| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749835
Identifier: 86749835
GI number: 86749835
Start: 3104925
End: 3105293
Strand: Direct
Name: 86749835
Synonym: RPB_2718
Alternate gene names: NA
Gene position: 3104925-3105293 (Clockwise)
Preceding gene: 86749832
Following gene: 86749837
Centisome position: 58.24
GC content: 68.56
Gene sequence:
>369_bases ATGACCCGCCTCACCGCCCTCACGCTCGCAATCACCCTCGCGCTGCTTCCCCTCGCCGCCTCGGCGGCTTCGCCCAAGAA GCACGCCAAGCGGGCACAGAGCAGCGGCCTGCCCGGCTATGTGCAGCCGCCGAGCAATTCGGTGCCGCTGTTCATGCAGA AGCTGTCCCGCCCGCAGCGGGCGATGCTGCGGCCGAAGCGGCCGTGGTACATCGATCCAACGCCGGAATATTATCGCTGG AACGGCGGCTGGTCCGGCGAATGGCGCTATCTCGGCCGGCCGGGCTTCTACCGCGGCCGCTACAATGGCGGCAGCTTCGG GCCTTGCTGGACGCAGACGCCGATCGGGCCGGTGTGGAATTGCGGCTGA
Upstream 100 bases:
>100_bases CCACTTCGATGAAGCGAGCGACATCTATAGATGCCGCGTGTGGCCCCGTCACACCCGAATTTGAATCGCCCTCCCGCCCC CACCCGTCTACACTCCCCCC
Downstream 100 bases:
>100_bases GGCCGGTCCACAGTCTCTCAGTCGTCGGTGCGTAGCTCACGCATCCGCTTGCGCCGCCCGGATGTCGTCCGCCGTCAGCC GCGGATGCTCGGCGACGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MTRLTALTLAITLALLPLAASAASPKKHAKRAQSSGLPGYVQPPSNSVPLFMQKLSRPQRAMLRPKRPWYIDPTPEYYRW NGGWSGEWRYLGRPGFYRGRYNGGSFGPCWTQTPIGPVWNCG
Sequences:
>Translated_122_residues MTRLTALTLAITLALLPLAASAASPKKHAKRAQSSGLPGYVQPPSNSVPLFMQKLSRPQRAMLRPKRPWYIDPTPEYYRW NGGWSGEWRYLGRPGFYRGRYNGGSFGPCWTQTPIGPVWNCG >Mature_121_residues TRLTALTLAITLALLPLAASAASPKKHAKRAQSSGLPGYVQPPSNSVPLFMQKLSRPQRAMLRPKRPWYIDPTPEYYRWN GGWSGEWRYLGRPGFYRGRYNGGSFGPCWTQTPIGPVWNCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13681; Mature: 13550
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLTALTLAITLALLPLAASAASPKKHAKRAQSSGLPGYVQPPSNSVPLFMQKLSRPQR CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEECCCCCCCCHHHHHCCCCHH AMLRPKRPWYIDPTPEYYRWNGGWSGEWRYLGRPGFYRGRYNGGSFGPCWTQTPIGPVWN HHCCCCCCEEECCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CG CC >Mature Secondary Structure TRLTALTLAITLALLPLAASAASPKKHAKRAQSSGLPGYVQPPSNSVPLFMQKLSRPQR CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEECCCCCCCCHHHHHCCCCHH AMLRPKRPWYIDPTPEYYRWNGGWSGEWRYLGRPGFYRGRYNGGSFGPCWTQTPIGPVWN HHCCCCCCEEECCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA