| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751037
Identifier: 86751037
GI number: 86751037
Start: 4483038
End: 4483472
Strand: Reverse
Name: 86751037
Synonym: RPB_3929
Alternate gene names: NA
Gene position: 4483472-4483038 (Counterclockwise)
Preceding gene: 86751038
Following gene: 86751031
Centisome position: 84.09
GC content: 63.68
Gene sequence:
>435_bases ATGAAGCGATATCTGATTTTCGGCGCGCTCGGTCCGTTTGTCGGCGGGCTGCTGTTGCTGTTGGCGACCAGCTATCTGTC GGGCTACTGGGCCCACACCGATCTGATGGAGGTGAAGAAGTTCGTCGTCGTGCTGTTCAAGTCGCTGCAATACAGCTACC TGTTCGGCCTGCTGCCGGCGCTGATGATGGCGGCGATCGACGAGATCATCTGTCACATCCGCCCGATCGGCCCGCGGGTG CGGATGCTGATCGTCGGCCTGATCGGCTTCACCGCCACCGCCTTCCTGTATTCCAACCGCGGCGCCGACATGGGCTCGCT GCAGTTCGTGCTCTACGGCGTGGTCGGCCTGGTGCCGGCGATGCTGTCGTCCTGGCTGGCCGAAAGGTACTGTCCGCCGG TCGTCCCGAAGACGACGGAGGGGGCGTCGGCATAG
Upstream 100 bases:
>100_bases GTAGCCGGCGCGCCGGGCCGGCGGACGAAGCGGTTGTCGGACGCCCCGGCTCCGGCGTAGCCTGAGGGCCGGCGGCGCGG TTGCCGCCGGTGGAGCAGAG
Downstream 100 bases:
>100_bases CGCCGCAGTCGTCCGGCGCTGATCGACTCAGAGCCGGCGCTTTCGATTCTGGATGAGGTGTCGTCTCGACGCGAACCGGT CTCGGCTTCGCGCGAGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MKRYLIFGALGPFVGGLLLLLATSYLSGYWAHTDLMEVKKFVVVLFKSLQYSYLFGLLPALMMAAIDEIICHIRPIGPRV RMLIVGLIGFTATAFLYSNRGADMGSLQFVLYGVVGLVPAMLSSWLAERYCPPVVPKTTEGASA
Sequences:
>Translated_144_residues MKRYLIFGALGPFVGGLLLLLATSYLSGYWAHTDLMEVKKFVVVLFKSLQYSYLFGLLPALMMAAIDEIICHIRPIGPRV RMLIVGLIGFTATAFLYSNRGADMGSLQFVLYGVVGLVPAMLSSWLAERYCPPVVPKTTEGASA >Mature_144_residues MKRYLIFGALGPFVGGLLLLLATSYLSGYWAHTDLMEVKKFVVVLFKSLQYSYLFGLLPALMMAAIDEIICHIRPIGPRV RMLIVGLIGFTATAFLYSNRGADMGSLQFVLYGVVGLVPAMLSSWLAERYCPPVVPKTTEGASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15769; Mature: 15769
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYLIFGALGPFVGGLLLLLATSYLSGYWAHTDLMEVKKFVVVLFKSLQYSYLFGLLPA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMMAAIDEIICHIRPIGPRVRMLIVGLIGFTATAFLYSNRGADMGSLQFVLYGVVGLVPA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH MLSSWLAERYCPPVVPKTTEGASA HHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKRYLIFGALGPFVGGLLLLLATSYLSGYWAHTDLMEVKKFVVVLFKSLQYSYLFGLLPA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMMAAIDEIICHIRPIGPRVRMLIVGLIGFTATAFLYSNRGADMGSLQFVLYGVVGLVPA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH MLSSWLAERYCPPVVPKTTEGASA HHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA