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The map label for this gene is ssuC [C]

Identifier: 86750206

GI number: 86750206

Start: 3525276

End: 3526055

Strand: Direct

Name: ssuC [C]

Synonym: RPB_3093

Alternate gene names: 86750206

Gene position: 3525276-3526055 (Clockwise)

Preceding gene: 86750205

Following gene: 86750207

Centisome position: 66.12

GC content: 64.49

Gene sequence:

>780_bases
GTGAGCTATTGGCGCAGGACGGAGCCCGCGCGAACCATCGTCGTGGTGCTGGCGGTTCTCACCGCGATCTGGGAACTGTC
GGTTCACCTGTTCGGGATCCGCGCCTTCCTGTTGCCCGCGCCGTCCATCGTGATTGCCGACATCGTCGCCAATCCCGTGT
TTTTCGGACGGCAGTCGCTGTACACGCTGTACGTCACCACGGCCGGATTCCTGATCGCGCTGATCGGCGGCGTGCTGGCT
GCGATCGCCATCGTGTCGTCGAGCTTCATCGATCGCACCTTCTACACGCTGCTGGTGGCGACCAATTCGATCCCGAAGGT
CGCACTGGCGCCGCTGTTCGTGATCTGGCTCGGGACCGGCGGCGCGCCGAAGATCGCGATCGCCGCGATCATCGCGATCT
TCCCGATCGTGATCAACACCACCGTCGGCCTGCGGGCGATCGACCACGACATGATCGACCTCGCGCGATCGGCGAGGGCC
TCGCGGCTCGACATCATGATGAAGGTCCGCTTTCCCAACGCGCTGCCGAGCCTGTTCGCGGGCGCCAAGATCGGCGTCTC
ATTCGCGCTGATCGGCGCGATCGTCGGCGAGTTCGTCGCCGGAGAACAAGGGCTCGGCTACGTCATCCTCACCAGCCAAG
CGACCTTCAACAGCACGCGCGCCTTCGCGGCGATCGTGGTGCTGGGCATCCTCGGCACGATCATGTTCTTCGCCATCGAA
TGGATCGAGCGCTGGATGCTCCCCTGGCACGTCTCGCAGCGCGCCAAAACGGGACACTGA

Upstream 100 bases:

>100_bases
CGCCCGCTCAGCATTCGTCAAACCGAGGACTTCGGCAAATATGTCCAGCACATCCGTCATCTCTTCGCATCGATGGGGCT
CGTCAAAGCTGAGTAATGGT

Downstream 100 bases:

>100_bases
TCGCGGTGGCGATAAATCCGGTCGATCACGGCTGAGCGCGCCCGTCCCTCCACGAAAGCGGCGCTCCGAAGCGCCGTGAC
GATCCACTTCGAGTCCTCGA

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSYWRRTEPARTIVVVLAVLTAIWELSVHLFGIRAFLLPAPSIVIADIVANPVFFGRQSLYTLYVTTAGFLIALIGGVLA
AIAIVSSSFIDRTFYTLLVATNSIPKVALAPLFVIWLGTGGAPKIAIAAIIAIFPIVINTTVGLRAIDHDMIDLARSARA
SRLDIMMKVRFPNALPSLFAGAKIGVSFALIGAIVGEFVAGEQGLGYVILTSQATFNSTRAFAAIVVLGILGTIMFFAIE
WIERWMLPWHVSQRAKTGH

Sequences:

>Translated_259_residues
MSYWRRTEPARTIVVVLAVLTAIWELSVHLFGIRAFLLPAPSIVIADIVANPVFFGRQSLYTLYVTTAGFLIALIGGVLA
AIAIVSSSFIDRTFYTLLVATNSIPKVALAPLFVIWLGTGGAPKIAIAAIIAIFPIVINTTVGLRAIDHDMIDLARSARA
SRLDIMMKVRFPNALPSLFAGAKIGVSFALIGAIVGEFVAGEQGLGYVILTSQATFNSTRAFAAIVVLGILGTIMFFAIE
WIERWMLPWHVSQRAKTGH
>Mature_258_residues
SYWRRTEPARTIVVVLAVLTAIWELSVHLFGIRAFLLPAPSIVIADIVANPVFFGRQSLYTLYVTTAGFLIALIGGVLAA
IAIVSSSFIDRTFYTLLVATNSIPKVALAPLFVIWLGTGGAPKIAIAAIIAIFPIVINTTVGLRAIDHDMIDLARSARAS
RLDIMMKVRFPNALPSLFAGAKIGVSFALIGAIVGEFVAGEQGLGYVILTSQATFNSTRAFAAIVVLGILGTIMFFAIEW
IERWMLPWHVSQRAKTGH

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=166, Percent_Identity=28.9156626506024, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786564, Length=241, Percent_Identity=26.1410788381743, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27957; Mature: 27825

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYWRRTEPARTIVVVLAVLTAIWELSVHLFGIRAFLLPAPSIVIADIVANPVFFGRQSL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCHHH
YTLYVTTAGFLIALIGGVLAAIAIVSSSFIDRTFYTLLVATNSIPKVALAPLFVIWLGTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCC
GAPKIAIAAIIAIFPIVINTTVGLRAIDHDMIDLARSARASRLDIMMKVRFPNALPSLFA
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHEEEEEEECCCHHHHHHC
GAKIGVSFALIGAIVGEFVAGEQGLGYVILTSQATFNSTRAFAAIVVLGILGTIMFFAIE
CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
WIERWMLPWHVSQRAKTGH
HHHHHCCCHHHHCCCCCCC
>Mature Secondary Structure 
SYWRRTEPARTIVVVLAVLTAIWELSVHLFGIRAFLLPAPSIVIADIVANPVFFGRQSL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCHHH
YTLYVTTAGFLIALIGGVLAAIAIVSSSFIDRTFYTLLVATNSIPKVALAPLFVIWLGTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCC
GAPKIAIAAIIAIFPIVINTTVGLRAIDHDMIDLARSARASRLDIMMKVRFPNALPSLFA
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHEEEEEEECCCHHHHHHC
GAKIGVSFALIGAIVGEFVAGEQGLGYVILTSQATFNSTRAFAAIVVLGILGTIMFFAIE
CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
WIERWMLPWHVSQRAKTGH
HHHHHCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]