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The map label for this gene is 86750163

Identifier: 86750163

GI number: 86750163

Start: 3470661

End: 3472307

Strand: Direct

Name: 86750163

Synonym: RPB_3046

Alternate gene names: NA

Gene position: 3470661-3472307 (Clockwise)

Preceding gene: 86750158

Following gene: 86750164

Centisome position: 65.1

GC content: 56.34

Gene sequence:

>1647_bases
ATGTACCTATGGAAACGCGGCACCGTTTATTGGTTTCGCCGATCAATCCCGCAGGATCTGAAGGCTCACGTTGGCTCGAA
TGACGCCGCCGCGAGTCTCCGGACCGGCGACCGTAGGAAGGCCCGGAGACGGGCAATGAGGCTGGCAGTGACGATGGATG
AATGGTCGGAGGCGGTCCGGCAAGCACAATTGAATGATCTGGAACAACCCGACCGCGCCCTTTTGCTGAAAATGTTCGAC
GACGCGATGGGTCTCGTCGAAAGCCAGCAGGCGACCGACAGCACCCGGCAGCAGGCGGACGCAATCCAGGCAGCCATCAC
CGAGTACAAGGCGACGGCCGGAACTCGGGAGCGTCTTTCGGGGATCAATCAACGTATCCGTGTAATCGGCGACCGCGTAG
CGGCCTTGACCGCCGCACCGGCGAAGGCTCCCTCAAGCGAGATTGCCGACCTTCGTGCCGACTTGATGAACGAGATGGCG
AAGGTCCGGAATGACGTTCAAAACGCGCACAAGAATCAGTGGTCCGCCGACCTCCTGTCGACCAAGATCGACGATTACGT
TCAGGCCAAGGCCAAAGAGCTTGGCGGCACGAAGCATGTTTCGACAATTGGGCCGCGGATCAGGAATTTTCTGGAAACGA
TCGGCGACAAGCCACTCCGCGACTACACACGCCAGGATTTTGAACGATATCGCGATATCTTGGACCGCACGCCGAAACGA
GCTTTCGACCGGTTCAAAACCAACAATCTTGCCGATGCCGCCGAAAGGAACGAAAAGCGCGCACGGCCCTTTGAAGTTAT
CGATGACAAAACCGTCGACGACGACTATCTGACACCCGTCAAAACGTTCTTCATGCATCTTGTTCGGAATCTCTGGATTC
CCGCGACCCCTGCCATCGGCATCGTCTCCTCGCGGACACGCGAAAGCCGCAGGACCGACCGACCTGACGAAGGTCGGCGA
GCTTTCAAGCCCGATCCGATCAATGCCTATTTCCGGTACATCGTCCAGAAACGATCGCGAGCGACAGAAGACTTTTGGCT
GCCGATCCTGGCTCTATATACCGGTGCTCGCCTCAATGAACTCTGCCAGATCGAGCCGCGCCGGATTATTCTACACAATG
GCCGCTGGCATATCGATTTGCTGACGATTTACGATCGAGATGAGATCGAGCGCGCGGTGAAAGGAATGAAAAAAGAGGAA
AAGTCTGCTGCGAGATTGAAACTGAAGACCGCATCGGCGCGCCGACAAATTCCTATTCACGACGACCTGATCAAGATCGG
ATTTATTGATTTTGTCGATCAGCGGAGAAATCACCCCAAGTACACGCGCCTGTTTCCCAACCTGCGGCCGGATCAATACG
GATATTTTTCATCCGCCGTCGGGAAACGGCTAAACCGCGACATCAAGAGCGCTGGCGCGAAAACCGACGATACCTCGTTC
TACAGTCTCCGCCACAATTTCGCGGCTGCATTAGAGCGGGCGCTTGTGCCCCATCGCACGAAAGACAGGATCATGGGCCA
CCTCGTCGTCGGAGCCCAAGGTCACTACACCGATCCCGAACTTGAGGATGTCGAAACCGCAGTCATCGAGCGCGTCAGCT
TTCCGGGTGTCGACATCGCTCCATATCTTTCCCAAAAACGCTTGTAA

Upstream 100 bases:

>100_bases
CCACCCCTTCCGCCATGTCTAAGCAATTGATTTTACTAATGTAAGAAGCATTCTAGCGACTCGATTCTGTTACAATTTGA
TGTAACGTTTCGAGGCGCTC

Downstream 100 bases:

>100_bases
GACCGAGCAAACAGAACGCGGTTGACGGTCGCGAGGGCCGCCTACACTCGTCCCTGCGTCGAGCCCAAGGGGCTCGACGG
CAGCGCCTTCTTAGGCGCGC

Product: Phage integrase

Products: NA

Alternate protein names: Phage Integrase; Phage Integrase Family Protein; Integrase; Phage-Related Integrase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Site Specific Recombinase; Phage Integerase; Integrase/Resolvase Recombinase Protein; Site-Specific Recombinase

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MYLWKRGTVYWFRRSIPQDLKAHVGSNDAAASLRTGDRRKARRRAMRLAVTMDEWSEAVRQAQLNDLEQPDRALLLKMFD
DAMGLVESQQATDSTRQQADAIQAAITEYKATAGTRERLSGINQRIRVIGDRVAALTAAPAKAPSSEIADLRADLMNEMA
KVRNDVQNAHKNQWSADLLSTKIDDYVQAKAKELGGTKHVSTIGPRIRNFLETIGDKPLRDYTRQDFERYRDILDRTPKR
AFDRFKTNNLADAAERNEKRARPFEVIDDKTVDDDYLTPVKTFFMHLVRNLWIPATPAIGIVSSRTRESRRTDRPDEGRR
AFKPDPINAYFRYIVQKRSRATEDFWLPILALYTGARLNELCQIEPRRIILHNGRWHIDLLTIYDRDEIERAVKGMKKEE
KSAARLKLKTASARRQIPIHDDLIKIGFIDFVDQRRNHPKYTRLFPNLRPDQYGYFSSAVGKRLNRDIKSAGAKTDDTSF
YSLRHNFAAALERALVPHRTKDRIMGHLVVGAQGHYTDPELEDVETAVIERVSFPGVDIAPYLSQKRL

Sequences:

>Translated_548_residues
MYLWKRGTVYWFRRSIPQDLKAHVGSNDAAASLRTGDRRKARRRAMRLAVTMDEWSEAVRQAQLNDLEQPDRALLLKMFD
DAMGLVESQQATDSTRQQADAIQAAITEYKATAGTRERLSGINQRIRVIGDRVAALTAAPAKAPSSEIADLRADLMNEMA
KVRNDVQNAHKNQWSADLLSTKIDDYVQAKAKELGGTKHVSTIGPRIRNFLETIGDKPLRDYTRQDFERYRDILDRTPKR
AFDRFKTNNLADAAERNEKRARPFEVIDDKTVDDDYLTPVKTFFMHLVRNLWIPATPAIGIVSSRTRESRRTDRPDEGRR
AFKPDPINAYFRYIVQKRSRATEDFWLPILALYTGARLNELCQIEPRRIILHNGRWHIDLLTIYDRDEIERAVKGMKKEE
KSAARLKLKTASARRQIPIHDDLIKIGFIDFVDQRRNHPKYTRLFPNLRPDQYGYFSSAVGKRLNRDIKSAGAKTDDTSF
YSLRHNFAAALERALVPHRTKDRIMGHLVVGAQGHYTDPELEDVETAVIERVSFPGVDIAPYLSQKRL
>Mature_548_residues
MYLWKRGTVYWFRRSIPQDLKAHVGSNDAAASLRTGDRRKARRRAMRLAVTMDEWSEAVRQAQLNDLEQPDRALLLKMFD
DAMGLVESQQATDSTRQQADAIQAAITEYKATAGTRERLSGINQRIRVIGDRVAALTAAPAKAPSSEIADLRADLMNEMA
KVRNDVQNAHKNQWSADLLSTKIDDYVQAKAKELGGTKHVSTIGPRIRNFLETIGDKPLRDYTRQDFERYRDILDRTPKR
AFDRFKTNNLADAAERNEKRARPFEVIDDKTVDDDYLTPVKTFFMHLVRNLWIPATPAIGIVSSRTRESRRTDRPDEGRR
AFKPDPINAYFRYIVQKRSRATEDFWLPILALYTGARLNELCQIEPRRIILHNGRWHIDLLTIYDRDEIERAVKGMKKEE
KSAARLKLKTASARRQIPIHDDLIKIGFIDFVDQRRNHPKYTRLFPNLRPDQYGYFSSAVGKRLNRDIKSAGAKTDDTSF
YSLRHNFAAALERALVPHRTKDRIMGHLVVGAQGHYTDPELEDVETAVIERVSFPGVDIAPYLSQKRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63028; Mature: 63028

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCC
>Mature Secondary Structure
MYLWKRGTVYWFRRSIPQDLKAHVGSNDAAASLRTGDRRKARRRAMRLAVTMDEWSEAVR
CCEECCCCHHHHHHCCCHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
QAQLNDLEQPDRALLLKMFDDAMGLVESQQATDSTRQQADAIQAAITEYKATAGTRERLS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
GINQRIRVIGDRVAALTAAPAKAPSSEIADLRADLMNEMAKVRNDVQNAHKNQWSADLLS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
TKIDDYVQAKAKELGGTKHVSTIGPRIRNFLETIGDKPLRDYTRQDFERYRDILDRTPKR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHH
AFDRFKTNNLADAAERNEKRARPFEVIDDKTVDDDYLTPVKTFFMHLVRNLWIPATPAIG
HHHHHHCCCHHHHHHHHHHCCCCCHHCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCHH
IVSSRTRESRRTDRPDEGRRAFKPDPINAYFRYIVQKRSRATEDFWLPILALYTGARLNE
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHH
LCQIEPRRIILHNGRWHIDLLTIYDRDEIERAVKGMKKEEKSAARLKLKTASARRQIPIH
HHCCCCCEEEEECCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCC
DDLIKIGFIDFVDQRRNHPKYTRLFPNLRPDQYGYFSSAVGKRLNRDIKSAGAKTDDTSF
HHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHH
YSLRHNFAAALERALVPHRTKDRIMGHLVVGAQGHYTDPELEDVETAVIERVSFPGVDIA
HHHHHHHHHHHHHHHCCCCCHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHH
PYLSQKRL
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA