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The map label for this gene is hspC2 [H]

Identifier: 86749919

GI number: 86749919

Start: 3194451

End: 3194954

Strand: Direct

Name: hspC2 [H]

Synonym: RPB_2802

Alternate gene names: 86749919

Gene position: 3194451-3194954 (Clockwise)

Preceding gene: 86749917

Following gene: 86749920

Centisome position: 59.91

GC content: 63.89

Gene sequence:

>504_bases
ATGAACATGCGCGGCATGATCCCCTGGGGCCGGAACAACCAACCGCTGGCACGGGCATTCGACAGCGATCCCTTCCTGTC
GCTGCACCGCGAAATGAACCGTCTGTTCGACGACGTGTTCCGCGGCTTCGACGCGACGCCGGCGCTGTCGAACCGCTTGG
CGGCCTTCGGCAACGCCTGGCCCAAGCTCGAAATCGCCGACACCGACAAGGAACTGAAAGTGGCGGCCGAGATCCCCGGC
ATGGAGGAGAAGGACATCGAGGTTCTGCTCGACGACGGCGCGCTCACGATCCGCGGCGAAAAGATCTCGACCACCGAGGA
CAAGACCAGGCAGTTCAGCGAGCACTTCTACGGCAAGTTCGAACGCCGCATTCCGCTCGACGTCCCGGTCGCCGCCGACA
AGGTCGCCGCGGCCTTCAAGAACGGCGTCCTTACGGTGACGCTGCCGAAACTGGAACCGGTCCCGGGCACCTCGAAGCGG
ATTGCGATCCAGCCCGGCAAATAA

Upstream 100 bases:

>100_bases
GCGCGCCCGCGACGGCGCGGGTGCGCCTCGGACATCGGCGCGTAGTTCGGCGCTGATCGTTCGAGACTGGATGGATCAAC
ACTGGAGTGAGGAGGCATCC

Downstream 100 bases:

>100_bases
GCCGGCAAGCAACGGTTAACTGTGCGACGTCGCGCCCGGGTGCGAATGGCCGCACCCGGGACGGCGCTGGATGATCGTGA
CCCAAGATTTGTGACCCAAG

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MNMRGMIPWGRNNQPLARAFDSDPFLSLHREMNRLFDDVFRGFDATPALSNRLAAFGNAWPKLEIADTDKELKVAAEIPG
MEEKDIEVLLDDGALTIRGEKISTTEDKTRQFSEHFYGKFERRIPLDVPVAADKVAAAFKNGVLTVTLPKLEPVPGTSKR
IAIQPGK

Sequences:

>Translated_167_residues
MNMRGMIPWGRNNQPLARAFDSDPFLSLHREMNRLFDDVFRGFDATPALSNRLAAFGNAWPKLEIADTDKELKVAAEIPG
MEEKDIEVLLDDGALTIRGEKISTTEDKTRQFSEHFYGKFERRIPLDVPVAADKVAAAFKNGVLTVTLPKLEPVPGTSKR
IAIQPGK
>Mature_167_residues
MNMRGMIPWGRNNQPLARAFDSDPFLSLHREMNRLFDDVFRGFDATPALSNRLAAFGNAWPKLEIADTDKELKVAAEIPG
MEEKDIEVLLDDGALTIRGEKISTTEDKTRQFSEHFYGKFERRIPLDVPVAADKVAAAFKNGVLTVTLPKLEPVPGTSKR
IAIQPGK

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 18639; Mature: 18639

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMRGMIPWGRNNQPLARAFDSDPFLSLHREMNRLFDDVFRGFDATPALSNRLAAFGNAW
CCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
PKLEIADTDKELKVAAEIPGMEEKDIEVLLDDGALTIRGEKISTTEDKTRQFSEHFYGKF
CEEEEECCCCCEEEEECCCCCCCCCEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHH
ERRIPLDVPVAADKVAAAFKNGVLTVTLPKLEPVPGTSKRIAIQPGK
HCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECCCC
>Mature Secondary Structure
MNMRGMIPWGRNNQPLARAFDSDPFLSLHREMNRLFDDVFRGFDATPALSNRLAAFGNAW
CCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
PKLEIADTDKELKVAAEIPGMEEKDIEVLLDDGALTIRGEKISTTEDKTRQFSEHFYGKF
CEEEEECCCCCEEEEECCCCCCCCCEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHH
ERRIPLDVPVAADKVAAAFKNGVLTVTLPKLEPVPGTSKRIAIQPGK
HCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA