| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750837
Identifier: 86750837
GI number: 86750837
Start: 4264268
End: 4264681
Strand: Reverse
Name: 86750837
Synonym: RPB_3728
Alternate gene names: NA
Gene position: 4264681-4264268 (Counterclockwise)
Preceding gene: 86750838
Following gene: 86750836
Centisome position: 79.99
GC content: 67.87
Gene sequence:
>414_bases ATGCGGACAACATCGATATCATCACGTCGCGTCGGCTCGGGGATGGTGGCCGGGCTGGCGCTGTTGGCAGTCGCCGCGAT GACGGCCACGGACGCCCGCGCCGACGACGTCGCCGGCACCTGGCTGCGCGATACCGGCCTGTCCAAGGTCAAGTTCGCGC CCTGCGGCGGTGCGGTCTGCGGCACGCTGGTCTGGTTGAAGCCGGGCGTCGAGACGCCGGCCAAGATCGGCCAGAAAGTG TTCTTCGACATGAAGCCGTCCGGGCCGAACGCCTGGGCCGGCAGCGCCTTCAATCCCGAAGACGGCAAGACCTACACCGG CAAGATGAATCTGGCCGGCGGCACCCTGACCACCCAGGGCTGCGCGATGGGCGGCATGATCTGCAAGTCCTCGACCTGGA CCCGGGCGAACTGA
Upstream 100 bases:
>100_bases GCAACAGCGCGGTTAGTCCCCGATTGACTTGCGCCCCGGCGCGCTATTGGCTTGATCGCAAGCGGCGATGCGCCGCGCGA ACAACGATCAGGGGGGGGAC
Downstream 100 bases:
>100_bases GCGCAGACCGCGGCCCTGCGGCGGGACGCAGGCCGTTTCGCGGCGCCGCGATCCTCGCCCCGGGCGCTCTGGCCCTGGTG GCGCGGCTGTGCGGGCAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MRTTSISSRRVGSGMVAGLALLAVAAMTATDARADDVAGTWLRDTGLSKVKFAPCGGAVCGTLVWLKPGVETPAKIGQKV FFDMKPSGPNAWAGSAFNPEDGKTYTGKMNLAGGTLTTQGCAMGGMICKSSTWTRAN
Sequences:
>Translated_137_residues MRTTSISSRRVGSGMVAGLALLAVAAMTATDARADDVAGTWLRDTGLSKVKFAPCGGAVCGTLVWLKPGVETPAKIGQKV FFDMKPSGPNAWAGSAFNPEDGKTYTGKMNLAGGTLTTQGCAMGGMICKSSTWTRAN >Mature_137_residues MRTTSISSRRVGSGMVAGLALLAVAAMTATDARADDVAGTWLRDTGLSKVKFAPCGGAVCGTLVWLKPGVETPAKIGQKV FFDMKPSGPNAWAGSAFNPEDGKTYTGKMNLAGGTLTTQGCAMGGMICKSSTWTRAN
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14094; Mature: 14094
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTSISSRRVGSGMVAGLALLAVAAMTATDARADDVAGTWLRDTGLSKVKFAPCGGAVC CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCEEEECCCCCHHH GTLVWLKPGVETPAKIGQKVFFDMKPSGPNAWAGSAFNPEDGKTYTGKMNLAGGTLTTQG HEEEEECCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCC CAMGGMICKSSTWTRAN CCCCCEEECCCCCCCCC >Mature Secondary Structure MRTTSISSRRVGSGMVAGLALLAVAAMTATDARADDVAGTWLRDTGLSKVKFAPCGGAVC CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCEEEECCCCCHHH GTLVWLKPGVETPAKIGQKVFFDMKPSGPNAWAGSAFNPEDGKTYTGKMNLAGGTLTTQG HEEEEECCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCC CAMGGMICKSSTWTRAN CCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA