| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749855
Identifier: 86749855
GI number: 86749855
Start: 3123168
End: 3123539
Strand: Direct
Name: 86749855
Synonym: RPB_2738
Alternate gene names: NA
Gene position: 3123168-3123539 (Clockwise)
Preceding gene: 86749852
Following gene: 86749857
Centisome position: 58.58
GC content: 64.52
Gene sequence:
>372_bases ATGACGATCGACAAGCCGGCCCGCACCGTCTTCCTGGTTGAAGACGAGGCGATGATCAGGATGATGGTCGTCGACATGCT GGAGGAGCTCGGCTTCAGCGTCGCCGCCGAAACCGGCGAGATCAACGAAGCCGTCAAGCTCGCCGGCACGACCGATTTCG ACGTCGCGATTCTCGACGTCAACGTCAACGGCAAGGTGATCTCGCCGGTTGCCGACGTGCTGAAGGCGCGCAACCGCCCC TTCATCTTCGCCACCGGCTACGGCACCCAGGGCGTGCCGGAAGACTATCGCGACCGCCCGGCGCTGCAGAAGCCGTTCCA GATCGAATCGCTCAAGCAGGCCCTCGACACCACCCTGCGCGGCACGGCGTAG
Upstream 100 bases:
>100_bases ATGTCGCAGCGGCAGGTTGCGATTGCTTTGCCCTGTGGTTTTTGCGAGTTTACAATCGCGACGCCAGCCCAGATTGCGGG CGGCTCCAAGGGGATACCCA
Downstream 100 bases:
>100_bases TTCTCGCGCATCAGCGCATTCGTCGTCATCCTGAGGTGCTCGCCGCATCGCGGCGAGCCTCGAAGGATGGGCCGCAGACA CCGTCCGCGTCGCTGTCATC
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: Response Regulator Receiver; Signal Transduction Histidine Kinase; Response Regulator Receiver Domain-Containing Protein; Two-Component Response Regulator; Two-Component System Regulatory Protein; Response Regulator; Two-Component Response Regulator Protein; PAS/PAC Sensor Protein; Response Regulator Receiver Modulated GAF Sensor Protein; PAS-Family Sensor Histidine Kinase/Receiver Protein; Histidine Kinase; Response Regulator Receiver/SARP Domain-Containing Protein; Response Regulator Recevier Domain Protein; Two-Component Receiver Domain-Containing Protein; Phytochrome Protein; Crp/Fnr Family Transcriptional Regulator; CheY-Like Response Regulator; Response Regulator Receiver And SARP Domain Protein; Phytochrome/Sensor Histidine Kinase; Two Component Response Regulator; Bacteriophytochrome Protein; PAS-Family Sensor Histidine Kinase
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MTIDKPARTVFLVEDEAMIRMMVVDMLEELGFSVAAETGEINEAVKLAGTTDFDVAILDVNVNGKVISPVADVLKARNRP FIFATGYGTQGVPEDYRDRPALQKPFQIESLKQALDTTLRGTA
Sequences:
>Translated_123_residues MTIDKPARTVFLVEDEAMIRMMVVDMLEELGFSVAAETGEINEAVKLAGTTDFDVAILDVNVNGKVISPVADVLKARNRP FIFATGYGTQGVPEDYRDRPALQKPFQIESLKQALDTTLRGTA >Mature_122_residues TIDKPARTVFLVEDEAMIRMMVVDMLEELGFSVAAETGEINEAVKLAGTTDFDVAILDVNVNGKVISPVADVLKARNRPF IFATGYGTQGVPEDYRDRPALQKPFQIESLKQALDTTLRGTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13476; Mature: 13344
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDKPARTVFLVEDEAMIRMMVVDMLEELGFSVAAETGEINEAVKLAGTTDFDVAILDV CCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEECCCCCCCHHEEECCCCCCEEEEEEE NVNGKVISPVADVLKARNRPFIFATGYGTQGVPEDYRDRPALQKPFQIESLKQALDTTLR CCCCEEEHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC GTA CCC >Mature Secondary Structure TIDKPARTVFLVEDEAMIRMMVVDMLEELGFSVAAETGEINEAVKLAGTTDFDVAILDV CCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEECCCCCCCHHEEECCCCCCEEEEEEE NVNGKVISPVADVLKARNRPFIFATGYGTQGVPEDYRDRPALQKPFQIESLKQALDTTLR CCCCEEEHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC GTA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA