| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is aat
Identifier: 86750142
GI number: 86750142
Start: 3448365
End: 3449039
Strand: Direct
Name: aat
Synonym: RPB_3025
Alternate gene names: 86750142
Gene position: 3448365-3449039 (Clockwise)
Preceding gene: 86750141
Following gene: 86750144
Centisome position: 64.68
GC content: 67.26
Gene sequence:
>675_bases ATGACATCCCGCGACTCCGCCGCCGCCGAGATCACCCCCGAAGTGCTGCTGCGCGCTTATGCCTGCGGCATCTTTCCGAT GGCCGAAAGCGTCGACGATCCGACGCTGTTCTGGGTCGAGCCGGAATTGCGCGGCATCATTCCGCTCGGCGGCTTTCGCG TCGCCTCCCGGCTCGCCCGCACGGTGCGGTCGGACGCTTTCACCGTCACCGTCAATCGCGACTTCAAGGGCGTGATCGAC GGCTGCGCCGCGCCGCAGCCAGGCCGCGACGACACCTGGATCAACCGCCGGATTCGCGAGCTGTATATCGGCCTGCACGG CATCGGCCATTGCCACAGCGTCGAGGTCTGGCAGGACGGCGACCTCGCCGGCGGTCTGTACGGCGTCAGCCTCGGCCGCG CCTTCTTCGGCGAGAGCATGTTTCACCGCGCCCGCGACGCCTCCAAGGTGGCGCTGGTGCATCTCGTCGCCCGGTTGCTT GCAGGCGGTTATGAACTGCTCGACACCCAGTTCGTCACCGACCATCTGCGCAGCTTCGGCGCAATCGAAGTCCCGCGGCA ACGCTACCGTTCGATGCTCGACGACGCACTGCAGGGCATCGCCGCCTTCGATGCGCTGCCGGTGGATCAGCCCGTGACGG GCGCCAAAGCGCTGGAGATCATCGCGGCGCACTGA
Upstream 100 bases:
>100_bases GCTGGAATCCCGATCCGATCCGCTGACCGCGCTCCGGTCCCAATCGGCATTCGCTTCCGCCCCGGCTCGCGACCTCCGTC CCGCCCTGCTATGCTCGGGC
Downstream 100 bases:
>100_bases GCACGGCGATCAACGATCCCTCTGTCAGACCGGGAGCGGTTACTGCCGGAATGCCGGCAAAGGCGGCGGCGGCGCCTGCT GGGTCTGGCGCGGTGGCGGC
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTSRDSAAAEITPEVLLRAYACGIFPMAESVDDPTLFWVEPELRGIIPLGGFRVASRLARTVRSDAFTVTVNRDFKGVID GCAAPQPGRDDTWINRRIRELYIGLHGIGHCHSVEVWQDGDLAGGLYGVSLGRAFFGESMFHRARDASKVALVHLVARLL AGGYELLDTQFVTDHLRSFGAIEVPRQRYRSMLDDALQGIAAFDALPVDQPVTGAKALEIIAAH
Sequences:
>Translated_224_residues MTSRDSAAAEITPEVLLRAYACGIFPMAESVDDPTLFWVEPELRGIIPLGGFRVASRLARTVRSDAFTVTVNRDFKGVID GCAAPQPGRDDTWINRRIRELYIGLHGIGHCHSVEVWQDGDLAGGLYGVSLGRAFFGESMFHRARDASKVALVHLVARLL AGGYELLDTQFVTDHLRSFGAIEVPRQRYRSMLDDALQGIAAFDALPVDQPVTGAKALEIIAAH >Mature_223_residues TSRDSAAAEITPEVLLRAYACGIFPMAESVDDPTLFWVEPELRGIIPLGGFRVASRLARTVRSDAFTVTVNRDFKGVIDG CAAPQPGRDDTWINRRIRELYIGLHGIGHCHSVEVWQDGDLAGGLYGVSLGRAFFGESMFHRARDASKVALVHLVARLLA GGYELLDTQFVTDHLRSFGAIEVPRQRYRSMLDDALQGIAAFDALPVDQPVTGAKALEIIAAH
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=192, Percent_Identity=39.0625, Blast_Score=139, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_RHOP2 (Q2IVN3)
Other databases:
- EMBL: CP000250 - RefSeq: YP_486638.1 - ProteinModelPortal: Q2IVN3 - SMR: Q2IVN3 - STRING: Q2IVN3 - GeneID: 3910824 - GenomeReviews: CP000250_GR - KEGG: rpb:RPB_3025 - eggNOG: COG2360 - HOGENOM: HBG485363 - OMA: GEPILWW - ProtClustDB: PRK00301 - BioCyc: RPAL316058:RPB_3025-MONOMER - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 24490; Mature: 24359
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRDSAAAEITPEVLLRAYACGIFPMAESVDDPTLFWVEPELRGIIPLGGFRVASRLAR CCCCCCCHHHCCHHHHHHHHHHCCCHHHCCCCCCEEEEECCCCCEEECCCHHHHHHHHHH TVRSDAFTVTVNRDFKGVIDGCAAPQPGRDDTWINRRIRELYIGLHGIGHCHSVEVWQDG HHHCCCEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCC DLAGGLYGVSLGRAFFGESMFHRARDASKVALVHLVARLLAGGYELLDTQFVTDHLRSFG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC AIEVPRQRYRSMLDDALQGIAAFDALPVDQPVTGAKALEIIAAH CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEECC >Mature Secondary Structure TSRDSAAAEITPEVLLRAYACGIFPMAESVDDPTLFWVEPELRGIIPLGGFRVASRLAR CCCCCCHHHCCHHHHHHHHHHCCCHHHCCCCCCEEEEECCCCCEEECCCHHHHHHHHHH TVRSDAFTVTVNRDFKGVIDGCAAPQPGRDDTWINRRIRELYIGLHGIGHCHSVEVWQDG HHHCCCEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCC DLAGGLYGVSLGRAFFGESMFHRARDASKVALVHLVARLLAGGYELLDTQFVTDHLRSFG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC AIEVPRQRYRSMLDDALQGIAAFDALPVDQPVTGAKALEIIAAH CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA