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The map label for this gene is yagT [H]

Identifier: 86751611

GI number: 86751611

Start: 5101166

End: 5101702

Strand: Reverse

Name: yagT [H]

Synonym: RPB_4513

Alternate gene names: 86751611

Gene position: 5101702-5101166 (Counterclockwise)

Preceding gene: 86751613

Following gene: 86751610

Centisome position: 95.69

GC content: 66.48

Gene sequence:

>537_bases
ATGACCGCCGATCGAAGTGCTGCTTCAGCCGGATCGATCCGGATCAATGGAGTCGACTGCCCGGTCCCGTCCGATCCCCG
CGTCTCCCTGCTCGACCTGCTGCGCGAGACCCTGCATCTCCACGGCACCAAGAAGGGCTGCAACCAGGGCGCCTGCGGCG
CCTGCACCGTGCTGGTCGACGGCGAGCGCATCGTCTCGTGCCTGACGCTCGCCGTGCAATATGCGGGGCGCGGCGTCACG
ACGATCGAGGGCCTCGCCGACGACCACGGGCTGCATCGGTTGCAGCAGGCCTTCATCGATCATGACGGCTTTCAGTGCGG
CTATTGCACGCCGGGCCAGATCTGCTCCGCAATCGGCATGGCGGCCGAGCTGAAGCGCGGCCTGCCGAGCCACGTCACGC
AGGACCTCGGCAGCGAACACATGGCGTTCAGCCACGACGAAGTCCGCGAGCGGATGAGCGGCAATCTGTGCCGCTGCGGC
GCGCACAACGGCATCATCGATGCGATCAGCGAAACCTATGCGGAGGCTGCGGAATGA

Upstream 100 bases:

>100_bases
ATAAGCCGCTTCGCGGTTAGCGCTTTCTCCGTCCCGTGCAGCGATGCGGCGGATGCCGCCGGCTGCGCCTTTGTATCAAA
ACATCCTCGAAGGAGACCAC

Downstream 100 bases:

>100_bases
CTCCTTTCGATTATTCCCGGGCCGGCGATGTCGCCGAAGCGCTGCGGGCCGGCGCCGGCGTGCAGACCAAGTTTCTCGGC
GGCGGCACCAATCTGATCGA

Product: (2Fe-2S)-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTADRSAASAGSIRINGVDCPVPSDPRVSLLDLLRETLHLHGTKKGCNQGACGACTVLVDGERIVSCLTLAVQYAGRGVT
TIEGLADDHGLHRLQQAFIDHDGFQCGYCTPGQICSAIGMAAELKRGLPSHVTQDLGSEHMAFSHDEVRERMSGNLCRCG
AHNGIIDAISETYAEAAE

Sequences:

>Translated_178_residues
MTADRSAASAGSIRINGVDCPVPSDPRVSLLDLLRETLHLHGTKKGCNQGACGACTVLVDGERIVSCLTLAVQYAGRGVT
TIEGLADDHGLHRLQQAFIDHDGFQCGYCTPGQICSAIGMAAELKRGLPSHVTQDLGSEHMAFSHDEVRERMSGNLCRCG
AHNGIIDAISETYAEAAE
>Mature_177_residues
TADRSAASAGSIRINGVDCPVPSDPRVSLLDLLRETLHLHGTKKGCNQGACGACTVLVDGERIVSCLTLAVQYAGRGVTT
IEGLADDHGLHRLQQAFIDHDGFQCGYCTPGQICSAIGMAAELKRGLPSHVTQDLGSEHMAFSHDEVRERMSGNLCRCGA
HNGIIDAISETYAEAAE

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786480, Length=164, Percent_Identity=56.0975609756098, Blast_Score=188, Evalue=2e-49,
Organism=Escherichia coli, GI1789232, Length=155, Percent_Identity=39.3548387096774, Blast_Score=99, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17540638, Length=154, Percent_Identity=35.7142857142857, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17539860, Length=166, Percent_Identity=28.3132530120482, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI32566215, Length=174, Percent_Identity=27.0114942528736, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24647193, Length=176, Percent_Identity=34.0909090909091, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24647199, Length=149, Percent_Identity=34.2281879194631, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI17737937, Length=167, Percent_Identity=35.9281437125749, Blast_Score=80, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24647197, Length=155, Percent_Identity=32.9032258064516, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24647195, Length=155, Percent_Identity=32.9032258064516, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24647201, Length=160, Percent_Identity=32.5, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 18834; Mature: 18703

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADRSAASAGSIRINGVDCPVPSDPRVSLLDLLRETLHLHGTKKGCNQGACGACTVLVD
CCCCCCCCCCCCEEECCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEC
GERIVSCLTLAVQYAGRGVTTIEGLADDHGLHRLQQAFIDHDGFQCGYCTPGQICSAIGM
HHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
AAELKRGLPSHVTQDLGSEHMAFSHDEVRERMSGNLCRCGAHNGIIDAISETYAEAAE
HHHHHCCCHHHHHHHCCCHHHCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TADRSAASAGSIRINGVDCPVPSDPRVSLLDLLRETLHLHGTKKGCNQGACGACTVLVD
CCCCCCCCCCCEEECCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEC
GERIVSCLTLAVQYAGRGVTTIEGLADDHGLHRLQQAFIDHDGFQCGYCTPGQICSAIGM
HHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
AAELKRGLPSHVTQDLGSEHMAFSHDEVRERMSGNLCRCGAHNGIIDAISETYAEAAE
HHHHHCCCHHHHHHHCCCHHHCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]