Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749976
Identifier: 86749976
GI number: 86749976
Start: 3259503
End: 3260105
Strand: Direct
Name: 86749976
Synonym: RPB_2859
Alternate gene names: NA
Gene position: 3259503-3260105 (Clockwise)
Preceding gene: 86749974
Following gene: 86749977
Centisome position: 61.13
GC content: 69.32
Gene sequence:
>603_bases ATGCGACGAGTATTCCTTGAGTTCCAGAACGCGCTGTGGCGTGGCCTGGCCGCGACCGGACTTGCCCTGCTGATCGGCAT CGGCGGCGCGATCGCCCAGAGCGGTGACCTGCGCGCCCAGGATCAGAACAACAAGCCCGCGACCAATGCCAATCAGCCGG CGCAGGCTCCTGCCGATGCCCTCAAGGAAAGCCAGCGCAAGACCGACGAGTTCGTCGAGGCCGCGCAAGCGATCAACGGG CCTGCCGGCAACCCGGAATGCGTCTGGCTCGGTCGCCGCGTCGTGGTGCTGATGTGGCGCGACGACCTCGACACCGCGTT CCGCCACCTCGATCTGTATGACCGCTTCGGTTGCCCGACCGGCCATATCCAGGCCTCGTTCCGCTGCCTGGTCCGCTCCG GCCCGATCGATCCGAAGGTGCCGGAAGGCCTGAGCGGACGCGTCCACGCCTGCTGGATCAATCCCAATGCGCAGCCTCAG CCGGCCGCGGCGGCGGCTCCGGCGACACCGTCCGGAAAGCCGGCGGCGAACCCGCAGCCTGCTGCGCCGGCAACGCCGGC ACCGGCGCCGGGTCAGGCCCCATCCCCTGCGCCGGCCAAATAA
Upstream 100 bases:
>100_bases AAATCGTGCAGGGTCAGGCTGTATTCGGCGCAAATTCGGTAGCGTCGGGGCGGATGGGGATCGAGGCCGTTGTGATCCTG CCAACCAGATCGGGGACGCT
Downstream 100 bases:
>100_bases GCCGGCGCAGTCGGAACGTTCTGATATTTTCGCGGTTGGCGTGCGTTCGCCCTTAAATCGCCACGGCGGCGTATGAATTG ATCGCCGACGGGGCTCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MRRVFLEFQNALWRGLAATGLALLIGIGGAIAQSGDLRAQDQNNKPATNANQPAQAPADALKESQRKTDEFVEAAQAING PAGNPECVWLGRRVVVLMWRDDLDTAFRHLDLYDRFGCPTGHIQASFRCLVRSGPIDPKVPEGLSGRVHACWINPNAQPQ PAAAAAPATPSGKPAANPQPAAPATPAPAPGQAPSPAPAK
Sequences:
>Translated_200_residues MRRVFLEFQNALWRGLAATGLALLIGIGGAIAQSGDLRAQDQNNKPATNANQPAQAPADALKESQRKTDEFVEAAQAING PAGNPECVWLGRRVVVLMWRDDLDTAFRHLDLYDRFGCPTGHIQASFRCLVRSGPIDPKVPEGLSGRVHACWINPNAQPQ PAAAAAPATPSGKPAANPQPAAPATPAPAPGQAPSPAPAK >Mature_200_residues MRRVFLEFQNALWRGLAATGLALLIGIGGAIAQSGDLRAQDQNNKPATNANQPAQAPADALKESQRKTDEFVEAAQAING PAGNPECVWLGRRVVVLMWRDDLDTAFRHLDLYDRFGCPTGHIQASFRCLVRSGPIDPKVPEGLSGRVHACWINPNAQPQ PAAAAAPATPSGKPAANPQPAAPATPAPAPGQAPSPAPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21000; Mature: 21000
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVFLEFQNALWRGLAATGLALLIGIGGAIAQSGDLRAQDQNNKPATNANQPAQAPADA CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH LKESQRKTDEFVEAAQAINGPAGNPECVWLGRRVVVLMWRDDLDTAFRHLDLYDRFGCPT HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCCC GHIQASFRCLVRSGPIDPKVPEGLSGRVHACWINPNAQPQPAAAAAPATPSGKPAANPQP CHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC AAPATPAPAPGQAPSPAPAK CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRVFLEFQNALWRGLAATGLALLIGIGGAIAQSGDLRAQDQNNKPATNANQPAQAPADA CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH LKESQRKTDEFVEAAQAINGPAGNPECVWLGRRVVVLMWRDDLDTAFRHLDLYDRFGCPT HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCCC GHIQASFRCLVRSGPIDPKVPEGLSGRVHACWINPNAQPQPAAAAAPATPSGKPAANPQP CHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC AAPATPAPAPGQAPSPAPAK CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA