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The map label for this gene is 86751000

Identifier: 86751000

GI number: 86751000

Start: 4447347

End: 4448492

Strand: Reverse

Name: 86751000

Synonym: RPB_3892

Alternate gene names: NA

Gene position: 4448492-4447347 (Counterclockwise)

Preceding gene: 86751001

Following gene: 86750999

Centisome position: 83.44

GC content: 64.83

Gene sequence:

>1146_bases
ATGAACAAACTCAAGGCGCTCCTGGCCGCGGCCGTGCTCGCGTCGACCGCCGGCGCCGCATCGGCGCAGGTCAAGGTCGG
CGTGATCGCGTCGTCGACCGGTCCGATCTCGGTGGTCGGGCTGCAGCAGAAGAACACCGTGGCGCTGTTGCCGAAGACCA
TCGGCAATCTCACGGTCGACTACATCTACATGGACGACAACAGCGATCCCACCCAGGCGACCAAGAACGTCCAGAAATTC
CTGATCGAGGACAAGGTCGACGCCATCATCGGCCCGTCCGGATCGCCGAACGCGATGGCCGTGCTGTCCTTCATCGCCGA
CGCCAAGACGGTGATGCTGGCGCCGGTCGGCACCACCGCGGTGGTGCTGCCGATGGACGAGAAAAAGAAGTGGGTGTTCA
AGACCACCCAGAACGACAATCTCGTGATGGACGCGCTGGTCGCGCACATGAAGACCAACGGCGTCAAGACGGTCGCCTTC
ATCGGCACCAACGATCCGCTCGGCGCCAATTTCGCCAAGGCCTTCAAGGCCGTGATCGACAAGGAAGGCATCAAGCTGGT
CGCCGAAGAAACCTTCAGCCGCGCCGATACGTCGGTGGCCGGCCAGAGCCTGAAGATTCTGTCGGCCGCGCCGGACGCGG
TGCTGGTCGGCGCGGCGGGCGCCACCACCGTGCTGCCCGAAGTGACGCTGGTCGATCAGGGCTACAAGGGCAAGATCTAC
CAGACCCACGGCGCCGCGACGCCGGAATTCATCAAGCTGGGCGGCAAGAAGGTCGAGGGCACCATTCTCGCCGCGAGCCC
GATGCTGGTGCAGGCGCAGATCGGCGACGATGTGCCGTCGAAGGCCTCGGGACAAGCCTATATCGACGCCTACACCAAGG
TGTACGGCGTAGCGCCCGGCACCTTCGGCGCCAATGTCTGGGACGCCGGCCTGCTGCTGGAACGCACCATTCCGATCGCG
GCCGCCAAGGCCAAGCCCGGCACGCCGGAATTCCGCGCCGAGCTGCGCGACGCGCTGGAGAACGTCAAGAATCTCACCGG
CGCGCAGGGCGTCTACAACATGACTGCGGCCGATCATTCCGGCTTCGACGCCCGCAGCATCGTCACCATCGCGGTGAAGG
ACGGCGCCTGGAAGCTGCTGAAGTAA

Upstream 100 bases:

>100_bases
AAAAACTCCGCCCGCTGCAGATGCCCGCGCCTGATCCCAGCGGCCGCAGCCGCGACGCTCCGGCCGCGGCCCCGCAACGA
CGGATGGGAAGAGGGTTATC

Downstream 100 bases:

>100_bases
CAACGCGCCGCCGGCCGCGATCCGTCGCCGCGGGCGACGCGATCCGCGGCCGGCCCGCACACCGTTCGAACCCCGTTCCG
ACCATCCGCACGGCAGACGA

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MNKLKALLAAAVLASTAGAASAQVKVGVIASSTGPISVVGLQQKNTVALLPKTIGNLTVDYIYMDDNSDPTQATKNVQKF
LIEDKVDAIIGPSGSPNAMAVLSFIADAKTVMLAPVGTTAVVLPMDEKKKWVFKTTQNDNLVMDALVAHMKTNGVKTVAF
IGTNDPLGANFAKAFKAVIDKEGIKLVAEETFSRADTSVAGQSLKILSAAPDAVLVGAAGATTVLPEVTLVDQGYKGKIY
QTHGAATPEFIKLGGKKVEGTILAASPMLVQAQIGDDVPSKASGQAYIDAYTKVYGVAPGTFGANVWDAGLLLERTIPIA
AAKAKPGTPEFRAELRDALENVKNLTGAQGVYNMTAADHSGFDARSIVTIAVKDGAWKLLK

Sequences:

>Translated_381_residues
MNKLKALLAAAVLASTAGAASAQVKVGVIASSTGPISVVGLQQKNTVALLPKTIGNLTVDYIYMDDNSDPTQATKNVQKF
LIEDKVDAIIGPSGSPNAMAVLSFIADAKTVMLAPVGTTAVVLPMDEKKKWVFKTTQNDNLVMDALVAHMKTNGVKTVAF
IGTNDPLGANFAKAFKAVIDKEGIKLVAEETFSRADTSVAGQSLKILSAAPDAVLVGAAGATTVLPEVTLVDQGYKGKIY
QTHGAATPEFIKLGGKKVEGTILAASPMLVQAQIGDDVPSKASGQAYIDAYTKVYGVAPGTFGANVWDAGLLLERTIPIA
AAKAKPGTPEFRAELRDALENVKNLTGAQGVYNMTAADHSGFDARSIVTIAVKDGAWKLLK
>Mature_381_residues
MNKLKALLAAAVLASTAGAASAQVKVGVIASSTGPISVVGLQQKNTVALLPKTIGNLTVDYIYMDDNSDPTQATKNVQKF
LIEDKVDAIIGPSGSPNAMAVLSFIADAKTVMLAPVGTTAVVLPMDEKKKWVFKTTQNDNLVMDALVAHMKTNGVKTVAF
IGTNDPLGANFAKAFKAVIDKEGIKLVAEETFSRADTSVAGQSLKILSAAPDAVLVGAAGATTVLPEVTLVDQGYKGKIY
QTHGAATPEFIKLGGKKVEGTILAASPMLVQAQIGDDVPSKASGQAYIDAYTKVYGVAPGTFGANVWDAGLLLERTIPIA
AAKAKPGTPEFRAELRDALENVKNLTGAQGVYNMTAADHSGFDARSIVTIAVKDGAWKLLK

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 39642; Mature: 39642

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLKALLAAAVLASTAGAASAQVKVGVIASSTGPISVVGLQQKNTVALLPKTIGNLTVD
CCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEEECCCCEEEECCCCCCCEEEE
YIYMDDNSDPTQATKNVQKFLIEDKVDAIIGPSGSPNAMAVLSFIADAKTVMLAPVGTTA
EEEECCCCCHHHHHHHHHHHHHHHCHHEEECCCCCCCHHHHHHHHHCCCEEEEEECCCEE
VVLPMDEKKKWVFKTTQNDNLVMDALVAHMKTNGVKTVAFIGTNDPLGANFAKAFKAVID
EEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHC
KEGIKLVAEETFSRADTSVAGQSLKILSAAPDAVLVGAAGATTVLPEVTLVDQGYKGKIY
CCCCEEEEHHHHHHCCHHHCCCCEEEEECCCCEEEEECCCCCHHCCCEEEECCCCCCCEE
QTHGAATPEFIKLGGKKVEGTILAASPMLVQAQIGDDVPSKASGQAYIDAYTKVYGVAPG
EECCCCCHHHHHCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEEHHHEECCCC
TFGANVWDAGLLLERTIPIAAAKAKPGTPEFRAELRDALENVKNLTGAQGVYNMTAADHS
CCCCCHHCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
GFDARSIVTIAVKDGAWKLLK
CCCCCEEEEEEEECCCEECCC
>Mature Secondary Structure
MNKLKALLAAAVLASTAGAASAQVKVGVIASSTGPISVVGLQQKNTVALLPKTIGNLTVD
CCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEEECCCCEEEECCCCCCCEEEE
YIYMDDNSDPTQATKNVQKFLIEDKVDAIIGPSGSPNAMAVLSFIADAKTVMLAPVGTTA
EEEECCCCCHHHHHHHHHHHHHHHCHHEEECCCCCCCHHHHHHHHHCCCEEEEEECCCEE
VVLPMDEKKKWVFKTTQNDNLVMDALVAHMKTNGVKTVAFIGTNDPLGANFAKAFKAVID
EEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHC
KEGIKLVAEETFSRADTSVAGQSLKILSAAPDAVLVGAAGATTVLPEVTLVDQGYKGKIY
CCCCEEEEHHHHHHCCHHHCCCCEEEEECCCCEEEEECCCCCHHCCCEEEECCCCCCCEE
QTHGAATPEFIKLGGKKVEGTILAASPMLVQAQIGDDVPSKASGQAYIDAYTKVYGVAPG
EECCCCCHHHHHCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEEHHHEECCCC
TFGANVWDAGLLLERTIPIAAAKAKPGTPEFRAELRDALENVKNLTGAQGVYNMTAADHS
CCCCCHHCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
GFDARSIVTIAVKDGAWKLLK
CCCCCEEEEEEEECCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]