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The map label for this gene is ytfL [C]

Identifier: 86749828

GI number: 86749828

Start: 3095799

End: 3097094

Strand: Direct

Name: ytfL [C]

Synonym: RPB_2711

Alternate gene names: 86749828

Gene position: 3095799-3097094 (Clockwise)

Preceding gene: 86749827

Following gene: 86749829

Centisome position: 58.06

GC content: 66.82

Gene sequence:

>1296_bases
ATGTTATCGGTAGAATTGGCAATCGTTGTGGGACTGATCGTCGCCAACGGATTGCTTTCGATGTCCGAGCTGGCGATTGT
GTCGTCCCGCCCGGCCAGGCTGGCGCTGCTGGCTCAAAAAAAGGTCCGCGGCGCCCGGCAGGCGATGGTGCTGGCCGACG
ATCCCGGCAAGTTCCTGTCGACAGTCCAGATCGGCATCACGCTGGTCGGTGTGTTGTCCGGCGCGTTCTCGGGCGCGACG
CTGGGCCAACGCCTGAGCGAATGGCTGGCCGAGCTCGCCGTTCCGTTTCCCGACATCATCGGCTTCGGCCTGGTGGTGAC
GCTGATCACCTATGCGACGTTGATCGTCGGCGAACTGGTGCCGAAGCAGGTCGCGCTGCGCGACCCCGAAGCCGTCGCCG
TCAAGGTCGCCCCGGCGATGACGGTGATCGCCAAGGTGTCACGGCCGGTGGTGTTCATCCTCGATCTGTCCGGCAAGGCC
ATTCTGAAACTGCTGGGCCAGGGCGGCGCGGCGGAGGAGAAGATTTCCGAGGAAGAGATCCACAATCTGGTGATGGAAGC
GGAAACCGCCGGCGTGCTCGAACCCGGCGAGCGCGAGATGATCGCCGGGGTGATGCGGCTCGGCGACCGGCCGGTCGGCG
CGGTGATGACGCCGCGGCCGGAGGTGGATTCGGTCGATCTCGCCGATCCGCCCGAGACGATCCGCGAGGCTTTTCTCGGC
AGCCCGCACTCCCGCCTGCCGGTGACCGACGGCAATCGCGACGACCCGATCGGGATCATCCAGGCCAAGGACATGCTCGA
GGTCTATCTGCGCGGCGACAAGCCGGACCTGCGCGCGCTGGTGCGCGACGCGCCGGTGATTCCGTCGTCCGCCGACGCCC
GCGACGTGCTCGCCACGCTGCGGAAATCGTCGGTGCACATGGCGCTGGTCTATGACGAGTTCGGCGCCTTCGAGGGCGTC
GTCACCACCGCCGATATTCTCGAATCGATCGTCGGCGCGTTCGGGTCCGAGGACGGCCCGGCGGAGCCCGCCGCGGTGCG
CCGCGAGGACGGCTCGTATCTGATCGCGGGCTGGATGCCGGTCGACGAATTCGGCGATCTGTTGCCGGTGCCGATCCCGG
AGCACCGCGACTACCACACCGTCGCGGGCCTTATTTTGCAGCATTTCGGCGCGTTGCCGGCGGTCGGCGACCGATTCGAC
TATCAGGGCTGGCGAATCGAGATTCTCGACTTGGACGGGCGGCGGATCGACAAGATCATGGCGACGCGGAGCGCCGACGC
GGAGACGGCGGCGTGA

Upstream 100 bases:

>100_bases
CACCGCAACCCAAAGATAAACCCGCCCCTGGTTCCTTTGAGGGCACCGGCATCCTATCTGTTGAGCTCGTGTCAACAGCA
GAGGGGGCGGCGCTGGCGCC

Downstream 100 bases:

>100_bases
CGACCCCGCCGATCGCCGGCACGGCCGACGGCCGCGCCCGGGCGCTGATCGCGGTGCGCGCGGCGCACACCGTGATCTGG
GCGTTCTTCGCCAGTTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MLSVELAIVVGLIVANGLLSMSELAIVSSRPARLALLAQKKVRGARQAMVLADDPGKFLSTVQIGITLVGVLSGAFSGAT
LGQRLSEWLAELAVPFPDIIGFGLVVTLITYATLIVGELVPKQVALRDPEAVAVKVAPAMTVIAKVSRPVVFILDLSGKA
ILKLLGQGGAAEEKISEEEIHNLVMEAETAGVLEPGEREMIAGVMRLGDRPVGAVMTPRPEVDSVDLADPPETIREAFLG
SPHSRLPVTDGNRDDPIGIIQAKDMLEVYLRGDKPDLRALVRDAPVIPSSADARDVLATLRKSSVHMALVYDEFGAFEGV
VTTADILESIVGAFGSEDGPAEPAAVRREDGSYLIAGWMPVDEFGDLLPVPIPEHRDYHTVAGLILQHFGALPAVGDRFD
YQGWRIEILDLDGRRIDKIMATRSADAETAA

Sequences:

>Translated_431_residues
MLSVELAIVVGLIVANGLLSMSELAIVSSRPARLALLAQKKVRGARQAMVLADDPGKFLSTVQIGITLVGVLSGAFSGAT
LGQRLSEWLAELAVPFPDIIGFGLVVTLITYATLIVGELVPKQVALRDPEAVAVKVAPAMTVIAKVSRPVVFILDLSGKA
ILKLLGQGGAAEEKISEEEIHNLVMEAETAGVLEPGEREMIAGVMRLGDRPVGAVMTPRPEVDSVDLADPPETIREAFLG
SPHSRLPVTDGNRDDPIGIIQAKDMLEVYLRGDKPDLRALVRDAPVIPSSADARDVLATLRKSSVHMALVYDEFGAFEGV
VTTADILESIVGAFGSEDGPAEPAAVRREDGSYLIAGWMPVDEFGDLLPVPIPEHRDYHTVAGLILQHFGALPAVGDRFD
YQGWRIEILDLDGRRIDKIMATRSADAETAA
>Mature_431_residues
MLSVELAIVVGLIVANGLLSMSELAIVSSRPARLALLAQKKVRGARQAMVLADDPGKFLSTVQIGITLVGVLSGAFSGAT
LGQRLSEWLAELAVPFPDIIGFGLVVTLITYATLIVGELVPKQVALRDPEAVAVKVAPAMTVIAKVSRPVVFILDLSGKA
ILKLLGQGGAAEEKISEEEIHNLVMEAETAGVLEPGEREMIAGVMRLGDRPVGAVMTPRPEVDSVDLADPPETIREAFLG
SPHSRLPVTDGNRDDPIGIIQAKDMLEVYLRGDKPDLRALVRDAPVIPSSADARDVLATLRKSSVHMALVYDEFGAFEGV
VTTADILESIVGAFGSEDGPAEPAAVRREDGSYLIAGWMPVDEFGDLLPVPIPEHRDYHTVAGLILQHFGALPAVGDRFD
YQGWRIEILDLDGRRIDKIMATRSADAETAA

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=392, Percent_Identity=26.530612244898, Blast_Score=150, Evalue=3e-36,
Organism=Escherichia coli, GI1790664, Length=432, Percent_Identity=27.0833333333333, Blast_Score=190, Evalue=1e-49,
Organism=Escherichia coli, GI87082033, Length=266, Percent_Identity=31.5789473684211, Blast_Score=161, Evalue=8e-41,
Organism=Escherichia coli, GI145693175, Length=407, Percent_Identity=25.7985257985258, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1788119, Length=273, Percent_Identity=31.8681318681319, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1786879, Length=256, Percent_Identity=29.6875, Blast_Score=112, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 45964; Mature: 45964

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVELAIVVGLIVANGLLSMSELAIVSSRPARLALLAQKKVRGARQAMVLADDPGKFLS
CCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHEEEEEECCCCHHHH
TVQIGITLVGVLSGAFSGATLGQRLSEWLAELAVPFPDIIGFGLVVTLITYATLIVGELV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PKQVALRDPEAVAVKVAPAMTVIAKVSRPVVFILDLSGKAILKLLGQGGAAEEKISEEEI
HHHHHCCCCCEEEEEEHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCHHHCCHHHH
HNLVMEAETAGVLEPGEREMIAGVMRLGDRPVGAVMTPRPEVDSVDLADPPETIREAFLG
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHCC
SPHSRLPVTDGNRDDPIGIIQAKDMLEVYLRGDKPDLRALVRDAPVIPSSADARDVLATL
CCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHH
RKSSVHMALVYDEFGAFEGVVTTADILESIVGAFGSEDGPAEPAAVRREDGSYLIAGWMP
HHCCEEEEEEEEHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCC
VDEFGDLLPVPIPEHRDYHTVAGLILQHFGALPAVGDRFDYQGWRIEILDLDGRRIDKIM
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH
ATRSADAETAA
HHCCCCCCCCC
>Mature Secondary Structure
MLSVELAIVVGLIVANGLLSMSELAIVSSRPARLALLAQKKVRGARQAMVLADDPGKFLS
CCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHEEEEEECCCCHHHH
TVQIGITLVGVLSGAFSGATLGQRLSEWLAELAVPFPDIIGFGLVVTLITYATLIVGELV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PKQVALRDPEAVAVKVAPAMTVIAKVSRPVVFILDLSGKAILKLLGQGGAAEEKISEEEI
HHHHHCCCCCEEEEEEHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCHHHCCHHHH
HNLVMEAETAGVLEPGEREMIAGVMRLGDRPVGAVMTPRPEVDSVDLADPPETIREAFLG
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHCC
SPHSRLPVTDGNRDDPIGIIQAKDMLEVYLRGDKPDLRALVRDAPVIPSSADARDVLATL
CCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHH
RKSSVHMALVYDEFGAFEGVVTTADILESIVGAFGSEDGPAEPAAVRREDGSYLIAGWMP
HHCCEEEEEEEEHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCC
VDEFGDLLPVPIPEHRDYHTVAGLILQHFGALPAVGDRFDYQGWRIEILDLDGRRIDKIM
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH
ATRSADAETAA
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]