Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86750077
Identifier: 86750077
GI number: 86750077
Start: 3370404
End: 3370694
Strand: Direct
Name: 86750077
Synonym: RPB_2960
Alternate gene names: NA
Gene position: 3370404-3370694 (Clockwise)
Preceding gene: 86750076
Following gene: 86750086
Centisome position: 63.21
GC content: 65.98
Gene sequence:
>291_bases GTGACCGATGTGCGCCCGCAGGCCGAGACCTTTCAGGCCCCGCTCGACGAGATCGTCTGGAACACCGCCTTCCGCCGCGG CTTCGCCGAAGCCCGCTCCGGGCGCTTGCCGAAATTCGACGACGAGCTGATGTTTCAGGACGGTCTCGCCTGGGTCTACG AATGGGGCCGCCAGTTCGCCATCCTCGCCCCGCCTGATTTGCCGCTGGTGCTGCCCGACGAAGGCGCGCTCAACCCGAAA GCCGTCGAGCTGTTCCGCGAGATGGTGATGCAGGGCGAGATCTGTACGTAG
Upstream 100 bases:
>100_bases CCGTGACAAAATCCGCCAAAAGTCCGGGTGCGGATCGCCGGCCGCCGTGGGATAATACCCGCCTTCGCCCTCATTGCTGG ATGTGTCGCAGGATCGTGCC
Downstream 100 bases:
>100_bases GTTCGCGCCGGCCCGGCTCGTCAAGAAGACGTCGCCGGACTCGCGTCCGGCGACGTGTTCGTTGAATGACTTGCCGGTGT CGGCCGAGCGCTCAGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MTDVRPQAETFQAPLDEIVWNTAFRRGFAEARSGRLPKFDDELMFQDGLAWVYEWGRQFAILAPPDLPLVLPDEGALNPK AVELFREMVMQGEICT
Sequences:
>Translated_96_residues MTDVRPQAETFQAPLDEIVWNTAFRRGFAEARSGRLPKFDDELMFQDGLAWVYEWGRQFAILAPPDLPLVLPDEGALNPK AVELFREMVMQGEICT >Mature_95_residues TDVRPQAETFQAPLDEIVWNTAFRRGFAEARSGRLPKFDDELMFQDGLAWVYEWGRQFAILAPPDLPLVLPDEGALNPKA VELFREMVMQGEICT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10972; Mature: 10840
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVRPQAETFQAPLDEIVWNTAFRRGFAEARSGRLPKFDDELMFQDGLAWVYEWGRQFA CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEE ILAPPDLPLVLPDEGALNPKAVELFREMVMQGEICT EECCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TDVRPQAETFQAPLDEIVWNTAFRRGFAEARSGRLPKFDDELMFQDGLAWVYEWGRQFA CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEE ILAPPDLPLVLPDEGALNPKAVELFREMVMQGEICT EECCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA