| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is livK [C]
Identifier: 86749876
GI number: 86749876
Start: 3146779
End: 3148131
Strand: Direct
Name: livK [C]
Synonym: RPB_2759
Alternate gene names: 86749876
Gene position: 3146779-3148131 (Clockwise)
Preceding gene: 86749875
Following gene: 86749877
Centisome position: 59.02
GC content: 63.19
Gene sequence:
>1353_bases ATGGCCAACGACAAGCTCATCATCAATCGTAGAACTGCACTCAAGACCGGGCTTGCCGGCGCGGCCGCGCTGGCAACGCC GACGTTCTTCATCCGCGACGCCTGGGCCGACGACTTCTGCAACATGCCCAAGGGCAAGGAAGTCACGTTCGGCTTCAACG TGCCGCAGTCCGGCGCCTATGCCGATGAAGGCATGGATGAACTCAAGGCCTATCAGCTCGCCGTCAAGCACCTCAATGGT GAGGGCGATGGCGGCATGCTCAAGACCATGAAGCCGCTGGCGCTGAAGGGCAACGGCGTGCTCGGCAAGAAGGTCGCCTA CGTCTCCGGCGACACCCAGACGAAGGCCGATCAGGCGCGCGCCACCGCCAAGCGCATGATCGAGAAGGACGGCGCGATCA TGATCACCGGCGGCTCGTCGTCGGCCGAAGCGGTCGCGGTGCAATCGCTGTGTCAGGACGTCGGCGTGATCTTCATGGCC GGCCTCACCCACTCCAACGACACCACCGGCAAGGACAAGCGCGCCTACGGCTTCCGCCACTTCTTCAACGCCTATATGTC GGGCGTGGCGCTTGGACCGGTGCTCTCCGAAGCCTATGGCAAGGACCGCGCCGCCTATCACCTGACCGCCGACTACACCT GGGGCTGGACCCAGGAAGAGTCGATGAAGGATGCGACCGAAAAGCAGGGCTGGAAGACGGTCAAGGCCGTCCGCACCCCG CTCGGCGCTGCCGACTTCTCGCAGTACATCACCCCGGTGCTGAATTCCGGCGCCGACGTGCTGATCCTGAACCACTACGG CAAGGACATGATCAACTCCTTGACCCAGGCGGTGCAGTTCGGCCTGCGCGACAAGATGGCGAACGGCAAGAAGTTTGAAA TCGTCGTTCCGCTGTTCTCTGAACTGATGGCGCAAGGCGCCGGCGATGCGATCAAGGGCATCTACGGCACCGCCAATTGG GACTGGAAGCTGGAAGACGCAGCGACCAGCGCCTTCACCAAGTCGTTCGGTGCGGCCTATGGCACGCCGCCGTCGCAGGC CGCCCAGACCTGCTACGTTCAGGCGATCCTCTACGCCGACGCCTGCGAGCGTGCCGGCAGTTTCAACCCGTCTGCCGTGA TCAAGGCGCTGGAAGGCTTCGAGTTCGACGGCATGGGCAACGGCAAGACGCTGTACCGCGCCGCCGACCATCAGTGCTTC AAGGACGTGCTGGTGGTGCAGGGCAAGGACAAGCCGAAGGACAAGTTCGACCTGCTCGAGGTCCGGAAGATCGTGCCGGC GTCTCAGGTCACCTATGACCCGAGCATCTTCGGCGGCGAACTCGGCTCCAAGGACGCCAAGAAGTGCGGATAA
Upstream 100 bases:
>100_bases ACATGCCTCCAGAAGCGACCAAAGCTCTGGCCGAACGATCTCGCATGTGTGGGAGCGACGGTAACAAGAAGCGCTGATGT TGAAACGCCGAGGAGGAAAC
Downstream 100 bases:
>100_bases TCTGACCCTGTCGGATTTGCCGCAAGCAATTCGGTAGGCCTGGACTCCTATTCCGGTCGGTTGCGTTCTGGCGACGCAGC CGGCCGGCTGTGTCTTGCGA
Product: twin-arginine translocation pathway signal
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: UreA/Short-Chain Amide ABC Transporter; ABC-Type Transporter Periplasmic Component; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; Tat Pathway Signal Sequence Domain-Containing Protein; ABC Transporter; Tat Pathway Signal Sequence Domain Protein; Amino Acid ABC Transporter Periplasmic Protein; Inner-Membrane Translocator; ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MANDKLIINRRTALKTGLAGAAALATPTFFIRDAWADDFCNMPKGKEVTFGFNVPQSGAYADEGMDELKAYQLAVKHLNG EGDGGMLKTMKPLALKGNGVLGKKVAYVSGDTQTKADQARATAKRMIEKDGAIMITGGSSSAEAVAVQSLCQDVGVIFMA GLTHSNDTTGKDKRAYGFRHFFNAYMSGVALGPVLSEAYGKDRAAYHLTADYTWGWTQEESMKDATEKQGWKTVKAVRTP LGAADFSQYITPVLNSGADVLILNHYGKDMINSLTQAVQFGLRDKMANGKKFEIVVPLFSELMAQGAGDAIKGIYGTANW DWKLEDAATSAFTKSFGAAYGTPPSQAAQTCYVQAILYADACERAGSFNPSAVIKALEGFEFDGMGNGKTLYRAADHQCF KDVLVVQGKDKPKDKFDLLEVRKIVPASQVTYDPSIFGGELGSKDAKKCG
Sequences:
>Translated_450_residues MANDKLIINRRTALKTGLAGAAALATPTFFIRDAWADDFCNMPKGKEVTFGFNVPQSGAYADEGMDELKAYQLAVKHLNG EGDGGMLKTMKPLALKGNGVLGKKVAYVSGDTQTKADQARATAKRMIEKDGAIMITGGSSSAEAVAVQSLCQDVGVIFMA GLTHSNDTTGKDKRAYGFRHFFNAYMSGVALGPVLSEAYGKDRAAYHLTADYTWGWTQEESMKDATEKQGWKTVKAVRTP LGAADFSQYITPVLNSGADVLILNHYGKDMINSLTQAVQFGLRDKMANGKKFEIVVPLFSELMAQGAGDAIKGIYGTANW DWKLEDAATSAFTKSFGAAYGTPPSQAAQTCYVQAILYADACERAGSFNPSAVIKALEGFEFDGMGNGKTLYRAADHQCF KDVLVVQGKDKPKDKFDLLEVRKIVPASQVTYDPSIFGGELGSKDAKKCG >Mature_449_residues ANDKLIINRRTALKTGLAGAAALATPTFFIRDAWADDFCNMPKGKEVTFGFNVPQSGAYADEGMDELKAYQLAVKHLNGE GDGGMLKTMKPLALKGNGVLGKKVAYVSGDTQTKADQARATAKRMIEKDGAIMITGGSSSAEAVAVQSLCQDVGVIFMAG LTHSNDTTGKDKRAYGFRHFFNAYMSGVALGPVLSEAYGKDRAAYHLTADYTWGWTQEESMKDATEKQGWKTVKAVRTPL GAADFSQYITPVLNSGADVLILNHYGKDMINSLTQAVQFGLRDKMANGKKFEIVVPLFSELMAQGAGDAIKGIYGTANWD WKLEDAATSAFTKSFGAAYGTPPSQAAQTCYVQAILYADACERAGSFNPSAVIKALEGFEFDGMGNGKTLYRAADHQCFK DVLVVQGKDKPKDKFDLLEVRKIVPASQVTYDPSIFGGELGSKDAKKCG
Specific function: This Protein Is A Component Of The Leucine-Specific Transport System, Which Is One Of The Two Periplasmic Binding Protein-Dependent Transport Systems Of The High-Affinity Transport Of The Branched-Chain Amino Acids In E.Coli. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48372; Mature: 48241
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANDKLIINRRTALKTGLAGAAALATPTFFIRDAWADDFCNMPKGKEVTFGFNVPQSGAY CCCCCEEEECHHHHHHCCCCHHHHHCCHHEEECCCHHHHHCCCCCCEEEEECCCCCCCCC ADEGMDELKAYQLAVKHLNGEGDGGMLKTMKPLALKGNGVLGKKVAYVSGDTQTKADQAR HHCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEECCCCCCCCEEEEECCCCCHHHHHHH ATAKRMIEKDGAIMITGGSSSAEAVAVQSLCQDVGVIFMAGLTHSNDTTGKDKRAYGFRH HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCHHHHHHHH FFNAYMSGVALGPVLSEAYGKDRAAYHLTADYTWGWTQEESMKDATEKQGWKTVKAVRTP HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC LGAADFSQYITPVLNSGADVLILNHYGKDMINSLTQAVQFGLRDKMANGKKFEIVVPLFS CCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH ELMAQGAGDAIKGIYGTANWDWKLEDAATSAFTKSFGAAYGTPPSQAAQTCYVQAILYAD HHHHCCCCCHHHCCEECCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH ACERAGSFNPSAVIKALEGFEFDGMGNGKTLYRAADHQCFKDVLVVQGKDKPKDKFDLLE HHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHEECCCCCCCHHHHHHH VRKIVPASQVTYDPSIFGGELGSKDAKKCG HHHHCCCCCEECCCCCCCCCCCCCCHHHCC >Mature Secondary Structure ANDKLIINRRTALKTGLAGAAALATPTFFIRDAWADDFCNMPKGKEVTFGFNVPQSGAY CCCCEEEECHHHHHHCCCCHHHHHCCHHEEECCCHHHHHCCCCCCEEEEECCCCCCCCC ADEGMDELKAYQLAVKHLNGEGDGGMLKTMKPLALKGNGVLGKKVAYVSGDTQTKADQAR HHCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEECCCCCCCCEEEEECCCCCHHHHHHH ATAKRMIEKDGAIMITGGSSSAEAVAVQSLCQDVGVIFMAGLTHSNDTTGKDKRAYGFRH HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCHHHHHHHH FFNAYMSGVALGPVLSEAYGKDRAAYHLTADYTWGWTQEESMKDATEKQGWKTVKAVRTP HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC LGAADFSQYITPVLNSGADVLILNHYGKDMINSLTQAVQFGLRDKMANGKKFEIVVPLFS CCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH ELMAQGAGDAIKGIYGTANWDWKLEDAATSAFTKSFGAAYGTPPSQAAQTCYVQAILYAD HHHHCCCCCHHHCCEECCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH ACERAGSFNPSAVIKALEGFEFDGMGNGKTLYRAADHQCFKDVLVVQGKDKPKDKFDLLE HHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHEECCCCCCCHHHHHHH VRKIVPASQVTYDPSIFGGELGSKDAKKCG HHHHCCCCCEECCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA