSASLTIQENADPTVLIDL
ATVLNRLAPENAGWAHDTEGPDDMPAHVKAMLTATSLQIPVLQGRLALGTWQGIYLIEHRRRPHRREIVLQFLGTTR
>Mature_156_residues
TAPRTMTRAPVRAASVTHVASSLLTVQTGGAGFLDITGEAAKFIAEAKAQDGALTLFVRHTSASLTIQENADPTVLIDLA
TVLNRLAPENAGWAHDTEGPDDMPAHVKAMLTATSLQIPVLQGRLALGTWQGIYLIEHRRRPHRREIVLQFLGTTR

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=131, Percent_Identity=43.5114503816794, Blast_Score=110, Evalue=5e-26,
Organism=Drosophila melanogaster, GI221476594, Length=105, Percent_Identity=46.6666666666667, Blast_Score=109, Evalue=6e-25,
Organism=Drosophila melanogaster, GI221476589, Length=105, Percent_Identity=46.6666666666667, Blast_Score=109, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 16942; Mature: 16810

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPRTMTRAPVRAASVTHVASSLLTVQTGGAGFLDITGEAAKFIAEAKAQDGALTLFVR
CCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCEEEEECCHHHHHHHHHCCCCCEEEEEEE
HTSASLTIQENADPTVLIDLATVLNRLAPENAGWAHDTEGPDDMPAHVKAMLTATSLQIP
ECCCEEEEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEE
VLQGRLALGTWQGIYLIEHRRRPHRREIVLQFLGTTR
EECCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
TAPRTMTRAPVRAASVTHVASSLLTVQTGGAGFLDITGEAAKFIAEAKAQDGALTLFVR
CCCCCCCCCCCHHHHHHHHHHHHEEEECCCCEEEEECCHHHHHHHHHCCCCCEEEEEEE
HTSASLTIQENADPTVLIDLATVLNRLAPENAGWAHDTEGPDDMPAHVKAMLTATSLQIP
ECCCEEEEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEE
VLQGRLALGTWQGIYLIEHRRRPHRREIVLQFLGTTR
EECCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]