| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is accB [H]
Identifier: 86750136
GI number: 86750136
Start: 3441692
End: 3442204
Strand: Direct
Name: accB [H]
Synonym: RPB_3019
Alternate gene names: 86750136
Gene position: 3441692-3442204 (Clockwise)
Preceding gene: 86750135
Following gene: 86750137
Centisome position: 64.55
GC content: 68.81
Gene sequence:
>513_bases ATGGCCCGCCAGCCTGACACCAAGACCGCCGCCAAGCCGAAGGACGCCGCAACCGAGGACAAGGCGGCGATCGACGACAG CACGCTGATCCGCGATCTCGCGCTGCTGCTCGACGAGACCAACCTCACCGAGATCGAGATCGAGCGCGCCGGGCTTCGCG TCCGCGTCGCCCGCAACGTCAGCATCGCCGCCTCGGTGCCGATGGGCTACGCCCCGACGTCCGCCGCAGGAGGCGCGATC ACTGCGATCGAGACCGCGGCGATCGACATCGCCAAGCATCCTGGCGTGGTGCCCTCGCCGATGGTCGGCACCGTGTATTG GGCACCCGAGCCCGGCGCCAAGCCGTTCATCGAGGTCGGCTCCCGGGTGTCCGCCGGCGAGACGCTGTTCATCATCGAGG CGATGAAGACCATGAACCAGATCCCGTCGCCGCGGGCCGGCACCGTCACCCAGATCCTCGTCGAGGACGGCCAACCGGTC GAGTTCGGCGAGCCGCTGGTGGTGGTCGAATAG
Upstream 100 bases:
>100_bases GGCTGGCCATCCTCGGCCTCGCCGCGAAAATCGGTACCAGCGCCAAGGCCTGACCCGAGGCCGGACCCGCCCCACTCACT CAAGACATCTGGATCGAAAC
Downstream 100 bases:
>100_bases CGAGTCGCGAATGGCGAGTGGCGAATAGAGCTGCATCGCAACGCCATCCGCCCCCCATTCGCCACTCGCCATTTGCAATT CGCCTCTCAATCCGGTGGCC
Product: acetyl-CoA carboxylase, biotin carboxyl carrier protein
Products: Malonyl-CoA; malonyl-CoA; phosphate; ADP [C]
Alternate protein names: BCCP [H]
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MARQPDTKTAAKPKDAATEDKAAIDDSTLIRDLALLLDETNLTEIEIERAGLRVRVARNVSIAASVPMGYAPTSAAGGAI TAIETAAIDIAKHPGVVPSPMVGTVYWAPEPGAKPFIEVGSRVSAGETLFIIEAMKTMNQIPSPRAGTVTQILVEDGQPV EFGEPLVVVE
Sequences:
>Translated_170_residues MARQPDTKTAAKPKDAATEDKAAIDDSTLIRDLALLLDETNLTEIEIERAGLRVRVARNVSIAASVPMGYAPTSAAGGAI TAIETAAIDIAKHPGVVPSPMVGTVYWAPEPGAKPFIEVGSRVSAGETLFIIEAMKTMNQIPSPRAGTVTQILVEDGQPV EFGEPLVVVE >Mature_169_residues ARQPDTKTAAKPKDAATEDKAAIDDSTLIRDLALLLDETNLTEIEIERAGLRVRVARNVSIAASVPMGYAPTSAAGGAIT AIETAAIDIAKHPGVVPSPMVGTVYWAPEPGAKPFIEVGSRVSAGETLFIIEAMKTMNQIPSPRAGTVTQILVEDGQPVE FGEPLVVVE
Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]
COG id: COG0511
COG function: function code I; Biotin carboxyl carrier protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789653, Length=157, Percent_Identity=45.2229299363057, Blast_Score=117, Evalue=6e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001249 - InterPro: IPR001882 - InterPro: IPR000089 - InterPro: IPR011053 [H]
Pfam domain/function: PF00364 Biotin_lipoyl [H]
EC number: NA
Molecular weight: Translated: 17846; Mature: 17714
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARQPDTKTAAKPKDAATEDKAAIDDSTLIRDLALLLDETNLTEIEIERAGLRVRVARNV CCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCE SIAASVPMGYAPTSAAGGAITAIETAAIDIAKHPGVVPSPMVGTVYWAPEPGAKPFIEVG EEEEECCCCCCCCCCCCCEEEEEHHHEEEHHCCCCCCCCCCEEEEEECCCCCCCHHHHHC SRVSAGETLFIIEAMKTMNQIPSPRAGTVTQILVEDGQPVEFGEPLVVVE CCCCCCCEEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEC >Mature Secondary Structure ARQPDTKTAAKPKDAATEDKAAIDDSTLIRDLALLLDETNLTEIEIERAGLRVRVARNV CCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCE SIAASVPMGYAPTSAAGGAITAIETAAIDIAKHPGVVPSPMVGTVYWAPEPGAKPFIEVG EEEEECCCCCCCCCCCCCEEEEEHHHEEEHHCCCCCCCCCCEEEEEECCCCCCCHHHHHC SRVSAGETLFIIEAMKTMNQIPSPRAGTVTQILVEDGQPVEFGEPLVVVE CCCCCCCEEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acetyl-CoA; HCO3-; Proton; acetyl-CoA; ATP [C]
Specific reaction: acetyl-CoA = malonyl-CoA HCO3- + Proton + acetyl-CoA + ATP = malonyl-CoA + phosphate + ADP [C]
General reaction: Ligases; Forming Carbon-Carbon Bonds; acetyl-CoA carboxylase Reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]