| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cutL [H]
Identifier: 86750309
GI number: 86750309
Start: 3656894
End: 3659278
Strand: Direct
Name: cutL [H]
Synonym: RPB_3198
Alternate gene names: 86750309
Gene position: 3656894-3659278 (Clockwise)
Preceding gene: 86750306
Following gene: 86750312
Centisome position: 68.59
GC content: 68.89
Gene sequence:
>2385_bases ATGAGCTTCATGCAGGACCGTCCTTCGAACCTGTCGTCCGACACCGCCATCGCGCTGCAAAAATTCGGAATTGGCCAGCC GGTGCGACGCAAGGAGGACGACACGCTGCTGCGCGGCAAGGGCCGCTATACCGACGACTGCAACCTGCCCGGCCAGCTCA CCGCGGTGATGGTGCGCAGCCCGCACGCTCACGGCATCATCCGCGGCATCGACGCCGAAGCGGCGCGGGCGATGCCCGGC GTCGTCGGCGTCTACACCGGCGCCGATCTCGCCGCGGCCGGCTATGCCCCGTTCAGCTGCGGGCTGCCGATGAAGAGCCG CGACGGCACGCCGCTGCTGCAGACCAACCGCCCGGCGCTGGCGACCGACAAGGTGCGCTTCGTCGGCGATCCGGTGGCGT TCGTGGTCGCCGAGACGGCGATTCAGGCGCGCGACGCCGCCGAATCGGTCGCGCTCGACATCGCGCCGCTGCCGGCGGTG ACCGACGCCGACGACGCGATCAAGCCCGGCGCGCCGCAGCTCTACGATCACATCCCGAACAACATCGCGCTCGACTATCA CTTCGGCGACGCCGCGGCCGTCGAGGCCGCCTTCGCCTCCGCCGCGCATGTCACCACGCTCGACATCGAGAACACCCGGG TCGCCGCGGTGCCGATGGAGCCGCGCACCGGGCTCGCCAGTTACGACCGGCAGAACGGCCGCTATACCATCCAGCTCCCG ACCCAGGGCGTCGCCGGCAACCGCAACACGCTGGCGAAGCTGCTCGGCGTGCCGACCGACAAGGTGCGGGTGCTGACCGG CCAGGTCGGCGGCTCGTTCGGGATGAAGAACATCTCCTATCCCGAATACATCTGCATCCTGCACGCGGCGAAAGCGCTCG GCCGGCCGGTGAAGTGGACCGACGAACGCTCGTCGGCGTTCCTGTCCGACAGCCACGGCCGCGGCCAGCAGATCCGCGCC GAGCTGGCGCTCGATGCCGCCGGCAAGTTTCTGGCGATCCGCCTCAGTGGCACCGGCAATCTCGGCGCCTACATCACCGG CGTGGCGCCGCTGCCGCTGTCGCTCAACACCGGCAAGAACATCGGCAGCGTGTATCGCACGCCGCTGCTCGGCGTCGACA TCAAATGCGTCGTCACCAACGTCACGCTGATGGGCGCCTATCGCGGCGCCGGCCGGCCCGAGGCGAACTACTTCCTGGAG CGGCTGATCGATCGCGCCGCCGACGAGATCGGCATCGACCGCCTCGCCTTGCGCAAGCGCAACTTCATCAAGCCGCAGCA ATTGCCGTTCACCGCCTGCTCGGGCGTCACCTATGACAGCGGCGATTTCGGCGGCGTGTTCGCGCAGGCGCTGGAGCTGT CGGACCATGCCGGCTTCGCCCAACGCAAGAAGGAGAGCCGCAAGCGCGGCAAACTGCGCGGCATCGCGGTCGGCTCCTAT CTCGAAGTCACCGCCCCGCCGAGCGCCGAACTCGGCAAGATCGTGTTCGAGGAAGACGGCACAATTCGGCTGATCACCGG CACGCTCGACTACGGCCAGGGCCACGCCACGCCGTTCGCGCAGGTGCTGAGTACGTATCTCGGCGTGCCGTTCGACCGCA TCCGGCTCGAACAGGGCGACAGCGACGTCGTCCACACCGGCAACGGCACCGGCGGCTCGCGCTCGATCACCGCCAGCGGC ATGGCGATCGTCGAGGCGTCGCAGCAAGTGATCGCCAAGGGCAAGGCCGCGGCGTCGCATCTCTTGGAGACCGCGGAGGC CGACATCGAATTCGCCGATGGTCGCTTCACCGTGGCGGGCACCGATCGCAGCATCGGCATCATGGAGCTGGCGCAGCGGC TGCGCGAGGCGAAACTCCCCGACGGCGTGCCGGCGTCGCTCGACGTCGATCACACCGTCAAGGCGGTCCCCTCCGCCTTC CCCAATGGCTGCCACGTCGCCGAGGTCGAGATCGATCCCGACACCGGCGTCACCCGCGTGGTGCGCTACACCGCGGTCAA TGATTTCGGCGTCGTGGTCAATCCGATGATCGTCGCAGGCCAGTTGCACGGCGGCGTCGCGCAAGGCATCGGCCAGGCGC TGATGGAGAAGATGTCCTATGACGGCGACGGCCAGCCGATCACCGGCTCGCTGCAGGACTACGCGCTGCCGCGCGCCGAG GACATTCCGCCGATGGCGGTCGGCGATCACCCCGTGCCTGCGCCCGGCAATCCGCTCGGCACCAAGGGCTGCGGCGAAGC CGGCTGCGCCGGCTCGCTGGCGAGCGTCGTCAATGCCGTGCTCGACGCGCTGAAAGACCACGGCGTCAAATCCCTCGACA TGCCGCTGACCTCGGAGAAGGTCTGGCGCGCGATCCGGGAGGCGAAGGAGACGGCGGCGGCGTGA
Upstream 100 bases:
>100_bases TGTCGTGCTGCCGCCGCTGCTTTATCTGAAGGCCGTCAACCTCCGCCCAGGTTACACGAAAACCACCGCGACGCGGCTTT TATCTCGTCACAGCGCCGGA
Downstream 100 bases:
>100_bases GGCACGAAACATCAGCCGCGCTGATGAAGCGTAGCGCCGGCAACCAGCAAAGCCGTCATGCGCGGGCTTGACCCGCGCAT CCATCGCGCGCGCAGCGCGC
Product: carbon-monoxide dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 794; Mature: 793
Protein sequence:
>794_residues MSFMQDRPSNLSSDTAIALQKFGIGQPVRRKEDDTLLRGKGRYTDDCNLPGQLTAVMVRSPHAHGIIRGIDAEAARAMPG VVGVYTGADLAAAGYAPFSCGLPMKSRDGTPLLQTNRPALATDKVRFVGDPVAFVVAETAIQARDAAESVALDIAPLPAV TDADDAIKPGAPQLYDHIPNNIALDYHFGDAAAVEAAFASAAHVTTLDIENTRVAAVPMEPRTGLASYDRQNGRYTIQLP TQGVAGNRNTLAKLLGVPTDKVRVLTGQVGGSFGMKNISYPEYICILHAAKALGRPVKWTDERSSAFLSDSHGRGQQIRA ELALDAAGKFLAIRLSGTGNLGAYITGVAPLPLSLNTGKNIGSVYRTPLLGVDIKCVVTNVTLMGAYRGAGRPEANYFLE RLIDRAADEIGIDRLALRKRNFIKPQQLPFTACSGVTYDSGDFGGVFAQALELSDHAGFAQRKKESRKRGKLRGIAVGSY LEVTAPPSAELGKIVFEEDGTIRLITGTLDYGQGHATPFAQVLSTYLGVPFDRIRLEQGDSDVVHTGNGTGGSRSITASG MAIVEASQQVIAKGKAAASHLLETAEADIEFADGRFTVAGTDRSIGIMELAQRLREAKLPDGVPASLDVDHTVKAVPSAF PNGCHVAEVEIDPDTGVTRVVRYTAVNDFGVVVNPMIVAGQLHGGVAQGIGQALMEKMSYDGDGQPITGSLQDYALPRAE DIPPMAVGDHPVPAPGNPLGTKGCGEAGCAGSLASVVNAVLDALKDHGVKSLDMPLTSEKVWRAIREAKETAAA
Sequences:
>Translated_794_residues MSFMQDRPSNLSSDTAIALQKFGIGQPVRRKEDDTLLRGKGRYTDDCNLPGQLTAVMVRSPHAHGIIRGIDAEAARAMPG VVGVYTGADLAAAGYAPFSCGLPMKSRDGTPLLQTNRPALATDKVRFVGDPVAFVVAETAIQARDAAESVALDIAPLPAV TDADDAIKPGAPQLYDHIPNNIALDYHFGDAAAVEAAFASAAHVTTLDIENTRVAAVPMEPRTGLASYDRQNGRYTIQLP TQGVAGNRNTLAKLLGVPTDKVRVLTGQVGGSFGMKNISYPEYICILHAAKALGRPVKWTDERSSAFLSDSHGRGQQIRA ELALDAAGKFLAIRLSGTGNLGAYITGVAPLPLSLNTGKNIGSVYRTPLLGVDIKCVVTNVTLMGAYRGAGRPEANYFLE RLIDRAADEIGIDRLALRKRNFIKPQQLPFTACSGVTYDSGDFGGVFAQALELSDHAGFAQRKKESRKRGKLRGIAVGSY LEVTAPPSAELGKIVFEEDGTIRLITGTLDYGQGHATPFAQVLSTYLGVPFDRIRLEQGDSDVVHTGNGTGGSRSITASG MAIVEASQQVIAKGKAAASHLLETAEADIEFADGRFTVAGTDRSIGIMELAQRLREAKLPDGVPASLDVDHTVKAVPSAF PNGCHVAEVEIDPDTGVTRVVRYTAVNDFGVVVNPMIVAGQLHGGVAQGIGQALMEKMSYDGDGQPITGSLQDYALPRAE DIPPMAVGDHPVPAPGNPLGTKGCGEAGCAGSLASVVNAVLDALKDHGVKSLDMPLTSEKVWRAIREAKETAAA >Mature_793_residues SFMQDRPSNLSSDTAIALQKFGIGQPVRRKEDDTLLRGKGRYTDDCNLPGQLTAVMVRSPHAHGIIRGIDAEAARAMPGV VGVYTGADLAAAGYAPFSCGLPMKSRDGTPLLQTNRPALATDKVRFVGDPVAFVVAETAIQARDAAESVALDIAPLPAVT DADDAIKPGAPQLYDHIPNNIALDYHFGDAAAVEAAFASAAHVTTLDIENTRVAAVPMEPRTGLASYDRQNGRYTIQLPT QGVAGNRNTLAKLLGVPTDKVRVLTGQVGGSFGMKNISYPEYICILHAAKALGRPVKWTDERSSAFLSDSHGRGQQIRAE LALDAAGKFLAIRLSGTGNLGAYITGVAPLPLSLNTGKNIGSVYRTPLLGVDIKCVVTNVTLMGAYRGAGRPEANYFLER LIDRAADEIGIDRLALRKRNFIKPQQLPFTACSGVTYDSGDFGGVFAQALELSDHAGFAQRKKESRKRGKLRGIAVGSYL EVTAPPSAELGKIVFEEDGTIRLITGTLDYGQGHATPFAQVLSTYLGVPFDRIRLEQGDSDVVHTGNGTGGSRSITASGM AIVEASQQVIAKGKAAASHLLETAEADIEFADGRFTVAGTDRSIGIMELAQRLREAKLPDGVPASLDVDHTVKAVPSAFP NGCHVAEVEIDPDTGVTRVVRYTAVNDFGVVVNPMIVAGQLHGGVAQGIGQALMEKMSYDGDGQPITGSLQDYALPRAED IPPMAVGDHPVPAPGNPLGTKGCGEAGCAGSLASVVNAVLDALKDHGVKSLDMPLTSEKVWRAIREAKETAAA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=793, Percent_Identity=25.2206809583859, Blast_Score=144, Evalue=3e-34, Organism=Homo sapiens, GI91823271, Length=715, Percent_Identity=23.6363636363636, Blast_Score=131, Evalue=3e-30, Organism=Escherichia coli, GI1789230, Length=767, Percent_Identity=28.0312907431552, Blast_Score=217, Evalue=2e-57, Organism=Escherichia coli, GI1789246, Length=818, Percent_Identity=25.3056234718826, Blast_Score=189, Evalue=6e-49, Organism=Escherichia coli, GI1786478, Length=783, Percent_Identity=26.8199233716475, Blast_Score=127, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17539860, Length=791, Percent_Identity=25.2844500632111, Blast_Score=155, Evalue=9e-38, Organism=Caenorhabditis elegans, GI17540638, Length=721, Percent_Identity=23.7170596393897, Blast_Score=144, Evalue=2e-34, Organism=Caenorhabditis elegans, GI32566215, Length=798, Percent_Identity=22.4310776942356, Blast_Score=114, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 83671; Mature: 83540
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFMQDRPSNLSSDTAIALQKFGIGQPVRRKEDDTLLRGKGRYTDDCNLPGQLTAVMVRS CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEC PHAHGIIRGIDAEAARAMPGVVGVYTGADLAAAGYAPFSCGLPMKSRDGTPLLQTNRPAL CCCCCEEECCCHHHHHHCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCEEECCCCCC ATDKVRFVGDPVAFVVAETAIQARDAAESVALDIAPLPAVTDADDAIKPGAPQLYDHIPN CCCCEEECCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCHHHHHCCC NIALDYHFGDAAAVEAAFASAAHVTTLDIENTRVAAVPMEPRTGLASYDRQNGRYTIQLP CEEEEEECCCHHHHHHHHHCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEEC TQGVAGNRNTLAKLLGVPTDKVRVLTGQVGGSFGMKNISYPEYICILHAAKALGRPVKWT CCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC DERSSAFLSDSHGRGQQIRAELALDAAGKFLAIRLSGTGNLGAYITGVAPLPLSLNTGKN CCCCCEEECCCCCCCHHEEHHHEEECCCCEEEEEEECCCCCCEEEEECCCCCEECCCCCC IGSVYRTPLLGVDIKCVVTNVTLMGAYRGAGRPEANYFLERLIDRAADEIGIDRLALRKR CHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH NFIKPQQLPFTACSGVTYDSGDFGGVFAQALELSDHAGFAQRKKESRKRGKLRGIAVGSY CCCCCCCCCCHHHCCCEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCE LEVTAPPSAELGKIVFEEDGTIRLITGTLDYGQGHATPFAQVLSTYLGVPFDRIRLEQGD EEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHEEEECCC SDVVHTGNGTGGSRSITASGMAIVEASQQVIAKGKAAASHLLETAEADIEFADGRFTVAG CCEEECCCCCCCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEC TDRSIGIMELAQRLREAKLPDGVPASLDVDHTVKAVPSAFPNGCHVAEVEIDPDTGVTRV CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHE VRYTAVNDFGVVVNPMIVAGQLHGGVAQGIGQALMEKMSYDGDGQPITGSLQDYALPRAE EEEEEECCCCEEECCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEECCHHHHCCCCCC DIPPMAVGDHPVPAPGNPLGTKGCGEAGCAGSLASVVNAVLDALKDHGVKSLDMPLTSEK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCHHH VWRAIREAKETAAA HHHHHHHHHHHHCC >Mature Secondary Structure SFMQDRPSNLSSDTAIALQKFGIGQPVRRKEDDTLLRGKGRYTDDCNLPGQLTAVMVRS CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEC PHAHGIIRGIDAEAARAMPGVVGVYTGADLAAAGYAPFSCGLPMKSRDGTPLLQTNRPAL CCCCCEEECCCHHHHHHCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCEEECCCCCC ATDKVRFVGDPVAFVVAETAIQARDAAESVALDIAPLPAVTDADDAIKPGAPQLYDHIPN CCCCEEECCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCHHHHHCCC NIALDYHFGDAAAVEAAFASAAHVTTLDIENTRVAAVPMEPRTGLASYDRQNGRYTIQLP CEEEEEECCCHHHHHHHHHCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEEC TQGVAGNRNTLAKLLGVPTDKVRVLTGQVGGSFGMKNISYPEYICILHAAKALGRPVKWT CCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC DERSSAFLSDSHGRGQQIRAELALDAAGKFLAIRLSGTGNLGAYITGVAPLPLSLNTGKN CCCCCEEECCCCCCCHHEEHHHEEECCCCEEEEEEECCCCCCEEEEECCCCCEECCCCCC IGSVYRTPLLGVDIKCVVTNVTLMGAYRGAGRPEANYFLERLIDRAADEIGIDRLALRKR CHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH NFIKPQQLPFTACSGVTYDSGDFGGVFAQALELSDHAGFAQRKKESRKRGKLRGIAVGSY CCCCCCCCCCHHHCCCEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCE LEVTAPPSAELGKIVFEEDGTIRLITGTLDYGQGHATPFAQVLSTYLGVPFDRIRLEQGD EEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHEEEECCC SDVVHTGNGTGGSRSITASGMAIVEASQQVIAKGKAAASHLLETAEADIEFADGRFTVAG CCEEECCCCCCCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEC TDRSIGIMELAQRLREAKLPDGVPASLDVDHTVKAVPSAFPNGCHVAEVEIDPDTGVTRV CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHE VRYTAVNDFGVVVNPMIVAGQLHGGVAQGIGQALMEKMSYDGDGQPITGSLQDYALPRAE EEEEEECCCCEEECCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEECCHHHHCCCCCC DIPPMAVGDHPVPAPGNPLGTKGCGEAGCAGSLASVVNAVLDALKDHGVKSLDMPLTSEK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCHHH VWRAIREAKETAAA HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]