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The map label for this gene is ybbJ [H]

Identifier: 86751638

GI number: 86751638

Start: 5134462

End: 5134923

Strand: Reverse

Name: ybbJ [H]

Synonym: RPB_4540

Alternate gene names: 86751638

Gene position: 5134923-5134462 (Counterclockwise)

Preceding gene: 86751639

Following gene: 86751636

Centisome position: 96.31

GC content: 70.13

Gene sequence:

>462_bases
ATGGCTGAATTGTTTGTCGCGCTCGGCTCCTGGAACTGGCTGATCGTCGGCTTCGTGCTGATGGCGCTGGAGCTGCTCGC
GCCCGGGATCTTCCTGTTCTGGCTAGGCGTCGCCGCGCTCCTGACCGGCGTCGCGACCTTCGCGCTGGCTTCGGTGCTGG
CGCTGTCATGGCAGGCGCAGGCGCTGCTGTTCGCCGCGCTGGCGGTCGCCGCGGTGCCGCTGTGGCGGCGGATGGCGCGC
GGCGGCGCCGCCGAGTCCAGCACGACCAATCCGTTTCTCAACCGCCGCTCCGACGCGCTGGTCGGTCGCGTCTTCACCCT
GGAAAAACCGATCGAGGGCGGCGTCGGCACGGTGCGGATCGACGACACCTTCTGGCGCGTCACCGGCCCCGACGCGCCGG
CCGGCAGCAGGGTCAAAATCGTCCACGCCGACGGGGTGAATCTGACGGTGGCGGGGGTGTGA

Upstream 100 bases:

>100_bases
CGGGACGAGCCCGGCCATGACGGGGATGGACGGGCGAACGACGCGGCACGATAACGGGCGAGAAAGGCCGATGCTTTCGG
CGAGACTCTGAGGTGCAGCC

Downstream 100 bases:

>100_bases
GCGCCCTTAGCGCTGCCACACCCGCCCCGTCATCCTGAGGCGCGCGATCCGGCGCGCGTGAGCGTGACGGATCAAGCCTC
GAAGGATGAGCCGCAAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MAELFVALGSWNWLIVGFVLMALELLAPGIFLFWLGVAALLTGVATFALASVLALSWQAQALLFAALAVAAVPLWRRMAR
GGAAESSTTNPFLNRRSDALVGRVFTLEKPIEGGVGTVRIDDTFWRVTGPDAPAGSRVKIVHADGVNLTVAGV

Sequences:

>Translated_153_residues
MAELFVALGSWNWLIVGFVLMALELLAPGIFLFWLGVAALLTGVATFALASVLALSWQAQALLFAALAVAAVPLWRRMAR
GGAAESSTTNPFLNRRSDALVGRVFTLEKPIEGGVGTVRIDDTFWRVTGPDAPAGSRVKIVHADGVNLTVAGV
>Mature_152_residues
AELFVALGSWNWLIVGFVLMALELLAPGIFLFWLGVAALLTGVATFALASVLALSWQAQALLFAALAVAAVPLWRRMARG
GAAESSTTNPFLNRRSDALVGRVFTLEKPIEGGVGTVRIDDTFWRVTGPDAPAGSRVKIVHADGVNLTVAGV

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0826 [H]

Homologues:

Organism=Escherichia coli, GI145693099, Length=154, Percent_Identity=33.7662337662338, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR002810 [H]

Pfam domain/function: PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 16161; Mature: 16030

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELFVALGSWNWLIVGFVLMALELLAPGIFLFWLGVAALLTGVATFALASVLALSWQAQ
CCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLFAALAVAAVPLWRRMARGGAAESSTTNPFLNRRSDALVGRVFTLEKPIEGGVGTVRI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHEEECCCCCCCCEEEEE
DDTFWRVTGPDAPAGSRVKIVHADGVNLTVAGV
CCEEEEEECCCCCCCCEEEEEEECCCEEEEECC
>Mature Secondary Structure 
AELFVALGSWNWLIVGFVLMALELLAPGIFLFWLGVAALLTGVATFALASVLALSWQAQ
CCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLFAALAVAAVPLWRRMARGGAAESSTTNPFLNRRSDALVGRVFTLEKPIEGGVGTVRI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHEEECCCCCCCCEEEEE
DDTFWRVTGPDAPAGSRVKIVHADGVNLTVAGV
CCEEEEEECCCCCCCCEEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]