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The map label for this gene is srpB [H]

Identifier: 86750461

GI number: 86750461

Start: 3833631

End: 3834131

Strand: Direct

Name: srpB [H]

Synonym: RPB_3350

Alternate gene names: 86750461

Gene position: 3833631-3834131 (Clockwise)

Preceding gene: 86750460

Following gene: 86750463

Centisome position: 71.9

GC content: 71.06

Gene sequence:

>501_bases
GTGCTGCCGTGGTGGGAGATGTTGTTGCGCCTCGGCGTCGCCGCGGTGGCCGGCGGACTGATCGGCCTCAATCGCGACCT
GCAGGGCAAGCCGATCGGGATGCGGACGCTGGCGCTGGTCGGCGTCGCCTCCGCGCTGCTGGTCGCCCTCGCCGACCAGA
GCGCAGATCTCGACCACGTGTCCGACCCGACCAGCCGCGTGATTCAAGGCATCCTCACCGGCATCGGCTTTCTCGGCGCC
GGCGTCATCGTCCACACCGGCGGCCGACACGACGTGCACGGCTTGACCACCGCAGCCTGCACCTGGCTGACCGCCTGCAT
CGGCATCGCCTGCGGCGCCGGACAATGGCCGGGGGTGCTGGCCGCGATGGCGATCACCCTTGCCGTGCTGATCGGCGGCC
ACCGGCTCGAGGGCCTGCTGCATCGCCTGCTCGGCGGCAAGGACTCGGAAGGCGGCGGCGACGAGACCAAGAGCAAGGGC
TCGCCGGCGGTGGAGGATTGA

Upstream 100 bases:

>100_bases
CATGGCCAATGTCACCGGCATGCGGCCGAACGACGAGTTCTATCTGATGGGCCGGCTGCCGAAATCATGACGCGGCCGAT
CGCGCTGGGAGGCTGATGCG

Downstream 100 bases:

>100_bases
TGCGCCGCCGCAGCACGGTCAATCGTCGAACGCCGGTCCGCACCAGCCCGGCAGATAGATCGCATCCCTGCTCTTGGCGA
GCGCCAGCGACAGTTCCGTC

Product: MgtC/SapB transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MLPWWEMLLRLGVAAVAGGLIGLNRDLQGKPIGMRTLALVGVASALLVALADQSADLDHVSDPTSRVIQGILTGIGFLGA
GVIVHTGGRHDVHGLTTAACTWLTACIGIACGAGQWPGVLAAMAITLAVLIGGHRLEGLLHRLLGGKDSEGGGDETKSKG
SPAVED

Sequences:

>Translated_166_residues
MLPWWEMLLRLGVAAVAGGLIGLNRDLQGKPIGMRTLALVGVASALLVALADQSADLDHVSDPTSRVIQGILTGIGFLGA
GVIVHTGGRHDVHGLTTAACTWLTACIGIACGAGQWPGVLAAMAITLAVLIGGHRLEGLLHRLLGGKDSEGGGDETKSKG
SPAVED
>Mature_166_residues
MLPWWEMLLRLGVAAVAGGLIGLNRDLQGKPIGMRTLALVGVASALLVALADQSADLDHVSDPTSRVIQGILTGIGFLGA
GVIVHTGGRHDVHGLTTAACTWLTACIGIACGAGQWPGVLAAMAITLAVLIGGHRLEGLLHRLLGGKDSEGGGDETKSKG
SPAVED

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=135, Percent_Identity=40.7407407407407, Blast_Score=83, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 16856; Mature: 16856

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPWWEMLLRLGVAAVAGGLIGLNRDLQGKPIGMRTLALVGVASALLVALADQSADLDHV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SDPTSRVIQGILTGIGFLGAGVIVHTGGRHDVHGLTTAACTWLTACIGIACGAGQWPGVL
CCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AAMAITLAVLIGGHRLEGLLHRLLGGKDSEGGGDETKSKGSPAVED
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLPWWEMLLRLGVAAVAGGLIGLNRDLQGKPIGMRTLALVGVASALLVALADQSADLDHV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SDPTSRVIQGILTGIGFLGAGVIVHTGGRHDVHGLTTAACTWLTACIGIACGAGQWPGVL
CCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AAMAITLAVLIGGHRLEGLLHRLLGGKDSEGGGDETKSKGSPAVED
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]