| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is ilvX [H]
Identifier: 86751038
GI number: 86751038
Start: 4483569
End: 4485113
Strand: Reverse
Name: ilvX [H]
Synonym: RPB_3930
Alternate gene names: 86751038
Gene position: 4485113-4483569 (Counterclockwise)
Preceding gene: 86751041
Following gene: 86751037
Centisome position: 84.12
GC content: 70.03
Gene sequence:
>1545_bases ATGAACGGTGCCGAAAGTCTGGTGCGGACGCTGGTCCATGGCGGCGTGGACGTCTGCTTCACCAATCCCGGCACCTCGGA AATGCACTTCGTCGCCGCGCTCGACCGCGTCGAGGGCATGCGCTGCGTGCTCGGCCTGTTCGAGGGCGTGGTCACCGGCG CCGCCGACGGTTATTTCCGGATGAAAGGCACGCCGGCCTCGACGCTGCTGCATCTCGGCCCCGGCCTCGCCAACGGCCTC GCCAATCTGCACAACGCCAAGAAGGCGAGTTCCGGCATCGTCAACATCGTCGGCCAGCACGCCACCTACCACATCGACTA CAACGCGCCGCTGACCTCCGACATCGAGGGCCTGGCGCGGCCGATGTCGGCCTGGGTCCGCACCTCGCCGGACGCGCAAT CGGTGGCGCGCGACGGCGCCGCCGCGATTGCCGCCGCGAAGAGCGCGCCGCCGCAGATCGCCACCCTGATCCTGCCCGCC GACACCGCCTGGGGCGAGGCCGACGGCATCGCCGAGGTGCCGCAAGACACCCAGCGCCCGAGCTATTCGCCGCACGCGGT GGAAGCCGCGGCGCGCGTGCTGCGCTCCGGCGAGCCGACGCTGCTGCTGCTGACCGGCGGCGCGCTCACCGAACACGGCC TCGAGCTCGCCGCGCGGATCGCCGGCAAGACCGGCTGCCGTGTGATGGGCCAGACCTACAATCCGCGGATGGCGCGCGGT CGCGGCCGCTATGCGATCGAGCGGATTCCCTATGTGATCGAAGCCGCGCTGCCGATCCTGAAGGACTTCCGCCACATCGT GCTGGTCGAGGCCAACGATCCGGTGGCGTTCTTCGCCTATCCGAACAAGCCGAGCCTGCTGAAACCGGACGGCTGCGAGG TACATCGCATGACCGAGGGCGGCGAGAATTCCACCGCAGCGCTCGAAGCGCTGGCCGGCGCGCTCGGCGCCAAGGCGGCC GACGCCCAGCCGCAGACCCATGTCGAGATCGCGCGGCCGAGCGGCGCGCTGACCCATGCCTCGATCGCCCAGGCGATCGC GATGGCGATCCCGGACAACGCCATCGTGATCGACGAATCGATCACTACCGGCCGCGGCTTCTTTCCGCCGACGGCGGCGG CGGCGCCGCACGACTGGCTGCAGAACATGGGCGGCTCGATCGGGTTCTCGCCGCCGGTCGCGGTCGGCGCCGCGGTGGCG TGCCCGGATCGCAAGGTGATCTGCCTGGTCGGCGACGGCAGCGCGATGTACACGCTGCAGGCGCTGTGGACCCAGGCTCG CGAAAATCTCGACGTCACCACCGTGGTGTTCGCCAACCGCAAATATCAGATCCTGCGCGGCGAGTTCGACGGCGTCGGCG CCGGCGAGCCGGGCCAGCGCGCGCAGGACATGCTGTCGCTGGATCGGCCGAACCTCGACTGGGTGTCGCTGGCCCGGGGC ATGGGCGTGCCGGCCCGCGCCGTGACCAGCGCCGATGAACTCAACAAGGCGCTCGACGCCGGCGTCGCCGGCAGCGGTCC GAATTTGATCGAAGTGCAGATGTAG
Upstream 100 bases:
>100_bases TGTCGCCTCGCGCAATTCTGATCCGCGCTGTGGCCCTTTGACGAAACCCCGGAACAATGATTGATCGGTCGAATAATCGT CACAACCGGGGAGAGACGCG
Downstream 100 bases:
>100_bases CCGGCGCGCCGGGCCGGCGGACGAAGCGGTTGTCGGACGCCCCGGCTCCGGCGTAGCCTGAGGGCCGGCGGCGCGGTTGC CGCCGGTGGAGCAGAGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: ALS; Acetohydroxy-acid synthase large subunit; AHAS [H]
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MNGAESLVRTLVHGGVDVCFTNPGTSEMHFVAALDRVEGMRCVLGLFEGVVTGAADGYFRMKGTPASTLLHLGPGLANGL ANLHNAKKASSGIVNIVGQHATYHIDYNAPLTSDIEGLARPMSAWVRTSPDAQSVARDGAAAIAAAKSAPPQIATLILPA DTAWGEADGIAEVPQDTQRPSYSPHAVEAAARVLRSGEPTLLLLTGGALTEHGLELAARIAGKTGCRVMGQTYNPRMARG RGRYAIERIPYVIEAALPILKDFRHIVLVEANDPVAFFAYPNKPSLLKPDGCEVHRMTEGGENSTAALEALAGALGAKAA DAQPQTHVEIARPSGALTHASIAQAIAMAIPDNAIVIDESITTGRGFFPPTAAAAPHDWLQNMGGSIGFSPPVAVGAAVA CPDRKVICLVGDGSAMYTLQALWTQARENLDVTTVVFANRKYQILRGEFDGVGAGEPGQRAQDMLSLDRPNLDWVSLARG MGVPARAVTSADELNKALDAGVAGSGPNLIEVQM
Sequences:
>Translated_514_residues MNGAESLVRTLVHGGVDVCFTNPGTSEMHFVAALDRVEGMRCVLGLFEGVVTGAADGYFRMKGTPASTLLHLGPGLANGL ANLHNAKKASSGIVNIVGQHATYHIDYNAPLTSDIEGLARPMSAWVRTSPDAQSVARDGAAAIAAAKSAPPQIATLILPA DTAWGEADGIAEVPQDTQRPSYSPHAVEAAARVLRSGEPTLLLLTGGALTEHGLELAARIAGKTGCRVMGQTYNPRMARG RGRYAIERIPYVIEAALPILKDFRHIVLVEANDPVAFFAYPNKPSLLKPDGCEVHRMTEGGENSTAALEALAGALGAKAA DAQPQTHVEIARPSGALTHASIAQAIAMAIPDNAIVIDESITTGRGFFPPTAAAAPHDWLQNMGGSIGFSPPVAVGAAVA CPDRKVICLVGDGSAMYTLQALWTQARENLDVTTVVFANRKYQILRGEFDGVGAGEPGQRAQDMLSLDRPNLDWVSLARG MGVPARAVTSADELNKALDAGVAGSGPNLIEVQM >Mature_514_residues MNGAESLVRTLVHGGVDVCFTNPGTSEMHFVAALDRVEGMRCVLGLFEGVVTGAADGYFRMKGTPASTLLHLGPGLANGL ANLHNAKKASSGIVNIVGQHATYHIDYNAPLTSDIEGLARPMSAWVRTSPDAQSVARDGAAAIAAAKSAPPQIATLILPA DTAWGEADGIAEVPQDTQRPSYSPHAVEAAARVLRSGEPTLLLLTGGALTEHGLELAARIAGKTGCRVMGQTYNPRMARG RGRYAIERIPYVIEAALPILKDFRHIVLVEANDPVAFFAYPNKPSLLKPDGCEVHRMTEGGENSTAALEALAGALGAKAA DAQPQTHVEIARPSGALTHASIAQAIAMAIPDNAIVIDESITTGRGFFPPTAAAAPHDWLQNMGGSIGFSPPVAVGAAVA CPDRKVICLVGDGSAMYTLQALWTQARENLDVTTVVFANRKYQILRGEFDGVGAGEPGQRAQDMLSLDRPNLDWVSLARG MGVPARAVTSADELNKALDAGVAGSGPNLIEVQM
Specific function: Catalyzes the conversion of 2 pyruvate molecules into acetolactate in the first common step of the biosynthetic pathway of the branched-amino acids such as leucine, isoleucine, and valine [H]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1790104, Length=554, Percent_Identity=25.4512635379061, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI87081685, Length=220, Percent_Identity=29.5454545454545, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012001 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 53704; Mature: 53704
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGAESLVRTLVHGGVDVCFTNPGTSEMHFVAALDRVEGMRCVLGLFEGVVTGAADGYFR CCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE MKGTPASTLLHLGPGLANGLANLHNAKKASSGIVNIVGQHATYHIDYNAPLTSDIEGLAR ECCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCCHHHHHHHH PMSAWVRTSPDAQSVARDGAAAIAAAKSAPPQIATLILPADTAWGEADGIAEVPQDTQRP HHHHHHCCCCCHHHHHHCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC SYSPHAVEAAARVLRSGEPTLLLLTGGALTEHGLELAARIAGKTGCRVMGQTYNPRMARG CCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHCC RGRYAIERIPYVIEAALPILKDFRHIVLVEANDPVAFFAYPNKPSLLKPDGCEVHRMTEG CCCCHHHHCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCC GENSTAALEALAGALGAKAADAQPQTHVEIARPSGALTHASIAQAIAMAIPDNAIVIDES CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECC ITTGRGFFPPTAAAAPHDWLQNMGGSIGFSPPVAVGAAVACPDRKVICLVGDGSAMYTLQ CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHCEEEECCCCEEEEEEECCCHHHHHH ALWTQARENLDVTTVVFANRKYQILRGEFDGVGAGEPGQRAQDMLSLDRPNLDWVSLARG HHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHC MGVPARAVTSADELNKALDAGVAGSGPNLIEVQM CCCCHHHHCCHHHHHHHHHCCCCCCCCCEEEEEC >Mature Secondary Structure MNGAESLVRTLVHGGVDVCFTNPGTSEMHFVAALDRVEGMRCVLGLFEGVVTGAADGYFR CCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE MKGTPASTLLHLGPGLANGLANLHNAKKASSGIVNIVGQHATYHIDYNAPLTSDIEGLAR ECCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCCHHHHHHHH PMSAWVRTSPDAQSVARDGAAAIAAAKSAPPQIATLILPADTAWGEADGIAEVPQDTQRP HHHHHHCCCCCHHHHHHCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC SYSPHAVEAAARVLRSGEPTLLLLTGGALTEHGLELAARIAGKTGCRVMGQTYNPRMARG CCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHCC RGRYAIERIPYVIEAALPILKDFRHIVLVEANDPVAFFAYPNKPSLLKPDGCEVHRMTEG CCCCHHHHCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCC GENSTAALEALAGALGAKAADAQPQTHVEIARPSGALTHASIAQAIAMAIPDNAIVIDES CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECC ITTGRGFFPPTAAAAPHDWLQNMGGSIGFSPPVAVGAAVACPDRKVICLVGDGSAMYTLQ CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHCEEEECCCCEEEEEEECCCHHHHHH ALWTQARENLDVTTVVFANRKYQILRGEFDGVGAGEPGQRAQDMLSLDRPNLDWVSLARG HHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHC MGVPARAVTSADELNKALDAGVAGSGPNLIEVQM CCCCHHHHCCHHHHHHHHHCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]