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The map label for this gene is 86750314

Identifier: 86750314

GI number: 86750314

Start: 3664350

End: 3665432

Strand: Direct

Name: 86750314

Synonym: RPB_3203

Alternate gene names: NA

Gene position: 3664350-3665432 (Clockwise)

Preceding gene: 86750313

Following gene: 86750321

Centisome position: 68.73

GC content: 68.61

Gene sequence:

>1083_bases
ATGACCACCCCGCTCGCCGCCAAAATCGCCCGCGACATCGGCACGCCCGCTTTGGTGATCGACATGGACCGGGTCGAGCG
CAACATCGCGCGGGTGCAGGGACTGTGCGACGCGGCCGGCGTCGCCAACCGGCCGCATATCAAGACCCACAAATCGCCGC
TACTGGCGCAGATGCAGATCAAAGCCGGCGCCCGCGGCATCACCTGCCAGAAGCTCGGCGAAGCCGAAGTGATGGCCGAG
GCCGGCATCGACGACATCCTGATCAGCTACAATCTCATCGGCGAGGAGAAGATGGCACGACTCGGCGCGCTGCACGAACG
CGCGCAGATGATCGTCGCCGCCGACAACGAGGTGGTGATCGCCGGCCTCCCCGCCGCTGCGGCGCGCGCCGGCCGCCCGC
TCGGCGTCGTGGTCGAATGCGACACCGGCCGGCAGCGCGCCGGCGTCGAGACGCCGGCGGAAGCGATCGCGCTCGCCCGC
ACGATCGCGGCCTCCGACGGGCTCGTGTTCAAGGGCTTGATGCTGTACCCGACCGAGGACGGCTGGCCGCAGGCGCAGCG
CTTCTTCGACGAGGCGCTGGCCGGCATCCGCGCGCATGGCCTCGACGCGGAAATCGTCTCGACCGGCGGCTCGCCGAATT
TGAAGAACCTCGGCCAGCTCGCAGGCGCCACCGAGCATCGTCCCGGCACCTACATCTACAACGACCGCATGCAGGTCGAA
GCCGGCGTCGCATCATGGGACGATTGCGCGCTGACGATCTATTCCACCGTGGTCAGCCGCGCTGCACCCGAGCGCGGCAT
CCTCGACGCCGGCTCGAAGACGCTGACCTCCGACCCCGGCGGCGGCCTCGACGGTTTCGGCCTCATTCTCGATCATCCCG
AAGCCCGCATCGCCCGCTTCGCCGAGGAGCACGGCTTCCTCGATCTCTCCCGCAGCAACTCCCGCCCGGCCATCGGCGAC
GTCGTGCGGATCGTACCCAACCACGTCTGCGTCGTCGTCAACATGGTCGACGAGGTGGTGATGGTCCGCGGCGACGAGAT
CGTCGGGATGCTGCCGGTCGCGGCACGCGGGAAGCTGAAGTAA

Upstream 100 bases:

>100_bases
TTCGCCGCGCCGAAGCGGCTTCGGCCGCGCAGGCGGGTCAAGCCCGGGCATGACGTGGTACTAAGTTGCCAAGCAGTATA
CAACAAGCTGGAGCCCGCCC

Downstream 100 bases:

>100_bases
CAACGTCCATGTTCGTCATTCCGGGGCGCTCGCACAGCGAGCGAACCCGGAATCCCGAGGTTCAGGGCACAACCGAGATT
CCGGGTTCGCGCTACGCGCG

Product: alanine racemase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MTTPLAAKIARDIGTPALVIDMDRVERNIARVQGLCDAAGVANRPHIKTHKSPLLAQMQIKAGARGITCQKLGEAEVMAE
AGIDDILISYNLIGEEKMARLGALHERAQMIVAADNEVVIAGLPAAAARAGRPLGVVVECDTGRQRAGVETPAEAIALAR
TIAASDGLVFKGLMLYPTEDGWPQAQRFFDEALAGIRAHGLDAEIVSTGGSPNLKNLGQLAGATEHRPGTYIYNDRMQVE
AGVASWDDCALTIYSTVVSRAAPERGILDAGSKTLTSDPGGGLDGFGLILDHPEARIARFAEEHGFLDLSRSNSRPAIGD
VVRIVPNHVCVVVNMVDEVVMVRGDEIVGMLPVAARGKLK

Sequences:

>Translated_360_residues
MTTPLAAKIARDIGTPALVIDMDRVERNIARVQGLCDAAGVANRPHIKTHKSPLLAQMQIKAGARGITCQKLGEAEVMAE
AGIDDILISYNLIGEEKMARLGALHERAQMIVAADNEVVIAGLPAAAARAGRPLGVVVECDTGRQRAGVETPAEAIALAR
TIAASDGLVFKGLMLYPTEDGWPQAQRFFDEALAGIRAHGLDAEIVSTGGSPNLKNLGQLAGATEHRPGTYIYNDRMQVE
AGVASWDDCALTIYSTVVSRAAPERGILDAGSKTLTSDPGGGLDGFGLILDHPEARIARFAEEHGFLDLSRSNSRPAIGD
VVRIVPNHVCVVVNMVDEVVMVRGDEIVGMLPVAARGKLK
>Mature_359_residues
TTPLAAKIARDIGTPALVIDMDRVERNIARVQGLCDAAGVANRPHIKTHKSPLLAQMQIKAGARGITCQKLGEAEVMAEA
GIDDILISYNLIGEEKMARLGALHERAQMIVAADNEVVIAGLPAAAARAGRPLGVVVECDTGRQRAGVETPAEAIALART
IAASDGLVFKGLMLYPTEDGWPQAQRFFDEALAGIRAHGLDAEIVSTGGSPNLKNLGQLAGATEHRPGTYIYNDRMQVEA
GVASWDDCALTIYSTVVSRAAPERGILDAGSKTLTSDPGGGLDGFGLILDHPEARIARFAEEHGFLDLSRSNSRPAIGDV
VRIVPNHVCVVVNMVDEVVMVRGDEIVGMLPVAARGKLK

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 38073; Mature: 37942

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPLAAKIARDIGTPALVIDMDRVERNIARVQGLCDAAGVANRPHIKTHKSPLLAQMQI
CCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
KAGARGITCQKLGEAEVMAEAGIDDILISYNLIGEEKMARLGALHERAQMIVAADNEVVI
CCCCCCCCHHHCCCHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHCEEEEEECCCEEE
AGLPAAAARAGRPLGVVVECDTGRQRAGVETPAEAIALARTIAASDGLVFKGLMLYPTED
EECCHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCC
GWPQAQRFFDEALAGIRAHGLDAEIVSTGGSPNLKNLGQLAGATEHRPGTYIYNDRMQVE
CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCEEEECCCEEEE
AGVASWDDCALTIYSTVVSRAAPERGILDAGSKTLTSDPGGGLDGFGLILDHPEARIARF
ECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCHHHHHHH
AEEHGFLDLSRSNSRPAIGDVVRIVPNHVCVVVNMVDEVVMVRGDEIVGMLPVAARGKLK
HHHCCCEEEECCCCCCCHHHHHHHCCCCEEEEEEHHHHHHHCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
TTPLAAKIARDIGTPALVIDMDRVERNIARVQGLCDAAGVANRPHIKTHKSPLLAQMQI
CCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
KAGARGITCQKLGEAEVMAEAGIDDILISYNLIGEEKMARLGALHERAQMIVAADNEVVI
CCCCCCCCHHHCCCHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHCEEEEEECCCEEE
AGLPAAAARAGRPLGVVVECDTGRQRAGVETPAEAIALARTIAASDGLVFKGLMLYPTED
EECCHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCC
GWPQAQRFFDEALAGIRAHGLDAEIVSTGGSPNLKNLGQLAGATEHRPGTYIYNDRMQVE
CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCEEEECCCEEEE
AGVASWDDCALTIYSTVVSRAAPERGILDAGSKTLTSDPGGGLDGFGLILDHPEARIARF
ECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCHHHHHHH
AEEHGFLDLSRSNSRPAIGDVVRIVPNHVCVVVNMVDEVVMVRGDEIVGMLPVAARGKLK
HHHCCCEEEECCCCCCCHHHHHHHCCCCEEEEEEHHHHHHHCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]