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The map label for this gene is 86750863

Identifier: 86750863

GI number: 86750863

Start: 4289225

End: 4290661

Strand: Reverse

Name: 86750863

Synonym: RPB_3754

Alternate gene names: NA

Gene position: 4290661-4289225 (Counterclockwise)

Preceding gene: 86750865

Following gene: 86750861

Centisome position: 80.48

GC content: 69.03

Gene sequence:

>1437_bases
ATGTTGCGTGCGATGCTGTGGAACGCGGCGGTAGCTGCAACGATGATGCTGGGGGCGGAGGCTGCGCTGGCGGAAAGCCG
CGTCGCCCTGGTGGTCGGCCAGTCGGCCTACCGCGCCGTGCCGGCGCTGCCCAATCCGGTCAATGACGCCAAGGCGATCG
AGAAGCTGCTCGGCGATGCCGGCTTCGAGGTCACGGCCGCGAACGATCTGACCCAGACCGAGTTGCGCCAGATGGTCGGC
GATTTCGCCGCCAAAGTCGCAGCCAAGGGGCCGGACACCGTCGCGCTGATGTTCTACGCGGGCCACGGCATCCAGGTCGA
CGGCGAGAACTATCTCATCCCCATCGACGTCGATCCCAAGCGCGAGGCTGATATTCCGCTGCAGGCGGTGCGGCTCAACG
ACGTGCTCAACACCCTGACCTCGGTGCCGACCCGCAGCCGCATCATCATGCTCGATGCCTGCCGCAACAATCCGTTCCCC
GAGATCCGGAAGACCACCGGGCAGGGGCTGGCGCTGGTCGACGCCAAGACCGGCGCGCCGGGCACCTTCCTGTCGTTCTC
GACTGCGCCGGGCACCGAGGCCGAAGACGGCGGCGGCGCCAACAGCCCCTATACCGCGGCGCTGCTCAAGGCGGGCCGCG
AGAGCGGGCTGCAGATCGAGGATACGTTCAAGCGGGTGCGGCTGGCGGTCAATCAGGCCACCTCCGGCCGGCAGACGCCG
TGGGAGAGCTCTTCGCTGTTGGATGATTTCCGCTTCTTCGGCAGTGCCGAGGACGGCCTCAAGCCGGAGAAGAAGCGCAG
CGTCGAGGAATGGAAGGCCTTCCTCAAGGGCAAGCCGATCGAGCAGGCCAACGAGTTGATCGTCTCAGACGGCTCCGGCG
ACGCCTATGAGGCGTTCGTGTCGCTGTATGCCGAGCCGCCGCTCGGTCCCGAGGCGAAGCGCTGGCTCGACCGCTTTCGC
CAGATGCAGGCCTGGAACCGGGCGGTGCTCGCCAACAGCGGGCCGGCCTACCGGTCCTTCCTCGACCAGTATCCCGACAG
CGACCTGACCCCGACCGCGAAGAAACTGGAAGAACGCCAGCGCAACAAGCCGGTGCCCGCGGTGGCGATCCCGGCTGCGA
CGCAAGCCAGCCTGACCCCGGTGGCGCCTGCGTCCGCGGCGACCTGTCCGTGCAGCACGCCGCCCGCGATCCAGAAGAAG
GTCGACAAGCCCAAGCGCGTCGAGCGCGCGGAGCCGCCGAAACGGACCGCCCAGCCGCCGCGCGGCCGAGTCTACTATGA
GGATGACGACGTCGTCGTGGTGCGCCGCCCGCCGGTCTATTACGACCCGCCGCGCGGCCCGAGCATTTCGATCGGCGGTG
GCATCCGGGGCGGCGGCTATGGCGGCGGCCCGAGCCGAGGCGGCGACGGCGGCCGCGTCGGCGGCAGCCGCTACTGA

Upstream 100 bases:

>100_bases
GGTCCGGGGCGCGGCGTCCAATTGCCACGGGCTTGCGGTGAACCCGGTCGCTGCGGCGGCCGACCAACTGCGGGAAATTG
CTTTGGAACAGGAGAGGTCG

Downstream 100 bases:

>100_bases
CCGTCCGTGGCGCATCGAGGGCGCGTGCGTGCCCAGCGGGGCGCAGGCGGCGATCGGAGGGGCGGGTGCGGGAAGCCGTT
CTACTGAAAGGCGACGCCGA

Product: peptidase C14, caspase catalytic subunit p20

Products: NA

Alternate protein names: Caspase Domain Protein; Caspase-Like Domain- And TPR Repeat-Containing Peptidase; Peptidase C; Caspase-Like Domain-Containing Protein; Peptidase Protein; Caspase Domain-Containing Protein; TPR Repeat-Containing Caspace; GUN4-Like Family; Caspase; Peptidylprolyl Isomerase; Caspase-1 P; ICE-Like Protease

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MLRAMLWNAAVAATMMLGAEAALAESRVALVVGQSAYRAVPALPNPVNDAKAIEKLLGDAGFEVTAANDLTQTELRQMVG
DFAAKVAAKGPDTVALMFYAGHGIQVDGENYLIPIDVDPKREADIPLQAVRLNDVLNTLTSVPTRSRIIMLDACRNNPFP
EIRKTTGQGLALVDAKTGAPGTFLSFSTAPGTEAEDGGGANSPYTAALLKAGRESGLQIEDTFKRVRLAVNQATSGRQTP
WESSSLLDDFRFFGSAEDGLKPEKKRSVEEWKAFLKGKPIEQANELIVSDGSGDAYEAFVSLYAEPPLGPEAKRWLDRFR
QMQAWNRAVLANSGPAYRSFLDQYPDSDLTPTAKKLEERQRNKPVPAVAIPAATQASLTPVAPASAATCPCSTPPAIQKK
VDKPKRVERAEPPKRTAQPPRGRVYYEDDDVVVVRRPPVYYDPPRGPSISIGGGIRGGGYGGGPSRGGDGGRVGGSRY

Sequences:

>Translated_478_residues
MLRAMLWNAAVAATMMLGAEAALAESRVALVVGQSAYRAVPALPNPVNDAKAIEKLLGDAGFEVTAANDLTQTELRQMVG
DFAAKVAAKGPDTVALMFYAGHGIQVDGENYLIPIDVDPKREADIPLQAVRLNDVLNTLTSVPTRSRIIMLDACRNNPFP
EIRKTTGQGLALVDAKTGAPGTFLSFSTAPGTEAEDGGGANSPYTAALLKAGRESGLQIEDTFKRVRLAVNQATSGRQTP
WESSSLLDDFRFFGSAEDGLKPEKKRSVEEWKAFLKGKPIEQANELIVSDGSGDAYEAFVSLYAEPPLGPEAKRWLDRFR
QMQAWNRAVLANSGPAYRSFLDQYPDSDLTPTAKKLEERQRNKPVPAVAIPAATQASLTPVAPASAATCPCSTPPAIQKK
VDKPKRVERAEPPKRTAQPPRGRVYYEDDDVVVVRRPPVYYDPPRGPSISIGGGIRGGGYGGGPSRGGDGGRVGGSRY
>Mature_478_residues
MLRAMLWNAAVAATMMLGAEAALAESRVALVVGQSAYRAVPALPNPVNDAKAIEKLLGDAGFEVTAANDLTQTELRQMVG
DFAAKVAAKGPDTVALMFYAGHGIQVDGENYLIPIDVDPKREADIPLQAVRLNDVLNTLTSVPTRSRIIMLDACRNNPFP
EIRKTTGQGLALVDAKTGAPGTFLSFSTAPGTEAEDGGGANSPYTAALLKAGRESGLQIEDTFKRVRLAVNQATSGRQTP
WESSSLLDDFRFFGSAEDGLKPEKKRSVEEWKAFLKGKPIEQANELIVSDGSGDAYEAFVSLYAEPPLGPEAKRWLDRFR
QMQAWNRAVLANSGPAYRSFLDQYPDSDLTPTAKKLEERQRNKPVPAVAIPAATQASLTPVAPASAATCPCSTPPAIQKK
VDKPKRVERAEPPKRTAQPPRGRVYYEDDDVVVVRRPPVYYDPPRGPSISIGGGIRGGGYGGGPSRGGDGGRVGGSRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI5803078, Length=190, Percent_Identity=27.8947368421053, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI27886566, Length=190, Percent_Identity=27.8947368421053, Blast_Score=80, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51192; Mature: 51192

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS50208 CASPASE_P20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRAMLWNAAVAATMMLGAEAALAESRVALVVGQSAYRAVPALPNPVNDAKAIEKLLGDA
CCHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHCCCCCCCCCHHHHHHHHHCCC
GFEVTAANDLTQTELRQMVGDFAAKVAAKGPDTVALMFYAGHGIQVDGENYLIPIDVDPK
CCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEECCCCEEEEECCCCC
READIPLQAVRLNDVLNTLTSVPTRSRIIMLDACRNNPFPEIRKTTGQGLALVDAKTGAP
CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHCCCCCEEEEECCCCCC
GTFLSFSTAPGTEAEDGGGANSPYTAALLKAGRESGLQIEDTFKRVRLAVNQATSGRQTP
CCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
WESSSLLDDFRFFGSAEDGLKPEKKRSVEEWKAFLKGKPIEQANELIVSDGSGDAYEAFV
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHH
SLYAEPPLGPEAKRWLDRFRQMQAWNRAVLANSGPAYRSFLDQYPDSDLTPTAKKLEERQ
HHHCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
RNKPVPAVAIPAATQASLTPVAPASAATCPCSTPPAIQKKVDKPKRVERAEPPKRTAQPP
HCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCC
RGRVYYEDDDVVVVRRPPVYYDPPRGPSISIGGGIRGGGYGGGPSRGGDGGRVGGSRY
CCEEEECCCCEEEEECCCCEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRAMLWNAAVAATMMLGAEAALAESRVALVVGQSAYRAVPALPNPVNDAKAIEKLLGDA
CCHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHCCCCCCCCCHHHHHHHHHCCC
GFEVTAANDLTQTELRQMVGDFAAKVAAKGPDTVALMFYAGHGIQVDGENYLIPIDVDPK
CCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEECCCCEEEEECCCCC
READIPLQAVRLNDVLNTLTSVPTRSRIIMLDACRNNPFPEIRKTTGQGLALVDAKTGAP
CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHCCCCCEEEEECCCCCC
GTFLSFSTAPGTEAEDGGGANSPYTAALLKAGRESGLQIEDTFKRVRLAVNQATSGRQTP
CCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
WESSSLLDDFRFFGSAEDGLKPEKKRSVEEWKAFLKGKPIEQANELIVSDGSGDAYEAFV
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHH
SLYAEPPLGPEAKRWLDRFRQMQAWNRAVLANSGPAYRSFLDQYPDSDLTPTAKKLEERQ
HHHCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
RNKPVPAVAIPAATQASLTPVAPASAATCPCSTPPAIQKKVDKPKRVERAEPPKRTAQPP
HCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCC
RGRVYYEDDDVVVVRRPPVYYDPPRGPSISIGGGIRGGGYGGGPSRGGDGGRVGGSRY
CCEEEECCCCEEEEECCCCEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA