Click here to switch to the map view.

The map label for this gene is rcp1 [H]

Identifier: 86750139

GI number: 86750139

Start: 3445309

End: 3445752

Strand: Direct

Name: rcp1 [H]

Synonym: RPB_3022

Alternate gene names: 86750139

Gene position: 3445309-3445752 (Clockwise)

Preceding gene: 86750138

Following gene: 86750140

Centisome position: 64.62

GC content: 59.68

Gene sequence:

>444_bases
ATGAGTAACCCAGTCACCATCATCATGATCGAGGACGACGAGGGCCACGCGCGCCTGATCGAGCGCAATATTCGCCGGTC
CGGCGTCAACAACGAGATCGTTCCGTTCACGTCCGGTACAGCCGCGCTGAACTACCTGTTCGGGGCCGACGGCTCGGGCA
TCGAGCATCAGAATCGCGCGCTCCTGGTGCTGCTCGATCTCAACCTCCCCGACACCAGCGGCATCGATATTCTCCGGCGC
GTCAAGGAAAACGATCATCTCAAATGCACGCCCGTCGTGGTGTTGACCACCACCGACGACGCGCAGGAAATCAAGCGTTG
CTACGAGCTCGGCTGCAACGTCTACATCACCAAGCCGGTGAACTACGAGAGCTTCGCCAACGCGATCCGTCAGCTCGGCC
TGTTCTTTTCCGTGATCCAGGTCCCTCAAACCGAGGCTCCATGA

Upstream 100 bases:

>100_bases
GTGGAACCATGTCGGTGTCCTCGGCGCTCGGCGAGGGCTCGACCTTCACCATCACCTTGCCGATGAAATGGACCACGGCC
ACCAAACGGGAACCCCGCTC

Downstream 100 bases:

>100_bases
CTCCTGCTGCTGCGCCGACTCTGCTGTATATCGACGACGACGAGGCGCTCGGGCGCCTGGTCTCACGCGGCCTGAAGCGA
CAGGGTTTCTGCGTCGAGCA

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSNPVTIIMIEDDEGHARLIERNIRRSGVNNEIVPFTSGTAALNYLFGADGSGIEHQNRALLVLLDLNLPDTSGIDILRR
VKENDHLKCTPVVVLTTTDDAQEIKRCYELGCNVYITKPVNYESFANAIRQLGLFFSVIQVPQTEAP

Sequences:

>Translated_147_residues
MSNPVTIIMIEDDEGHARLIERNIRRSGVNNEIVPFTSGTAALNYLFGADGSGIEHQNRALLVLLDLNLPDTSGIDILRR
VKENDHLKCTPVVVLTTTDDAQEIKRCYELGCNVYITKPVNYESFANAIRQLGLFFSVIQVPQTEAP
>Mature_146_residues
SNPVTIIMIEDDEGHARLIERNIRRSGVNNEIVPFTSGTAALNYLFGADGSGIEHQNRALLVLLDLNLPDTSGIDILRRV
KENDHLKCTPVVVLTTTDDAQEIKRCYELGCNVYITKPVNYESFANAIRQLGLFFSVIQVPQTEAP

Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 16343; Mature: 16212

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPVTIIMIEDDEGHARLIERNIRRSGVNNEIVPFTSGTAALNYLFGADGSGIEHQNRA
CCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCHHEEEEEECCCCCCCCCCCCE
LLVLLDLNLPDTSGIDILRRVKENDHLKCTPVVVLTTTDDAQEIKRCYELGCNVYITKPV
EEEEEECCCCCCCCHHHHHHHCCCCCEEECEEEEEEECCCHHHHHHHHHCCCCEEEECCC
NYESFANAIRQLGLFFSVIQVPQTEAP
CHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SNPVTIIMIEDDEGHARLIERNIRRSGVNNEIVPFTSGTAALNYLFGADGSGIEHQNRA
CCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCHHEEEEEECCCCCCCCCCCCE
LLVLLDLNLPDTSGIDILRRVKENDHLKCTPVVVLTTTDDAQEIKRCYELGCNVYITKPV
EEEEEECCCCCCCCHHHHHHHCCCCCEEECEEEEEEECCCHHHHHHHHHCCCCEEEECCC
NYESFANAIRQLGLFFSVIQVPQTEAP
CHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 9278513 [H]