| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86749824
Identifier: 86749824
GI number: 86749824
Start: 3091517
End: 3092659
Strand: Direct
Name: 86749824
Synonym: RPB_2707
Alternate gene names: NA
Gene position: 3091517-3092659 (Clockwise)
Preceding gene: 86749823
Following gene: 86749827
Centisome position: 57.98
GC content: 68.33
Gene sequence:
>1143_bases ATGTTGCAGATCGAATCGTGTGAACGATCCATCGGATGGGCGGCGGCAGGCACGGAGCGGTACGTCGCCGAATGCACGCG CGACGTCGGCAGATTTCTCGCCCGCGCCGCCGCGCTCGGCCCGCAAGCGTCGGTGACGCCGTTTCAATCCGCGAACTGGC TGAGGCCCTGGCTGCAGGTGCTGGCGCCGTCGGCCGATGTCGAACCGCTGCTGATCACCGTCCGCGACAGCGTGCGCGGC GGGATCGCGATGCTGCTGCCCTTGGTGCTGCGGCGGTTCTACGGCGTGACGCTGGTCGAATTCGCCGATCTGTCCGTGTC CGACTACGGCTTTCCGCTGCTCGGCCCGGCGGCGCCGACGACGCCCGCCGCGGCCGCCGAAGCGTTCGAGGCGGCGATCG CGGCGATGCCGCCGGTCGATGTGATCCGGCTGTGTAATCTGCCACGCGTGGTCGGCGGCCAGGTCAATCCGCTGGCATTG CTGCCCGGGCTGTCGCCGGGTTCGGTGCGCAACGTGATGGCCCTGCCCGCCAGTTGGGACGACTACCTCGCCTCGCGCCC GCGCAAATTCCGCAAGGCGCTGCGCCAGCATCACCGCGCCTTCGACGCGCTCGGCGGCGTCTACACTCGAATGATCACCG ACGACGCCGAGGCGAGCCGCCTGCTCGATCGGCTCGACCATTTTCAGCGGGCGCGGATCGCGGCGCGCGGCAAGCGCTTC GTGCTCGACCAGCCGGCCTATTCGAATTTCTATCGCGAGGTCTACGAAGGCGGCCTCGCGCACCGCTTCGCGATGCTGTC GGTGCTGGAATCCGGCGGCAGCATCGTCGCGCTGGCCTACAGCCTGCTGCATCAGCAAACCTGCACCACGGTGCGGCTCG CGCATCTCGGCGAGCAATGGAGCCGCTGCTCGCCCGGCATCGTGCTGGCGAGCGAGATCATCCGCTGGCTGATCGAAAAC GGCGTGCGCAAATTCGATCTCGGCGCCGGCGGCTACGACTACAAGAAGCGGCTCGGCTGCGAGCCCGAGCAATTGTCGAC GCTGGAAAGACCGATGAGCATCAAGGGCCGGATGGCGCTGTCGGCATGGACGACGTTCGCCGGCCGGCGCTCGCTGCTTC AGTCGCTCGCCAGCGCGTCGTAG
Upstream 100 bases:
>100_bases CGAATCTGAACCGGATCAACGATAAAGGTCGCCGCGCGCGCCATTGTATTGCATGGATCGGGCTTCCTCCGATCCGGTGG CCGTGCCGAGTTGACATCCG
Downstream 100 bases:
>100_bases ACCAGCTTCTTGAACGCCGGCACGTCGCGCCCCCGCTGGCGCTCGGTCTGCTGCATCAGGATGGTGATCACCCCGAGTTT GGGATCGACGCCGAAATAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MLQIESCERSIGWAAAGTERYVAECTRDVGRFLARAAALGPQASVTPFQSANWLRPWLQVLAPSADVEPLLITVRDSVRG GIAMLLPLVLRRFYGVTLVEFADLSVSDYGFPLLGPAAPTTPAAAAEAFEAAIAAMPPVDVIRLCNLPRVVGGQVNPLAL LPGLSPGSVRNVMALPASWDDYLASRPRKFRKALRQHHRAFDALGGVYTRMITDDAEASRLLDRLDHFQRARIAARGKRF VLDQPAYSNFYREVYEGGLAHRFAMLSVLESGGSIVALAYSLLHQQTCTTVRLAHLGEQWSRCSPGIVLASEIIRWLIEN GVRKFDLGAGGYDYKKRLGCEPEQLSTLERPMSIKGRMALSAWTTFAGRRSLLQSLASAS
Sequences:
>Translated_380_residues MLQIESCERSIGWAAAGTERYVAECTRDVGRFLARAAALGPQASVTPFQSANWLRPWLQVLAPSADVEPLLITVRDSVRG GIAMLLPLVLRRFYGVTLVEFADLSVSDYGFPLLGPAAPTTPAAAAEAFEAAIAAMPPVDVIRLCNLPRVVGGQVNPLAL LPGLSPGSVRNVMALPASWDDYLASRPRKFRKALRQHHRAFDALGGVYTRMITDDAEASRLLDRLDHFQRARIAARGKRF VLDQPAYSNFYREVYEGGLAHRFAMLSVLESGGSIVALAYSLLHQQTCTTVRLAHLGEQWSRCSPGIVLASEIIRWLIEN GVRKFDLGAGGYDYKKRLGCEPEQLSTLERPMSIKGRMALSAWTTFAGRRSLLQSLASAS >Mature_380_residues MLQIESCERSIGWAAAGTERYVAECTRDVGRFLARAAALGPQASVTPFQSANWLRPWLQVLAPSADVEPLLITVRDSVRG GIAMLLPLVLRRFYGVTLVEFADLSVSDYGFPLLGPAAPTTPAAAAEAFEAAIAAMPPVDVIRLCNLPRVVGGQVNPLAL LPGLSPGSVRNVMALPASWDDYLASRPRKFRKALRQHHRAFDALGGVYTRMITDDAEASRLLDRLDHFQRARIAARGKRF VLDQPAYSNFYREVYEGGLAHRFAMLSVLESGGSIVALAYSLLHQQTCTTVRLAHLGEQWSRCSPGIVLASEIIRWLIEN GVRKFDLGAGGYDYKKRLGCEPEQLSTLERPMSIKGRMALSAWTTFAGRRSLLQSLASAS
Specific function: Unknown
COG id: COG5653
COG function: function code M; Protein involved in cellulose biosynthesis (CelD)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41597; Mature: 41597
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQIESCERSIGWAAAGTERYVAECTRDVGRFLARAAALGPQASVTPFQSANWLRPWLQV CCCCCCHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH LAPSADVEPLLITVRDSVRGGIAMLLPLVLRRFYGVTLVEFADLSVSDYGFPLLGPAAPT HCCCCCCCEEEEEECHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCC TPAAAAEAFEAAIAAMPPVDVIRLCNLPRVVGGQVNPLALLPGLSPGSVRNVMALPASWD CHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHCCCCCCEEEECCCCCCCCHHHEECCCCHH DYLASRPRKFRKALRQHHRAFDALGGVYTRMITDDAEASRLLDRLDHFQRARIAARGKRF HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEE VLDQPAYSNFYREVYEGGLAHRFAMLSVLESGGSIVALAYSLLHQQTCTTVRLAHLGEQW EECCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SRCSPGIVLASEIIRWLIENGVRKFDLGAGGYDYKKRLGCEPEQLSTLERPMSIKGRMAL HCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCHHHHHHHHCCCCCCCHHHH SAWTTFAGRRSLLQSLASAS HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLQIESCERSIGWAAAGTERYVAECTRDVGRFLARAAALGPQASVTPFQSANWLRPWLQV CCCCCCHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH LAPSADVEPLLITVRDSVRGGIAMLLPLVLRRFYGVTLVEFADLSVSDYGFPLLGPAAPT HCCCCCCCEEEEEECHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCC TPAAAAEAFEAAIAAMPPVDVIRLCNLPRVVGGQVNPLALLPGLSPGSVRNVMALPASWD CHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHCCCCCCEEEECCCCCCCCHHHEECCCCHH DYLASRPRKFRKALRQHHRAFDALGGVYTRMITDDAEASRLLDRLDHFQRARIAARGKRF HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEE VLDQPAYSNFYREVYEGGLAHRFAMLSVLESGGSIVALAYSLLHQQTCTTVRLAHLGEQW EECCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SRCSPGIVLASEIIRWLIENGVRKFDLGAGGYDYKKRLGCEPEQLSTLERPMSIKGRMAL HCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCHHHHHHHHCCCCCCCHHHH SAWTTFAGRRSLLQSLASAS HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA