| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is accC [H]
Identifier: 86750137
GI number: 86750137
Start: 3442308
End: 3443663
Strand: Direct
Name: accC [H]
Synonym: RPB_3020
Alternate gene names: 86750137
Gene position: 3442308-3443663 (Clockwise)
Preceding gene: 86750136
Following gene: 86750138
Centisome position: 64.56
GC content: 65.71
Gene sequence:
>1356_bases ATGTTCGATAAAATTCTCATAGCCAATCGCGGCGAGATCGCTCTGCGGGTTCTGCGTGCGTGCAAGGAACTGGGCATTGC CACGGTCGCCGTGCATTCGACCGCCGACGCGGACGCGATGCATGTCCGGCTCGCGGACGAAAGCGTCTGTATCGGCCCGC CGCCGTCCAAGGACAGCTATCTCAACATCCCGGCGCTGCTGGCGGCCTGCGAGATCACCGGCGCCGACGCGGTGCATCCG GGCTATGGATTTCTATCCGAGAATGCCCGTTTCGCCGAGATTCTCGCCGACCACAATCTGCATTTCATCGGCCCCAAGGC CGAGCACATCCGGCTGATGGGCGACAAGATCGAGGCGAAGAAGACCGCCAGGCGCCTGGGCATCCCCGTGGTGCCGGGCT CGGACGGCGCGGTCGGCCCGGACGACGACGCGATGTCGATCGCCAGGGAGATCGGCTTTCCGGTGCTGGTCAAGGCCGCC GCCGGCGGCGGTGGCCGCGGCATGAAGGTCGCGCACACCGCCGAAGACCTGTCGATGGCGATCTCGACCGCGGGCAACGA GGCCAAGGCCGCCTTCGGCGACGCCTCGGTCTATCTGGAGAAGTATCTGCAGAAGCCGCGCCACATCGAAATCCAGGTGC TGGGTGACGGCCGCGGCGGCGCGATCCATCTCGGCGAGCGTGACTGCTCGCTGCAGCGGCGGCACCAGAAGGTCTGGGAA GAGAGCCCCTCCCCGGTGATCAGCGCGGAAGCCCGCGCCCGGATCGGCGGCATCTGCGCCAAGGCGATGCAGGACATGAG CTATGTCGGCGTCGGCACCATCGAATTCCTCTACGAGGACGGCGAATTCTACTTCATCGAGATGAACACCCGGATCCAGG TCGAGCATCCGGTCACGGAGATGATCACCGGGATCGATCTGGTGCTGGAGCAGATCCGGATCGCCGCCGGCGGCGACCTG CCGGTGTCGCAGGACGAGATCGTGCTCAACGGCCACGCCATCGAGTGCCGGATCAACGCCGAGAATCCGGTGAGCTTCCG GCCGTCGCCGGGCAAGATCGCGCGTTATCATCCACCCGGCGGCCTCGGCGTCCGGATCGATTCCGCAGTCTTCCAAGGCT ACACCATCCCGCCTTATTACGACTCGCTTGTCGGCAAGCTGATCGTCCACGGCAAGACCCGCGGCGAGTGCCTGATGCGG CTGCGGCGGGCGCTGGACGAGATGGTGGTCGACGGCATCGAGACCACACTGCCGCTGTTCCGCGCACTGGTGCGGGAACC GGGGATCATCGACGGCGATTATCATATCCACTGGCTGGAGCAGTATCTCGCCGGCGTCGCCCTCGAGGGCCGCTGA
Upstream 100 bases:
>100_bases GTCGCGAATGGCGAGTGGCGAATAGAGCTGCATCGCAACGCCATCCGCCCCCCATTCGCCACTCGCCATTTGCAATTCGC CTCTCAATCCGGTGGCCCCG
Downstream 100 bases:
>100_bases AGAATATTTGCGTCGGGCGTGGAACCAAGTTCCGGCTCCCGCGTTAGCGTGGCTGCAGATTTGGCCGCCTTGCGGGGATT GTTCTTGCTTTGTTTCAAAT
Product: acetyl-CoA carboxylase biotin carboxylase subunit
Products: NA
Alternate protein names: Acetyl-CoA carboxylase subunit A; ACC [H]
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MFDKILIANRGEIALRVLRACKELGIATVAVHSTADADAMHVRLADESVCIGPPPSKDSYLNIPALLAACEITGADAVHP GYGFLSENARFAEILADHNLHFIGPKAEHIRLMGDKIEAKKTARRLGIPVVPGSDGAVGPDDDAMSIAREIGFPVLVKAA AGGGGRGMKVAHTAEDLSMAISTAGNEAKAAFGDASVYLEKYLQKPRHIEIQVLGDGRGGAIHLGERDCSLQRRHQKVWE ESPSPVISAEARARIGGICAKAMQDMSYVGVGTIEFLYEDGEFYFIEMNTRIQVEHPVTEMITGIDLVLEQIRIAAGGDL PVSQDEIVLNGHAIECRINAENPVSFRPSPGKIARYHPPGGLGVRIDSAVFQGYTIPPYYDSLVGKLIVHGKTRGECLMR LRRALDEMVVDGIETTLPLFRALVREPGIIDGDYHIHWLEQYLAGVALEGR
Sequences:
>Translated_451_residues MFDKILIANRGEIALRVLRACKELGIATVAVHSTADADAMHVRLADESVCIGPPPSKDSYLNIPALLAACEITGADAVHP GYGFLSENARFAEILADHNLHFIGPKAEHIRLMGDKIEAKKTARRLGIPVVPGSDGAVGPDDDAMSIAREIGFPVLVKAA AGGGGRGMKVAHTAEDLSMAISTAGNEAKAAFGDASVYLEKYLQKPRHIEIQVLGDGRGGAIHLGERDCSLQRRHQKVWE ESPSPVISAEARARIGGICAKAMQDMSYVGVGTIEFLYEDGEFYFIEMNTRIQVEHPVTEMITGIDLVLEQIRIAAGGDL PVSQDEIVLNGHAIECRINAENPVSFRPSPGKIARYHPPGGLGVRIDSAVFQGYTIPPYYDSLVGKLIVHGKTRGECLMR LRRALDEMVVDGIETTLPLFRALVREPGIIDGDYHIHWLEQYLAGVALEGR >Mature_451_residues MFDKILIANRGEIALRVLRACKELGIATVAVHSTADADAMHVRLADESVCIGPPPSKDSYLNIPALLAACEITGADAVHP GYGFLSENARFAEILADHNLHFIGPKAEHIRLMGDKIEAKKTARRLGIPVVPGSDGAVGPDDDAMSIAREIGFPVLVKAA AGGGGRGMKVAHTAEDLSMAISTAGNEAKAAFGDASVYLEKYLQKPRHIEIQVLGDGRGGAIHLGERDCSLQRRHQKVWE ESPSPVISAEARARIGGICAKAMQDMSYVGVGTIEFLYEDGEFYFIEMNTRIQVEHPVTEMITGIDLVLEQIRIAAGGDL PVSQDEIVLNGHAIECRINAENPVSFRPSPGKIARYHPPGGLGVRIDSAVFQGYTIPPYYDSLVGKLIVHGKTRGECLMR LRRALDEMVVDGIETTLPLFRALVREPGIIDGDYHIHWLEQYLAGVALEGR
Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]
COG id: COG0439
COG function: function code I; Biotin carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotin carboxylation domain [H]
Homologues:
Organism=Homo sapiens, GI189095269, Length=442, Percent_Identity=49.3212669683258, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI65506442, Length=442, Percent_Identity=49.3212669683258, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI295821183, Length=442, Percent_Identity=49.3212669683258, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI116805327, Length=442, Percent_Identity=44.5701357466063, Blast_Score=390, Evalue=1e-108, Organism=Homo sapiens, GI106049528, Length=445, Percent_Identity=44.7191011235955, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI106049295, Length=445, Percent_Identity=44.7191011235955, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI106049292, Length=445, Percent_Identity=44.7191011235955, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI134142062, Length=513, Percent_Identity=29.2397660818713, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI38679960, Length=512, Percent_Identity=28.90625, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI38679971, Length=512, Percent_Identity=28.90625, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI38679974, Length=512, Percent_Identity=28.90625, Blast_Score=222, Evalue=5e-58, Organism=Homo sapiens, GI38679977, Length=512, Percent_Identity=28.90625, Blast_Score=222, Evalue=5e-58, Organism=Homo sapiens, GI38679967, Length=512, Percent_Identity=28.90625, Blast_Score=222, Evalue=5e-58, Organism=Escherichia coli, GI1789654, Length=444, Percent_Identity=61.036036036036, Blast_Score=543, Evalue=1e-156, Organism=Caenorhabditis elegans, GI17567343, Length=442, Percent_Identity=46.3800904977376, Blast_Score=400, Evalue=1e-112, Organism=Caenorhabditis elegans, GI71987519, Length=439, Percent_Identity=43.5079726651481, Blast_Score=366, Evalue=1e-101, Organism=Caenorhabditis elegans, GI17562816, Length=450, Percent_Identity=41.3333333333333, Blast_Score=349, Evalue=2e-96, Organism=Caenorhabditis elegans, GI71997168, Length=507, Percent_Identity=28.7968441814596, Blast_Score=211, Evalue=7e-55, Organism=Caenorhabditis elegans, GI71997163, Length=507, Percent_Identity=28.7968441814596, Blast_Score=211, Evalue=9e-55, Organism=Caenorhabditis elegans, GI133931226, Length=489, Percent_Identity=26.7893660531697, Blast_Score=184, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6319685, Length=427, Percent_Identity=42.1545667447307, Blast_Score=348, Evalue=8e-97, Organism=Saccharomyces cerevisiae, GI6319695, Length=450, Percent_Identity=42, Blast_Score=327, Evalue=2e-90, Organism=Saccharomyces cerevisiae, GI6321376, Length=447, Percent_Identity=41.834451901566, Blast_Score=320, Evalue=3e-88, Organism=Saccharomyces cerevisiae, GI6324343, Length=514, Percent_Identity=30.1556420233463, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6323863, Length=440, Percent_Identity=32.5, Blast_Score=212, Evalue=8e-56, Organism=Drosophila melanogaster, GI281363050, Length=445, Percent_Identity=45.6179775280899, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24652224, Length=445, Percent_Identity=45.6179775280899, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24652222, Length=445, Percent_Identity=45.6179775280899, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24652220, Length=445, Percent_Identity=45.6179775280899, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24652218, Length=445, Percent_Identity=45.6179775280899, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24652212, Length=445, Percent_Identity=45.6179775280899, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24652210, Length=445, Percent_Identity=45.6179775280899, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24652214, Length=445, Percent_Identity=45.6179775280899, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI19921944, Length=445, Percent_Identity=45.6179775280899, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24652216, Length=445, Percent_Identity=45.6179775280899, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24651757, Length=445, Percent_Identity=44.0449438202247, Blast_Score=371, Evalue=1e-103, Organism=Drosophila melanogaster, GI24651759, Length=409, Percent_Identity=42.7872860635697, Blast_Score=331, Evalue=6e-91, Organism=Drosophila melanogaster, GI161076407, Length=507, Percent_Identity=28.5996055226824, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24586460, Length=507, Percent_Identity=28.5996055226824, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI161076409, Length=507, Percent_Identity=28.5996055226824, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24586458, Length=507, Percent_Identity=28.5996055226824, Blast_Score=203, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004549 - InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14; =6.4.1.2 [H]
Molecular weight: Translated: 48806; Mature: 48806
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDKILIANRGEIALRVLRACKELGIATVAVHSTADADAMHVRLADESVCIGPPPSKDSY CCCCEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEECCCCEECCCCCCCCCE LNIPALLAACEITGADAVHPGYGFLSENARFAEILADHNLHFIGPKAEHIRLMGDKIEAK ECHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECCCHHEEEEECCHHHHH KTARRLGIPVVPGSDGAVGPDDDAMSIAREIGFPVLVKAAAGGGGRGMKVAHTAEDLSMA HHHHHCCCEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECHHHHHHH ISTAGNEAKAAFGDASVYLEKYLQKPRHIEIQVLGDGRGGAIHLGERDCSLQRRHQKVWE HHCCCCCCHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHH ESPSPVISAEARARIGGICAKAMQDMSYVGVGTIEFLYEDGEFYFIEMNTRIQVEHPVTE CCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEECCEEEECCCHHH MITGIDLVLEQIRIAAGGDLPVSQDEIVLNGHAIECRINAENPVSFRPSPGKIARYHPPG HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECEEEEEEECCCCCCCCCCCCCCCEEECCCC GLGVRIDSAVFQGYTIPPYYDSLVGKLIVHGKTRGECLMRLRRALDEMVVDGIETTLPLF CCEEEEEHHHHCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH RALVREPGIIDGDYHIHWLEQYLAGVALEGR HHHHHCCCEECCCCHHHHHHHHHHCEECCCC >Mature Secondary Structure MFDKILIANRGEIALRVLRACKELGIATVAVHSTADADAMHVRLADESVCIGPPPSKDSY CCCCEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEECCCCEECCCCCCCCCE LNIPALLAACEITGADAVHPGYGFLSENARFAEILADHNLHFIGPKAEHIRLMGDKIEAK ECHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECCCHHEEEEECCHHHHH KTARRLGIPVVPGSDGAVGPDDDAMSIAREIGFPVLVKAAAGGGGRGMKVAHTAEDLSMA HHHHHCCCEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECHHHHHHH ISTAGNEAKAAFGDASVYLEKYLQKPRHIEIQVLGDGRGGAIHLGERDCSLQRRHQKVWE HHCCCCCCHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHH ESPSPVISAEARARIGGICAKAMQDMSYVGVGTIEFLYEDGEFYFIEMNTRIQVEHPVTE CCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEECCEEEECCCHHH MITGIDLVLEQIRIAAGGDLPVSQDEIVLNGHAIECRINAENPVSFRPSPGKIARYHPPG HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECEEEEEEECCCCCCCCCCCCCCCEEECCCC GLGVRIDSAVFQGYTIPPYYDSLVGKLIVHGKTRGECLMRLRRALDEMVVDGIETTLPLF CCEEEEEHHHHCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH RALVREPGIIDGDYHIHWLEQYLAGVALEGR HHHHHCCCEECCCCHHHHHHHHHHCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7693652; 10984043 [H]