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The map label for this gene is recA [H]

Identifier: 86750850

GI number: 86750850

Start: 4281654

End: 4282748

Strand: Reverse

Name: recA [H]

Synonym: RPB_3741

Alternate gene names: 86750850

Gene position: 4282748-4281654 (Counterclockwise)

Preceding gene: 86750853

Following gene: 86750846

Centisome position: 80.33

GC content: 64.47

Gene sequence:

>1095_bases
ATGGCTGCTGCCCCCACTGCTTTGCGTATCGTCGAAGGATCCTCCATGGACAAGACCAAGGCCCTGGCCGCTGCGCTGTC
TCAGATCGAGCGCCAGTTCGGCAAGGGCTCGGTGATGAAGCTCGGCAAGAACGACCGGTCGATGGATATCGAGACGATTT
CCTCCGGGTCGCTCGGGCTGGATATCGCGCTCGGTGTCGGCGGCCTGCCGAAGGGGCGGGTGGTCGAGATCTACGGGCCG
GAATCCTCGGGCAAGACCACGCTGGCGCTGCATTGCGCCGCCGAGGCCCAGAAGAAGGGCGGCATCTGCGCCTTCATCGA
CGCCGAACACGCGCTCGACCCGGTCTACGCCCGCAAGCTCGGCGTCAATGTCGATGAACTTCTGATCTCGCAGCCGGATC
ATGGCGAGCAGGCGCTGGAAATCGCCGACACGCTGGTGCGCTCCGGCGCGATCGACGTGCTGATCGTCGATTCGGTCGCG
GCGCTCGTGCCGCGCGCCGAACTCGAGGGCGACATGGGCGATGCGCTGCCCGGCCTGCAGGCGCGGCTGATGAGCCAGGC
GCTGCGCAAGCTGACCGCCTCGATCAACAAGTCCCACACCATGGTGATCTTCATCAACCAGATCCGGATGAAGATCGGCG
TGATGTATGGTTCGCCCGAAACCACCACCGGCGGCAACGCGCTGAAATTCTACGCCTCGGTCCGGCTCGACATCCGCCGC
ATCGGCCAGATCAAGGAGCGCGACGAAGTCGTCGGCAACCAGACCCGCGTCAAGGTGGTGAAGAACAAGCTGGCGCCGCC
GTTCAAGCAGGTCGAATTCGACATCATGTACGGCGAGGGCGTTTCCAAGATGGGCGAGATTCTCGATCTCGGCGTCAAGG
CCGGCATCGTCGAGAAGTCCGGCGCCTGGTTCTCCTATGACAGCCAGCGTCTCGGCCAGGGCCGCGAGAATTCCAAGGCG
TTCCTGCGCGCCAATCCGGACATGACCGCCAAGATCGAAGCCTCGATCCGCCAGAACTCCGGCCTGATCGCCGAACAGAT
TCTGGCGGGTTCGCCCGAGAGCGACGCCGACGGCGAGGAGCCCGGCGACGAGTAA

Upstream 100 bases:

>100_bases
CATATTGCGAACGGAGAACAAAAAGTGTACATAGATTTGGCCGGTCATTGGGCCGGCGCGGTTTGTCCCATCGGCGAATC
CCGTTCATAAGGAGCTTCAT

Downstream 100 bases:

>100_bases
GACGCCACTGCGGAAGTTGCCGTCCACGGCGGCTTCCCGACCCACGAGTCCAAGCCGGCGGGCGCCGCGAACCCCTGTTG
CCGGGGATCCCGTAGCGCTC

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MAAAPTALRIVEGSSMDKTKALAAALSQIERQFGKGSVMKLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRVVEIYGP
ESSGKTTLALHCAAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHGEQALEIADTLVRSGAIDVLIVDSVA
ALVPRAELEGDMGDALPGLQARLMSQALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRR
IGQIKERDEVVGNQTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGRENSKA
FLRANPDMTAKIEASIRQNSGLIAEQILAGSPESDADGEEPGDE

Sequences:

>Translated_364_residues
MAAAPTALRIVEGSSMDKTKALAAALSQIERQFGKGSVMKLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRVVEIYGP
ESSGKTTLALHCAAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHGEQALEIADTLVRSGAIDVLIVDSVA
ALVPRAELEGDMGDALPGLQARLMSQALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRR
IGQIKERDEVVGNQTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGRENSKA
FLRANPDMTAKIEASIRQNSGLIAEQILAGSPESDADGEEPGDE
>Mature_363_residues
AAAPTALRIVEGSSMDKTKALAAALSQIERQFGKGSVMKLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRVVEIYGPE
SSGKTTLALHCAAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHGEQALEIADTLVRSGAIDVLIVDSVAA
LVPRAELEGDMGDALPGLQARLMSQALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRI
GQIKERDEVVGNQTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGRENSKAF
LRANPDMTAKIEASIRQNSGLIAEQILAGSPESDADGEEPGDE

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=341, Percent_Identity=65.6891495601173, Blast_Score=472, Evalue=1e-134,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 38822; Mature: 38691

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAPTALRIVEGSSMDKTKALAAALSQIERQFGKGSVMKLGKNDRSMDIETISSGSLGL
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCE
DIALGVGGLPKGRVVEIYGPESSGKTTLALHCAAEAQKKGGICAFIDAEHALDPVYARKL
EEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEHHHHHCCCEEEEEECHHCCCHHHHHHH
GVNVDELLISQPDHGEQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGDMGDALPGLQ
CCCHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCHHHCCCCCCCCCCHHH
ARLMSQALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRR
HHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHH
IGQIKERDEVVGNQTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKS
HCCHHHHHHHHCCCHHHHHHHHHCCCCHHHEEEEEEECCCHHHHHHHHHHHHHCCEEECC
GAWFSYDSQRLGQGRENSKAFLRANPDMTAKIEASIRQNSGLIAEQILAGSPESDADGEE
CCEEECCHHHHCCCCCCCCEEEEECCCCEEEEEEEHHCCCCHHHHHHHCCCCCCCCCCCC
PGDE
CCCC
>Mature Secondary Structure 
AAAPTALRIVEGSSMDKTKALAAALSQIERQFGKGSVMKLGKNDRSMDIETISSGSLGL
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCE
DIALGVGGLPKGRVVEIYGPESSGKTTLALHCAAEAQKKGGICAFIDAEHALDPVYARKL
EEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEHHHHHCCCEEEEEECHHCCCHHHHHHH
GVNVDELLISQPDHGEQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGDMGDALPGLQ
CCCHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCHHHCCCCCCCCCCHHH
ARLMSQALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRR
HHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHH
IGQIKERDEVVGNQTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKS
HCCHHHHHHHHCCCHHHHHHHHHCCCCHHHEEEEEEECCCHHHHHHHHHHHHHCCEEECC
GAWFSYDSQRLGQGRENSKAFLRANPDMTAKIEASIRQNSGLIAEQILAGSPESDADGEE
CCEEECCHHHHCCCCCCCCEEEEECCCCEEEEEEEHHCCCCHHHHHHHCCCCCCCCCCCC
PGDE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]